RNA–Protein interactions for RNA: ENST00000337303.8

PBRM1-202, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-202ENST00000337303 IFFO1Q0D2I5 559 aa7.89□□□□□ -1.15
PBRM1-202ENST00000337303 HDAC1Q13547 482 aaPredicted RBP7.89□□□□□ -1.15
PBRM1-202ENST00000337303 SMC1AQ14683 1233 aaKnown RBP7.89□□□□□ -1.15
PBRM1-202ENST00000337303 CACNA2D4Q7Z3S7 1137 aa7.89□□□□□ -1.15
PBRM1-202ENST00000337303 RBM42Q9BTD8 480 aaKnown RBP7.89□□□□□ -1.15
PBRM1-202ENST00000337303 BICRAQ9NZM4 1560 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 FGFR1OPO95684 399 aaKnown RBP7.88□□□□□ -1.15
PBRM1-202ENST00000337303 IGHDP01880 384 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 TUBB4AP04350 444 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 GJB2P29033 226 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 RRS1Q15050 365 aaKnown RBP7.88□□□□□ -1.15
PBRM1-202ENST00000337303 RNF187Q5TA31 235 aaPredicted RBP7.88□□□□□ -1.15
PBRM1-202ENST00000337303 PANK2Q9BZ23 570 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 BOLA2Q9H3K6 86 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 SPG7Q9UQ90 795 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 BTBD11A6QL63 1104 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 GNAT3A8MTJ3 354 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 CCDC175P0C221 793 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 GNG11P61952 73 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 TMEM132AQ24JP5 1023 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 FAM200AQ8TCP9 573 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 SNX21Q969T3 373 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 ARFGAP3Q9NP61 516 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 SPECC1Q5M775 1068 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 CTR9Q6PD62 1173 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 CCDC91Q7Z6B0 441 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 NUP88Q99567 741 aaPredicted RBP7.88□□□□□ -1.15
PBRM1-202ENST00000337303 CCDC61Q9Y6R9 512 aa7.88□□□□□ -1.15
PBRM1-202ENST00000337303 PTPRCP08575 1304 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 LARP1Q6PKG0 1096 aaKnown RBP7.87□□□□□ -1.15
PBRM1-202ENST00000337303 DHX37Q8IY37 1157 aaKnown RBP7.87□□□□□ -1.15
PBRM1-202ENST00000337303 AKAP2Q9Y2D5 859 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 ATP2B2Q01814 1243 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 TTC22Q5TAA0 569 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 DDX54Q8TDD1 881 aaKnown RBP7.87□□□□□ -1.15
PBRM1-202ENST00000337303 TMX3Q96JJ7 454 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 CCDC113Q9H0I3 377 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 HMGXB3Q12766 1538 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 GOLGA6L10A0A0M3HER8 536 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 IVLP07476 585 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 ZSCAN22P10073 491 aaPredicted RBP7.87□□□□□ -1.15
PBRM1-202ENST00000337303 GUCY1B3Q02153 619 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 ESCO1Q5FWF5 840 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 CPLX3Q8WVH0 158 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 GTPBP4Q9BZE4 634 aaKnown RBP7.87□□□□□ -1.15
PBRM1-202ENST00000337303 ZSCAN16Q9H4T2 348 aaPredicted RBP7.87□□□□□ -1.15
PBRM1-202ENST00000337303 ECHDC1Q9NTX5 307 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 LRP2BPQ9P2M1 347 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 NCAPD3P42695 1498 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 GCOM1H8Y6P7 765 aaPredicted RBP7.87□□□□□ -1.15
PBRM1-202ENST00000337303 MYZAPP0CAP1 466 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 EVI5LQ96CN4 794 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 ALS2CR12Q96Q35 445 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 TSG101Q99816 390 aa7.87□□□□□ -1.15
PBRM1-202ENST00000337303 SRRTQ9BXP5 876 aaKnown RBP7.87□□□□□ -1.15
PBRM1-202ENST00000337303 SKILP12757 684 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 WWC2Q6AWC2 1192 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 GIMAP6Q6P9H5 292 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 EHBP1Q8NDI1 1231 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 CCDC12Q8WUD4 166 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-202ENST00000337303 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.86□□□□□ -1.15
PBRM1-202ENST00000337303 BIN1O00499 593 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 ANAPC15P60006 121 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 CCDC186Q7Z3E2 898 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 IL16Q14005 1332 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 KIF20AO95235 890 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 IFIT1P09914 478 aaKnown RBP7.86□□□□□ -1.15
PBRM1-202ENST00000337303 MNAT1P51948 309 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 NUCB1Q02818 461 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 HLTFQ14527 1009 aaKnown RBP eCLIP7.86□□□□□ -1.154e-6■■■■□ 22.5
PBRM1-202ENST00000337303 CCDC102BQ68D86 513 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 KANK3Q6NY19 840 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 MCM10Q7L590 875 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 IPO4Q8TEX9 1081 aaKnown RBP7.86□□□□□ -1.15
PBRM1-202ENST00000337303 HMG20BQ9P0W2 317 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 POTEJP0CG39 1038 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 TDRD12Q587J7 1177 aaKnown RBP7.86□□□□□ -1.15
PBRM1-202ENST00000337303 DNAAF4Q8WXU2 420 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 RAB34Q9BZG1 259 aa7.86□□□□□ -1.15
PBRM1-202ENST00000337303 PRG4Q92954 1404 aaPredicted RBP7.85□□□□□ -1.15
PBRM1-202ENST00000337303 GOLGA8BA8MQT2 603 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 DESP17661 470 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 TAF7Q15545 349 aaPredicted RBP7.85□□□□□ -1.15
PBRM1-202ENST00000337303 SPECC1LQ69YQ0 1117 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 CTCFLQ8NI51 663 aaPredicted RBP7.85□□□□□ -1.15
PBRM1-202ENST00000337303 NAPBQ9H115 298 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 GSTTP1A0A1W2PQM5 241 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 SLU7O95391 586 aaKnown RBP7.85□□□□□ -1.15
PBRM1-202ENST00000337303 PAF1Q8N7H5 531 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 ARHGAP45Q92619 1136 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 PYM1Q9BRP8 204 aaKnown RBP7.85□□□□□ -1.15
PBRM1-202ENST00000337303 TAOK3Q9H2K8 898 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 AQRO60306 1485 aaKnown RBP eCLIP7.85□□□□□ -1.151e-6■■■□□ 17.7
PBRM1-202ENST00000337303 GRIN2BQ13224 1484 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 F6X3S4 739 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 ZNF213O14771 459 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 IBSPP21815 317 aaPredicted RBP7.85□□□□□ -1.15
PBRM1-202ENST00000337303 CCDC178Q5BJE1 867 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 CYB5RLQ6IPT4 315 aa7.85□□□□□ -1.15
PBRM1-202ENST00000337303 CCDC94Q9BW85 323 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms