RNA–Protein interactions for RNA: ENST00000343217.6

DUSP28-201, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DUSP28, Length 1,555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-201ENST00000343217 C1orf141Q5JVX7 400 aa26.84■■□□□ 1.89
DUSP28-201ENST00000343217 ZNF428Q96B54 188 aa26.84■■□□□ 1.89
DUSP28-201ENST00000343217 BABAM1Q9NWV8 329 aa26.82■■□□□ 1.88
DUSP28-201ENST00000343217 SCN11AQ9UI33 1791 aa26.82■■□□□ 1.88
DUSP28-201ENST00000343217 ATP6V1AP38606 617 aa26.81■■□□□ 1.88
DUSP28-201ENST00000343217 RARSP54136 660 aaKnown RBP26.81■■□□□ 1.88
DUSP28-201ENST00000343217 IRX6P78412 446 aaPredicted RBP26.81■■□□□ 1.88
DUSP28-201ENST00000343217 CHD4Q14839 1912 aa26.81■■□□□ 1.88
DUSP28-201ENST00000343217 CEMIPQ8WUJ3 1361 aa26.81■■□□□ 1.88
DUSP28-201ENST00000343217 SSFA2P28290 1259 aa26.8■■□□□ 1.88
DUSP28-201ENST00000343217 MSL1Q68DK7 614 aa26.8■■□□□ 1.88
DUSP28-201ENST00000343217 IL17REQ8NFR9 667 aa26.8■■□□□ 1.88
DUSP28-201ENST00000343217 COL5A3P25940 1745 aaPredicted RBP26.79■■□□□ 1.88
DUSP28-201ENST00000343217 KLHL34Q8N239 644 aa26.79■■□□□ 1.88
DUSP28-201ENST00000343217 SLC4A9Q96Q91 983 aa26.79■■□□□ 1.88
DUSP28-201ENST00000343217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.78■■□□□ 1.88
DUSP28-201ENST00000343217 CABP4P57796 275 aa26.78■■□□□ 1.88
DUSP28-201ENST00000343217 SMIM5Q71RC9 77 aa26.77■■□□□ 1.88
DUSP28-201ENST00000343217 VIRMAQ69YN4 1812 aaKnown RBP26.77■■□□□ 1.88
DUSP28-201ENST00000343217 PHF14O94880 888 aa26.76■■□□□ 1.87
DUSP28-201ENST00000343217 BCAR3O75815 825 aa26.75■■□□□ 1.87
DUSP28-201ENST00000343217 TAF7Q15545 349 aaPredicted RBP26.75■■□□□ 1.87
DUSP28-201ENST00000343217 NLGN2Q8NFZ4 835 aa26.75■■□□□ 1.87
DUSP28-201ENST00000343217 ADAMTS7Q9UKP4 1686 aa26.75■■□□□ 1.87
DUSP28-201ENST00000343217 ALDH1L2Q3SY69 923 aa26.75■■□□□ 1.87
DUSP28-201ENST00000343217 TSPYL4Q9UJ04 414 aa26.75■■□□□ 1.87
DUSP28-201ENST00000343217 GOLGB1Q14789 3259 aaKnown RBP26.74■■□□□ 1.87
DUSP28-201ENST00000343217 GNPATO15228 680 aa26.74■■□□□ 1.87
DUSP28-201ENST00000343217 NFATC2IPQ8NCF5 419 aa26.73■■□□□ 1.87
DUSP28-201ENST00000343217 RBM42Q9BTD8 480 aaKnown RBP26.73■■□□□ 1.87
DUSP28-201ENST00000343217 MYH14Q7Z406 1995 aaKnown RBP26.73■■□□□ 1.87
DUSP28-201ENST00000343217 RNMTO43148 476 aaKnown RBP26.72■■□□□ 1.87
DUSP28-201ENST00000343217 PLIN1O60240 522 aa26.72■■□□□ 1.87
DUSP28-201ENST00000343217 TWISTNBQ3B726 338 aaPredicted RBP26.72■■□□□ 1.87
DUSP28-201ENST00000343217 VAMP4O75379 141 aa26.71■■□□□ 1.87
DUSP28-201ENST00000343217 TEFQ10587 303 aa26.71■■□□□ 1.87
DUSP28-201ENST00000343217 CICQ96RK0 1608 aaPredicted RBP26.71■■□□□ 1.87
DUSP28-201ENST00000343217 GPR162Q16538 588 aa26.71■■□□□ 1.87
DUSP28-201ENST00000343217 RC3H1Q5TC82 1133 aaKnown RBP26.71■■□□□ 1.87
DUSP28-201ENST00000343217 LGR6Q9HBX8 967 aa26.71■■□□□ 1.87
DUSP28-201ENST00000343217 MRC1P22897 1456 aa26.7■■□□□ 1.86
DUSP28-201ENST00000343217 CANXP27824 592 aaKnown RBP26.69■■□□□ 1.86
DUSP28-201ENST00000343217 C8orf58Q8NAV2 365 aa26.69■■□□□ 1.86
DUSP28-201ENST00000343217 SMC4Q9NTJ3 1288 aa26.69■■□□□ 1.86
DUSP28-201ENST00000343217 CD2APQ9Y5K6 639 aa26.69■■□□□ 1.86
DUSP28-201ENST00000343217 CNTNAP4Q9C0A0 1308 aa26.69■■□□□ 1.86
DUSP28-201ENST00000343217 BRPF1P55201 1214 aaPredicted RBP26.68■■□□□ 1.86
DUSP28-201ENST00000343217 SSH1Q8WYL5 1049 aa26.68■■□□□ 1.86
DUSP28-201ENST00000343217 SOS1Q07889 1333 aaPredicted RBP26.68■■□□□ 1.86
DUSP28-201ENST00000343217 TJP1Q07157 1748 aa26.67■■□□□ 1.86
DUSP28-201ENST00000343217 PDE3AQ14432 1141 aa26.67■■□□□ 1.86
DUSP28-201ENST00000343217 TSPYL6Q8N831 410 aa26.67■■□□□ 1.86
DUSP28-201ENST00000343217 PPP4R2Q9NY27 417 aa26.67■■□□□ 1.86
DUSP28-201ENST00000343217 RTCBQ9Y3I0 505 aaKnown RBP26.67■■□□□ 1.86
DUSP28-201ENST00000343217 SLC52A2Q9HAB3 445 aa26.67■■□□□ 1.86
DUSP28-201ENST00000343217 MIS18AQ9NYP9 233 aa26.67■■□□□ 1.86
DUSP28-201ENST00000343217 KIF16BQ96L93 1317 aa26.66■■□□□ 1.86
DUSP28-201ENST00000343217 PTCD1O75127 700 aaKnown RBP26.66■■□□□ 1.86
DUSP28-201ENST00000343217 SIPA1L3O60292 1781 aaPredicted RBP26.66■■□□□ 1.86
DUSP28-201ENST00000343217 KDM3BQ7LBC6 1761 aa26.65■■□□□ 1.86
DUSP28-201ENST00000343217 BCL2L13Q9BXK5 485 aa26.65■■□□□ 1.86
DUSP28-201ENST00000343217 RPS6KA4O75676 772 aa26.64■■□□□ 1.86
DUSP28-201ENST00000343217 MS4A1P11836 297 aa26.64■■□□□ 1.86
DUSP28-201ENST00000343217 ADRA2BP18089 450 aa26.64■■□□□ 1.86
DUSP28-201ENST00000343217 TRAPPC3LQ5T215 181 aa26.64■■□□□ 1.86
DUSP28-201ENST00000343217 C4AP0C0L4 1744 aa26.64■■□□□ 1.85
DUSP28-201ENST00000343217 ELL2O00472 640 aaPredicted RBP26.63■■□□□ 1.85
DUSP28-201ENST00000343217 FRAT1Q92837 279 aaPredicted RBP26.63■■□□□ 1.85
DUSP28-201ENST00000343217 PELP1Q8IZL8 1130 aaKnown RBP26.63■■□□□ 1.85
DUSP28-201ENST00000343217 BTBD11A6QL63 1104 aa26.62■■□□□ 1.85
DUSP28-201ENST00000343217 IPO8O15397 1037 aaKnown RBP26.62■■□□□ 1.85
DUSP28-201ENST00000343217 YBX3P16989 372 aaKnown RBP eCLIP26.62■■□□□ 1.85
DUSP28-201ENST00000343217 ZKSCAN2Q63HK3 967 aa26.62■■□□□ 1.85
DUSP28-201ENST00000343217 ARHGEF1Q92888 912 aaKnown RBP26.62■■□□□ 1.85
DUSP28-201ENST00000343217 C20orf194Q5TEA3 1177 aa26.6■■□□□ 1.85
DUSP28-201ENST00000343217 ZNF784Q8NCA9 323 aaPredicted RBP26.6■■□□□ 1.85
DUSP28-201ENST00000343217 CRKLP46109 303 aaKnown RBP26.59■■□□□ 1.85
DUSP28-201ENST00000343217 EXOC6Q8TAG9 804 aa26.59■■□□□ 1.85
DUSP28-201ENST00000343217 CHMP4AQ9BY43 222 aa26.59■■□□□ 1.85
DUSP28-201ENST00000343217 KIF13BQ9NQT8 1826 aa26.59■■□□□ 1.85
DUSP28-201ENST00000343217 KCPQ6ZWJ8 1503 aa26.58■■□□□ 1.85
DUSP28-201ENST00000343217 GRIN3BO60391 1043 aa26.58■■□□□ 1.85
DUSP28-201ENST00000343217 KRT24Q2M2I5 525 aa26.58■■□□□ 1.85
DUSP28-201ENST00000343217 NLGN1Q8N2Q7 840 aa26.58■■□□□ 1.85
DUSP28-201ENST00000343217 MRPL50Q8N5N7 158 aaKnown RBP26.58■■□□□ 1.85
DUSP28-201ENST00000343217 CRBNQ96SW2 442 aa26.58■■□□□ 1.85
DUSP28-201ENST00000343217 MMP10P09238 476 aa26.57■■□□□ 1.84
DUSP28-201ENST00000343217 HOXB7P09629 217 aa26.57■■□□□ 1.84
DUSP28-201ENST00000343217 UBR2Q8IWV8 1755 aa26.57■■□□□ 1.84
DUSP28-201ENST00000343217 GYS1P13807 737 aa26.56■■□□□ 1.84
DUSP28-201ENST00000343217 RFC4P35249 363 aa26.56■■□□□ 1.84
DUSP28-201ENST00000343217 ARHGAP45Q92619 1136 aa26.56■■□□□ 1.84
DUSP28-201ENST00000343217 EIF4A1P60842 406 aaKnown RBP26.55■■□□□ 1.84
DUSP28-201ENST00000343217 SLC39A6Q13433 755 aa26.55■■□□□ 1.84
DUSP28-201ENST00000343217 ATF7IPQ6VMQ6 1270 aa26.55■■□□□ 1.84
DUSP28-201ENST00000343217 NOB1Q9ULX3 412 aaKnown RBP26.55■■□□□ 1.84
DUSP28-201ENST00000343217 INTS5Q6P9B9 1019 aaKnown RBP26.54■■□□□ 1.84
DUSP28-201ENST00000343217 DNAJC10Q8IXB1 793 aa26.54■■□□□ 1.84
DUSP28-201ENST00000343217 KIAA1551Q9HCM1 1747 aa26.53■■□□□ 1.84
DUSP28-201ENST00000343217 FTSJ3Q8IY81 847 aaKnown RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms