RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 FLIIQ13045 1269 aa9.07□□□□□ -0.96
NUP43-201ENST00000340413 AFDNP55196 1824 aaKnown RBP9.07□□□□□ -0.96
NUP43-201ENST00000340413 TAF1LQ8IZX4 1826 aa9.07□□□□□ -0.96
NUP43-201ENST00000340413 ZBTB7BO15156 539 aaPredicted RBP9.07□□□□□ -0.96
NUP43-201ENST00000340413 USP21Q9UK80 565 aa9.07□□□□□ -0.96
NUP43-201ENST00000340413 EIF5BO60841 1220 aaKnown RBP9.06□□□□□ -0.96
NUP43-201ENST00000340413 NGLY1Q96IV0 654 aa9.06□□□□□ -0.96
NUP43-201ENST00000340413 SLC4A2P04920 1241 aa9.06□□□□□ -0.96
NUP43-201ENST00000340413 GCC1Q96CN9 775 aa9.06□□□□□ -0.96
NUP43-201ENST00000340413 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
NUP43-201ENST00000340413 LRP10Q7Z4F1 713 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 TMEM57Q8N5G2 664 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 NFATC2IPQ8NCF5 419 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 FBXO41Q8TF61 875 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 KSR2Q6VAB6 950 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 C20orf194Q5TEA3 1177 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 COL24A1Q17RW2 1714 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 AFF2P51816 1311 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 PDIA6Q15084 440 aa9.05□□□□□ -0.96
NUP43-201ENST00000340413 FRAT1Q92837 279 aaPredicted RBP9.05□□□□□ -0.96
NUP43-201ENST00000340413 ADCY9O60503 1353 aa9.04□□□□□ -0.96
NUP43-201ENST00000340413 BRWD3Q6RI45 1802 aa9.04□□□□□ -0.96
NUP43-201ENST00000340413 TCERG1O14776 1098 aaKnown RBP9.04□□□□□ -0.96
NUP43-201ENST00000340413 RLBP1P12271 317 aa9.04□□□□□ -0.96
NUP43-201ENST00000340413 PLIN1O60240 522 aa9.04□□□□□ -0.96
NUP43-201ENST00000340413 ADAMTS2O95450 1211 aa9.04□□□□□ -0.96
NUP43-201ENST00000340413 TRIM28Q13263 835 aaKnown RBP9.04□□□□□ -0.96
NUP43-201ENST00000340413 MTX1Q13505 466 aa9.04□□□□□ -0.96
NUP43-201ENST00000340413 RC3H1Q5TC82 1133 aaKnown RBP9.04□□□□□ -0.96
NUP43-201ENST00000340413 MEX3CQ5U5Q3 659 aaKnown RBP9.04□□□□□ -0.96
NUP43-201ENST00000340413 SMC5Q8IY18 1101 aa9.04□□□□□ -0.96
NUP43-201ENST00000340413 ZNF496Q96IT1 587 aaPredicted RBP9.04□□□□□ -0.96
NUP43-201ENST00000340413 CNTNAP4Q9C0A0 1308 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 STARD3NLO95772 234 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 PANK1Q8TE04 598 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 ATG3Q9NT62 314 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 HMMRO75330 724 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 ANKRD44Q8N8A2 993 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 LINS1Q8NG48 757 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 PLBD2Q8NHP8 589 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 DNAAF4Q8WXU2 420 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 TNS1Q9HBL0 1735 aaKnown RBP9.03□□□□□ -0.96
NUP43-201ENST00000340413 A0A087WZG4 1122 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 ERVV-1B6SEH8 477 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 HSP90AB3PQ58FF7 597 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 MARCH10Q8NA82 808 aaPredicted RBP9.03□□□□□ -0.96
NUP43-201ENST00000340413 PIGBQ92521 554 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 COG6Q9Y2V7 657 aa9.03□□□□□ -0.96
NUP43-201ENST00000340413 ITPRIPQ8IWB1 547 aa9.02□□□□□ -0.97
NUP43-201ENST00000340413 AK7Q96M32 723 aa9.02□□□□□ -0.97
NUP43-201ENST00000340413 C8orf37Q96NL8 207 aa9.02□□□□□ -0.97
NUP43-201ENST00000340413 NUTM2BA6NNL0 878 aaPredicted RBP9.02□□□□□ -0.97
NUP43-201ENST00000340413 NUTM2EB1AL46 878 aaPredicted RBP9.02□□□□□ -0.97
NUP43-201ENST00000340413 IL6STP40189 918 aaPredicted RBP9.02□□□□□ -0.97
NUP43-201ENST00000340413 BEND3Q5T5X7 828 aa9.02□□□□□ -0.97
NUP43-201ENST00000340413 NUTM2AQ8IVF1 878 aaPredicted RBP9.02□□□□□ -0.97
NUP43-201ENST00000340413 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
NUP43-201ENST00000340413 RIC1Q4ADV7 1423 aa9.02□□□□□ -0.97
NUP43-201ENST00000340413 METTL22Q9BUU2 404 aaPredicted RBP9.02□□□□□ -0.97
NUP43-201ENST00000340413 CHPF2Q9P2E5 772 aa9.02□□□□□ -0.97
NUP43-201ENST00000340413 MIS18AQ9NYP9 233 aa9.01□□□□□ -0.97
NUP43-201ENST00000340413 KCNQ3O43525 872 aa9.01□□□□□ -0.97
NUP43-201ENST00000340413 RBM6P78332 1123 aaKnown RBP9.01□□□□□ -0.97
NUP43-201ENST00000340413 TICAM2Q86XR7 235 aa9.01□□□□□ -0.97
NUP43-201ENST00000340413 GNAI2P04899 355 aa9.01□□□□□ -0.97
NUP43-201ENST00000340413 FKBP5Q13451 457 aaPredicted RBP9.01□□□□□ -0.97
NUP43-201ENST00000340413 NUP98P52948 1817 aa9□□□□□ -0.97
NUP43-201ENST00000340413 C4BP0C0L5 1744 aa9□□□□□ -0.97
NUP43-201ENST00000340413 DDX54Q8TDD1 881 aaKnown RBP9□□□□□ -0.97
NUP43-201ENST00000340413 LRP5O75197 1615 aa9□□□□□ -0.97
NUP43-201ENST00000340413 TUBGCP6Q96RT7 1819 aa9□□□□□ -0.97
NUP43-201ENST00000340413 SENP3-EIF4A1A0A087X0R7 540 aa9□□□□□ -0.97
NUP43-201ENST00000340413 NEXNQ0ZGT2 675 aa9□□□□□ -0.97
NUP43-201ENST00000340413 KRT24Q2M2I5 525 aa9□□□□□ -0.97
NUP43-201ENST00000340413 HSP90B1P14625 803 aaKnown RBP9□□□□□ -0.97
NUP43-201ENST00000340413 BCL2L13Q9BXK5 485 aa9□□□□□ -0.97
NUP43-201ENST00000340413 AOX1Q06278 1338 aa9□□□□□ -0.97
NUP43-201ENST00000340413 PALLDQ8WX93 1383 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 CYP19A1P11511 503 aaPredicted RBP8.99□□□□□ -0.97
NUP43-201ENST00000340413 HSP90AB4PQ58FF6 505 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 BCL11BQ9C0K0 894 aaPredicted RBP8.99□□□□□ -0.97
NUP43-201ENST00000340413 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 MYH3P11055 1940 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 RAB11FIP3O75154 756 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 FAM196AQ6ZSG2 479 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 PLA2G12BQ9BX93 195 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 DCTPP1Q9H773 170 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 CDHR2Q9BYE9 1310 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 SLC27A3Q5K4L6 730 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 G2E3Q7L622 706 aa8.99□□□□□ -0.97
NUP43-201ENST00000340413 DDX60Q8IY21 1712 aaKnown RBP8.98□□□□□ -0.97
NUP43-201ENST00000340413 ATP8B2P98198 1209 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 POLA2Q14181 598 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 CCDC191Q8NCU4 936 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 ZBTB22O15209 634 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 PCDHB15Q9Y5E8 787 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 C4AP0C0L4 1744 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 ELL2O00472 640 aaPredicted RBP8.98□□□□□ -0.97
NUP43-201ENST00000340413 ADRA2BP18089 450 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 CEP85Q6P2H3 762 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms