RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 LOC102724159A0A0B4J2E5 919 aa10.61□□□□□ -0.71
SP140-201ENST00000343805 PWP2Q15269 919 aaKnown RBP10.61□□□□□ -0.71
SP140-201ENST00000343805 ZMYM3Q14202 1370 aa10.6□□□□□ -0.71
SP140-201ENST00000343805 KDM4AO75164 1064 aa10.6□□□□□ -0.71
SP140-201ENST00000343805 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
SP140-201ENST00000343805 TIGD1Q96MW7 591 aa10.6□□□□□ -0.71
SP140-201ENST00000343805 MYCBPQ99417 103 aaPredicted RBP10.6□□□□□ -0.71
SP140-201ENST00000343805 NEXMIFQ5QGS0 1516 aa10.6□□□□□ -0.71
SP140-201ENST00000343805 NBPF10Q6P3W6 841 aaKnown RBP10.6□□□□□ -0.71
SP140-201ENST00000343805 BEGAINQ9BUH8 593 aa10.6□□□□□ -0.71
SP140-201ENST00000343805 BSDC1Q9NW68 430 aaPredicted RBP10.6□□□□□ -0.71
SP140-201ENST00000343805 KIF3AQ9Y496 699 aa10.6□□□□□ -0.71
SP140-201ENST00000343805 NEURL4Q96JN8 1562 aa10.59□□□□□ -0.71
SP140-201ENST00000343805 FCHSD2O94868 740 aa10.59□□□□□ -0.71
SP140-201ENST00000343805 KRT24Q2M2I5 525 aa10.59□□□□□ -0.71
SP140-201ENST00000343805 PPP1R15BQ5SWA1 713 aa10.59□□□□□ -0.71
SP140-201ENST00000343805 ZNF500O60304 480 aaPredicted RBP10.59□□□□□ -0.71
SP140-201ENST00000343805 DSG2Q14126 1118 aa10.59□□□□□ -0.71
SP140-201ENST00000343805 PDIA6Q15084 440 aa10.59□□□□□ -0.71
SP140-201ENST00000343805 SND1Q7KZF4 910 aaKnown RBP eCLIP10.59□□□□□ -0.71
SP140-201ENST00000343805 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.59□□□□□ -0.71
SP140-201ENST00000343805 ANTXR1Q9H6X2 564 aa10.59□□□□□ -0.71
SP140-201ENST00000343805 KIF16BQ96L93 1317 aa10.59□□□□□ -0.71
SP140-201ENST00000343805 ARHGEF28Q8N1W1 1705 aaKnown RBP10.58□□□□□ -0.72
SP140-201ENST00000343805 CAPN2P17655 700 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 HDAC1Q13547 482 aaPredicted RBP10.58□□□□□ -0.72
SP140-201ENST00000343805 HS1BP3Q53T59 392 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 SIRT1Q96EB6 747 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 NCAPGQ9BPX3 1015 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 GRPEL1Q9HAV7 217 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 NLRP1Q9C000 1473 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 CHD1LQ86WJ1 897 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 SMC5Q8IY18 1101 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 C8orf58Q8NAV2 365 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 MBIPQ9NS73 344 aa10.58□□□□□ -0.72
SP140-201ENST00000343805 CT47B1P0C2W7 299 aaPredicted RBP10.57□□□□□ -0.72
SP140-201ENST00000343805 SH3D19Q5HYK7 790 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 HSCBQ8IWL3 235 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 OTUD6BQ8N6M0 293 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 PPP1R9BQ96SB3 815 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.57□□□□□ -0.72
SP140-201ENST00000343805 ZC3H13Q5T200 1668 aaKnown RBP10.57□□□□□ -0.72
SP140-201ENST00000343805 MYO5BQ9ULV0 1848 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 TRIM6-TRIM34B2RNG4 842 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 VAMP4O75379 141 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 CCDC172P0C7W6 258 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 NFE2L2Q16236 605 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 TWISTNBQ3B726 338 aaPredicted RBP10.57□□□□□ -0.72
SP140-201ENST00000343805 ZNF662Q6ZS27 426 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 ESF1Q9H501 851 aaKnown RBP10.57□□□□□ -0.72
SP140-201ENST00000343805 R3HCC1Q9Y3T6 440 aaKnown RBP10.57□□□□□ -0.72
SP140-201ENST00000343805 GABPB1Q06547 395 aaPredicted RBP10.57□□□□□ -0.72
SP140-201ENST00000343805 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
SP140-201ENST00000343805 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
SP140-201ENST00000343805 CT47A1Q5JQC4 288 aaPredicted RBP10.56□□□□□ -0.72
SP140-201ENST00000343805 SASS6Q6UVJ0 657 aa10.56□□□□□ -0.72
SP140-201ENST00000343805 MIS18AQ9NYP9 233 aa10.56□□□□□ -0.72
SP140-201ENST00000343805 PIK3C2BO00750 1634 aa10.56□□□□□ -0.72
SP140-201ENST00000343805 PTPRMP28827 1452 aa10.56□□□□□ -0.72
SP140-201ENST00000343805 GOLIM4O00461 696 aa10.56□□□□□ -0.72
SP140-201ENST00000343805 BRD1O95696 1058 aa10.56□□□□□ -0.72
SP140-201ENST00000343805 OSBPP22059 807 aa10.56□□□□□ -0.72
SP140-201ENST00000343805 COG3Q96JB2 828 aa10.56□□□□□ -0.72
SP140-201ENST00000343805 CD163L1Q9NR16 1453 aa10.55□□□□□ -0.72
SP140-201ENST00000343805 ZBTB7BO15156 539 aaPredicted RBP10.55□□□□□ -0.72
SP140-201ENST00000343805 HSP90AB1P08238 724 aaKnown RBP10.55□□□□□ -0.72
SP140-201ENST00000343805 NLRP6P59044 892 aa10.55□□□□□ -0.72
SP140-201ENST00000343805 NUCB1Q02818 461 aa10.55□□□□□ -0.72
SP140-201ENST00000343805 CTR9Q6PD62 1173 aa10.55□□□□□ -0.72
SP140-201ENST00000343805 NUDT16Q96DE0 195 aaKnown RBP10.55□□□□□ -0.72
SP140-201ENST00000343805 CBX1P83916 185 aa10.55□□□□□ -0.72
SP140-201ENST00000343805 RBM28Q9NW13 759 aaKnown RBP10.55□□□□□ -0.72
SP140-201ENST00000343805 MCM4P33991 863 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 ZKSCAN8Q15776 578 aaPredicted RBP10.54□□□□□ -0.72
SP140-201ENST00000343805 SULT6B1Q6IMI4 303 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 MCM10Q7L590 875 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 C16orf71Q8IYS4 520 aaPredicted RBP10.54□□□□□ -0.72
SP140-201ENST00000343805 MRPL50Q8N5N7 158 aaKnown RBP10.54□□□□□ -0.72
SP140-201ENST00000343805 RNF217Q8TC41 542 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 IL16Q14005 1332 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 DIP2CQ9Y2E4 1556 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
SP140-201ENST00000343805 GNAI1P63096 354 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 EP400NLQ6ZTU2 488 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 RFC5P40937 340 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 CCDC173Q0VFZ6 552 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 CALCOCO1Q9P1Z2 691 aa10.54□□□□□ -0.72
SP140-201ENST00000343805 RAD50Q92878 1312 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 COL3A1P02461 1466 aaPredicted RBP10.53□□□□□ -0.72
SP140-201ENST00000343805 IL13P35225 146 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 ALDH1L2Q3SY69 923 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 CHMP5Q9NZZ3 219 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 CD2BP2O95400 341 aaKnown RBP10.53□□□□□ -0.72
SP140-201ENST00000343805 NBPF6Q5VWK0 638 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 CASC1Q6TDU7 716 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 NBPF5PQ86XG9 351 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms