RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 MSH6P52701 1360 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 NUTM2FA1L443 756 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 FIBPO43427 364 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 COL9A3Q14050 684 aaPredicted RBP11.07□□□□□ -0.64
RPGR-202ENST00000339363 KRBA2Q6ZNG9 492 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 CCDC191Q8NCU4 936 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 GCC1Q96CN9 775 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 DCTPP1Q9H773 170 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
RPGR-202ENST00000339363 GORABQ5T7V8 394 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 CEP85Q6P2H3 762 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 CLEC17AQ6ZS10 378 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 NSD2O96028 1365 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 POGZQ7Z3K3 1410 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 DLG5Q8TDM6 1919 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
RPGR-202ENST00000339363 BMS1Q14692 1282 aaKnown RBP11.06□□□□□ -0.64
RPGR-202ENST00000339363 CCDC186Q7Z3E2 898 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 EFCC1Q9HA90 598 aa11.06□□□□□ -0.64
RPGR-202ENST00000339363 TPM4P67936 248 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 SLC20A2Q08357 652 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 KIAA1524Q8TCG1 905 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 MYCBPQ99417 103 aaPredicted RBP11.05□□□□□ -0.64
RPGR-202ENST00000339363 ARAP3Q8WWN8 1544 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 KDM4AO75164 1064 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 EXOC6BQ9Y2D4 811 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 CEP135Q66GS9 1140 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 GIMAP6Q6P9H5 292 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 NECTIN2Q92692 538 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 CFAP44Q96MT7 982 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 PAXBP1Q9Y5B6 917 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 ARHGEF40Q8TER5 1519 aa11.05□□□□□ -0.64
RPGR-202ENST00000339363 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
RPGR-202ENST00000339363 ELF2Q15723 593 aa11.04□□□□□ -0.64
RPGR-202ENST00000339363 CCDC183Q5T5S1 534 aa11.04□□□□□ -0.64
RPGR-202ENST00000339363 UPF3BQ9BZI7 483 aaKnown RBP11.04□□□□□ -0.64
RPGR-202ENST00000339363 LRRFIP2Q9Y608 721 aaKnown RBP11.04□□□□□ -0.64
RPGR-202ENST00000339363 HECW2Q9P2P5 1572 aa11.04□□□□□ -0.64
RPGR-202ENST00000339363 CPS1P31327 1500 aa11.04□□□□□ -0.64
RPGR-202ENST00000339363 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
RPGR-202ENST00000339363 SKIDA1Q1XH10 827 aa11.04□□□□□ -0.64
RPGR-202ENST00000339363 INTS3Q68E01 1043 aaKnown RBP11.04□□□□□ -0.64
RPGR-202ENST00000339363 ARGLU1Q9NWB6 273 aaPredicted RBP11.04□□□□□ -0.64
RPGR-202ENST00000339363 TRMT1Q9NXH9 659 aaKnown RBP11.04□□□□□ -0.64
RPGR-202ENST00000339363 YEATS2Q9ULM3 1422 aa11.04□□□□□ -0.64
RPGR-202ENST00000339363 TERF2IPQ9NYB0 399 aa11.04□□□□□ -0.64
RPGR-202ENST00000339363 MORC2Q9Y6X9 1032 aaPredicted RBP11.04□□□□□ -0.64
RPGR-202ENST00000339363 GNL2Q13823 731 aaKnown RBP11.03□□□□□ -0.64
RPGR-202ENST00000339363 PTPN14Q15678 1187 aa11.03□□□□□ -0.64
RPGR-202ENST00000339363 NCBP3Q53F19 620 aaKnown RBP11.03□□□□□ -0.64
RPGR-202ENST00000339363 CTR9Q6PD62 1173 aa11.03□□□□□ -0.64
RPGR-202ENST00000339363 SPTLC3Q9NUV7 552 aa11.03□□□□□ -0.64
RPGR-202ENST00000339363 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
RPGR-202ENST00000339363 TXLNBQ8N3L3 684 aa11.03□□□□□ -0.64
RPGR-202ENST00000339363 RTL1A6NKG5 1358 aa11.03□□□□□ -0.64
RPGR-202ENST00000339363 MAP4K4O95819 1239 aaPredicted RBP11.03□□□□□ -0.64
RPGR-202ENST00000339363 MCCP23508 829 aa11.03□□□□□ -0.64
RPGR-202ENST00000339363 USP48Q86UV5 1035 aa11.03□□□□□ -0.64
RPGR-202ENST00000339363 EP400NLQ6ZTU2 488 aa11.02□□□□□ -0.64
RPGR-202ENST00000339363 ZNF428Q96B54 188 aa11.02□□□□□ -0.64
RPGR-202ENST00000339363 TMX3Q96JJ7 454 aa11.02□□□□□ -0.64
RPGR-202ENST00000339363 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.64
RPGR-202ENST00000339363 REC8O95072 547 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 GYS2P54840 703 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 LRMPQ12912 555 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 SLC4A10Q6U841 1118 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 SYT10Q6XYQ8 523 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 RIMS2Q9UQ26 1411 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 PNMA6EA0A0J9YXQ4 647 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 ANKRD44Q8N8A2 993 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 AK7Q96M32 723 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 SLC26A8Q96RN1 970 aa11.02□□□□□ -0.65
RPGR-202ENST00000339363 TRIM66O15016 1216 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 CPA1P15085 419 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 LMAN1P49257 510 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 TMCO3Q6UWJ1 677 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 LEKR1Q6ZMV7 388 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 ARHGAP45Q92619 1136 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 CCDC192P0DO97 292 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 ICE2Q659A1 982 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
RPGR-202ENST00000339363 DHX16O60231 1041 aaKnown RBP11□□□□□ -0.65
RPGR-202ENST00000339363 SULT6B1Q6IMI4 303 aa11□□□□□ -0.65
RPGR-202ENST00000339363 TXNDC2Q86VQ3 553 aa11□□□□□ -0.65
RPGR-202ENST00000339363 AP5Z1O43299 807 aa11□□□□□ -0.65
RPGR-202ENST00000339363 CTIFO43310 598 aaKnown RBP11□□□□□ -0.65
RPGR-202ENST00000339363 CASQ1P31415 396 aa11□□□□□ -0.65
RPGR-202ENST00000339363 KMT5BQ4FZB7 885 aa11□□□□□ -0.65
RPGR-202ENST00000339363 HSP90AB2PQ58FF8 381 aa11□□□□□ -0.65
RPGR-202ENST00000339363 HOMER1Q86YM7 354 aa11□□□□□ -0.65
RPGR-202ENST00000339363 MNS1Q8NEH6 495 aa11□□□□□ -0.65
RPGR-202ENST00000339363 ZNF622Q969S3 477 aaKnown RBP eCLIP11□□□□□ -0.65
RPGR-202ENST00000339363 GEMIN8Q9NWZ8 242 aaKnown RBP11□□□□□ -0.65
RPGR-202ENST00000339363 ANKRD26Q9UPS8 1709 aa11□□□□□ -0.65
RPGR-202ENST00000339363 TCHHQ07283 1943 aa11□□□□□ -0.65
RPGR-202ENST00000339363 GNAI1P63096 354 aa11□□□□□ -0.65
RPGR-202ENST00000339363 TTC31Q49AM3 519 aaPredicted RBP11□□□□□ -0.65
RPGR-202ENST00000339363 CCAR2Q8N163 923 aaKnown RBP11□□□□□ -0.65
RPGR-202ENST00000339363 ZSCAN21Q9Y5A6 473 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms