RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 PHF20L1A8MW92 1017 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 CENPBP07199 599 aaPredicted RBP3.48□□□□□ -1.85
CCDC30-201ENST00000340612 ATP2B4P23634 1241 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 SERPINB4P48594 390 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 GAS6Q14393 721 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 NPM2Q86SE8 214 aaKnown RBP3.48□□□□□ -1.85
CCDC30-201ENST00000340612 TRMT44Q8IYL2 757 aaKnown RBP3.48□□□□□ -1.85
CCDC30-201ENST00000340612 ZNF428Q96B54 188 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 PCDHGA11Q9Y5H2 935 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 SSFA2P28290 1259 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 ATP1A2P50993 1020 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 SV2AQ7L0J3 742 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 TRIM50Q86XT4 487 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 CYLDQ9NQC7 956 aa3.48□□□□□ -1.85
CCDC30-201ENST00000340612 GRM5P41594 1212 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 RNF20Q5VTR2 975 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 BEND7Q8N7W2 519 aaPredicted RBP3.47□□□□□ -1.85
CCDC30-201ENST00000340612 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.47□□□□□ -1.85
CCDC30-201ENST00000340612 TSEN2Q8NCE0 465 aaKnown RBP3.47□□□□□ -1.85
CCDC30-201ENST00000340612 LZTS3O60299 673 aaPredicted RBP3.47□□□□□ -1.85
CCDC30-201ENST00000340612 SEC13P55735 322 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 SRSF11Q05519 484 aaKnown RBP3.47□□□□□ -1.85
CCDC30-201ENST00000340612 CAPN12Q6ZSI9 719 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 SIX5Q8N196 739 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 LARGE2Q8N3Y3 721 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 CLP1Q92989 425 aaKnown RBP3.47□□□□□ -1.85
CCDC30-201ENST00000340612 HINFPQ9BQA5 517 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 MKNK1Q9BUB5 465 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 USP4Q13107 963 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 RGS22Q8NE09 1264 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 CDK15Q96Q40 435 aa3.47□□□□□ -1.85
CCDC30-201ENST00000340612 TXNDC2Q86VQ3 553 aa3.46□□□□□ -1.86
CCDC30-201ENST00000340612 ZNF784Q8NCA9 323 aaPredicted RBP3.46□□□□□ -1.86
CCDC30-201ENST00000340612 ANO2Q9NQ90 1003 aa3.46□□□□□ -1.86
CCDC30-201ENST00000340612 RAB6BQ9NRW1 208 aa3.46□□□□□ -1.86
CCDC30-201ENST00000340612 OCLNQ16625 522 aa3.46□□□□□ -1.86
CCDC30-201ENST00000340612 SND1Q7KZF4 910 aaKnown RBP eCLIP3.46□□□□□ -1.86
CCDC30-201ENST00000340612 SEPT12Q8IYM1 358 aa3.46□□□□□ -1.86
CCDC30-201ENST00000340612 OSBPL3Q9H4L5 887 aa3.46□□□□□ -1.86
CCDC30-201ENST00000340612 SERTAD1Q9UHV2 236 aa3.46□□□□□ -1.86
CCDC30-201ENST00000340612 TMEM229AB2RXF0 380 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 MYCP01106 439 aaPredicted RBP3.45□□□□□ -1.86
CCDC30-201ENST00000340612 ZNF211Q13398 564 aaPredicted RBP3.45□□□□□ -1.86
CCDC30-201ENST00000340612 SWI5Q1ZZU3 235 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 TBCELQ5QJ74 424 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 NEDD1Q8NHV4 660 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 ENAMQ9NRM1 1142 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 CUEDC1Q9NWM3 386 aaPredicted RBP3.45□□□□□ -1.86
CCDC30-201ENST00000340612 SEPT3Q9UH03 358 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 CDV3Q9UKY7 258 aaKnown RBP3.45□□□□□ -1.86
CCDC30-201ENST00000340612 RBM19Q9Y4C8 960 aaKnown RBP3.45□□□□□ -1.86
CCDC30-201ENST00000340612 MAP4K5Q9Y4K4 846 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 ABL1P00519 1130 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 ADD1P35611 737 aaKnown RBP3.45□□□□□ -1.86
CCDC30-201ENST00000340612 SCNN1DP51172 638 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 ERVK-9P63128 1117 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 MTMR3Q13615 1198 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 CCDC27Q2M243 656 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 PPP1R26Q5T8A7 1209 aaPredicted RBP3.45□□□□□ -1.86
CCDC30-201ENST00000340612 B4GALNT3Q6L9W6 998 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 PODNQ7Z5L7 613 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 TSEN34Q9BSV6 310 aaKnown RBP3.45□□□□□ -1.86
CCDC30-201ENST00000340612 ZNF358Q9NW07 568 aa3.45□□□□□ -1.86
CCDC30-201ENST00000340612 SENP3-EIF4A1A0A087X0R7 540 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 PATL2C9JE40 543 aaKnown RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 SNRPNP63162 240 aaKnown RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 NR5A1Q13285 461 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 FKBP5Q13451 457 aaPredicted RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 ZMYM1Q5SVZ6 1142 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 CC2D2BQ6DHV5 1058 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 TNS4Q8IZW8 715 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 CCER1Q8TC90 406 aaPredicted RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 PKNOX2Q96KN3 472 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 CXXC1Q9P0U4 656 aaPredicted RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 GNEQ9Y223 722 aaKnown RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 LILRA1O75019 489 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 COL8A1P27658 744 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 ARID4AP29374 1257 aaPredicted RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 GDF10P55107 478 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 CCDC116Q8IYX3 515 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 CHMP7Q8WUX9 453 aaPredicted RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 SIRT1Q96EB6 747 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 ESF1Q9H501 851 aaKnown RBP3.44□□□□□ -1.86
CCDC30-201ENST00000340612 ETNK1Q9HBU6 452 aa3.44□□□□□ -1.86
CCDC30-201ENST00000340612 CBLBQ13191 982 aa3.43□□□□□ -1.86
CCDC30-201ENST00000340612 NAA30Q147X3 362 aaPredicted RBP3.43□□□□□ -1.86
CCDC30-201ENST00000340612 FOXD4L6Q3SYB3 417 aaPredicted RBP3.43□□□□□ -1.86
CCDC30-201ENST00000340612 FOXD4L3Q6VB84 417 aaPredicted RBP3.43□□□□□ -1.86
CCDC30-201ENST00000340612 RBM25P49756 843 aaKnown RBP3.43□□□□□ -1.86
CCDC30-201ENST00000340612 TSPAN10Q9H1Z9 355 aaPredicted RBP3.43□□□□□ -1.86
CCDC30-201ENST00000340612 SEMA6BQ9H3T3 888 aa3.43□□□□□ -1.86
CCDC30-201ENST00000340612 ARHGEF10LQ9HCE6 1279 aa3.43□□□□□ -1.86
CCDC30-201ENST00000340612 BIN2Q9UBW5 565 aaPredicted RBP3.43□□□□□ -1.86
CCDC30-201ENST00000340612 SOWAHDA6NJG2 315 aa3.42□□□□□ -1.86
CCDC30-201ENST00000340612 H3BRB1 525 aa3.42□□□□□ -1.86
CCDC30-201ENST00000340612 GPR25O00155 361 aa3.42□□□□□ -1.86
CCDC30-201ENST00000340612 BCRP11274 1271 aa3.42□□□□□ -1.86
CCDC30-201ENST00000340612 CTSOP43234 321 aaPredicted RBP3.42□□□□□ -1.86
CCDC30-201ENST00000340612 SCG3Q8WXD2 468 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms