RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 KCNQ3O43525 872 aa15□□□□□ -0.01
MRPL55-203ENST00000336520 ZPR1O75312 459 aa15□□□□□ -0.01
MRPL55-203ENST00000336520 CANXP27824 592 aaKnown RBP15□□□□□ -0.01
MRPL55-203ENST00000336520 WDR43Q15061 677 aaKnown RBP eCLIP15□□□□□ -0.01
MRPL55-203ENST00000336520 COL15A1P39059 1388 aa14.99□□□□□ -0.01
MRPL55-203ENST00000336520 YY1P25490 414 aa14.99□□□□□ -0.01
MRPL55-203ENST00000336520 TAF7Q15545 349 aaPredicted RBP14.99□□□□□ -0.01
MRPL55-203ENST00000336520 PARP3Q9Y6F1 533 aa14.99□□□□□ -0.01
MRPL55-203ENST00000336520 DLG5Q8TDM6 1919 aa14.98□□□□□ -0.01
MRPL55-203ENST00000336520 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
MRPL55-203ENST00000336520 ZNF330Q9Y3S2 320 aaPredicted RBP14.98□□□□□ -0.01
MRPL55-203ENST00000336520 FKBP8Q14318 412 aa14.97□□□□□ -0.01
MRPL55-203ENST00000336520 NPM2Q86SE8 214 aaKnown RBP14.97□□□□□ -0.01
MRPL55-203ENST00000336520 THUMPD2Q9BTF0 503 aaKnown RBP14.97□□□□□ -0.01
MRPL55-203ENST00000336520 A0A087WZG4 1122 aa14.96□□□□□ -0.01
MRPL55-203ENST00000336520 SNRPA1P09661 255 aaKnown RBP14.96□□□□□ -0.01
MRPL55-203ENST00000336520 USPL1Q5W0Q7 1092 aa14.96□□□□□ -0.01
MRPL55-203ENST00000336520 CCDC146Q8IYE0 955 aa14.96□□□□□ -0.01
MRPL55-203ENST00000336520 PNISRQ8TF01 805 aaKnown RBP14.96□□□□□ -0.01
MRPL55-203ENST00000336520 MIS18AQ9NYP9 233 aa14.96□□□□□ -0.01
MRPL55-203ENST00000336520 NARFQ9UHQ1 456 aa14.96□□□□□ -0.01
MRPL55-203ENST00000336520 RIPK4P57078 832 aa14.95□□□□□ -0.02
MRPL55-203ENST00000336520 LMOD3Q0VAK6 560 aa14.95□□□□□ -0.02
MRPL55-203ENST00000336520 C10orf71Q711Q0 1435 aa14.94□□□□□ -0.02
MRPL55-203ENST00000336520 A1BGP04217 495 aa14.94□□□□□ -0.02
MRPL55-203ENST00000336520 TMPOP42166 694 aaKnown RBP14.94□□□□□ -0.02
MRPL55-203ENST00000336520 EIF5P55010 431 aaKnown RBP14.94□□□□□ -0.02
MRPL55-203ENST00000336520 PRAMEF22A3QJZ6 481 aa14.93□□□□□ -0.02
MRPL55-203ENST00000336520 GRIN3BO60391 1043 aa14.93□□□□□ -0.02
MRPL55-203ENST00000336520 YBX3P16989 372 aaKnown RBP eCLIP14.93□□□□□ -0.022e-6■□□□□ 10.7
MRPL55-203ENST00000336520 IL6STP40189 918 aaPredicted RBP14.93□□□□□ -0.02
MRPL55-203ENST00000336520 DDR1Q08345 913 aa14.93□□□□□ -0.02
MRPL55-203ENST00000336520 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
MRPL55-203ENST00000336520 RUNDC1Q96C34 613 aa14.93□□□□□ -0.02
MRPL55-203ENST00000336520 WWC3Q9ULE0 1092 aa14.93□□□□□ -0.02
MRPL55-203ENST00000336520 ADAMTS8Q9UP79 889 aa14.93□□□□□ -0.02
MRPL55-203ENST00000336520 RRP7AQ9Y3A4 280 aaKnown RBP14.93□□□□□ -0.02
MRPL55-203ENST00000336520 USP16Q9Y5T5 823 aa14.93□□□□□ -0.02
MRPL55-203ENST00000336520 POLRMTO00411 1230 aaKnown RBP14.91□□□□□ -0.02
MRPL55-203ENST00000336520 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-203ENST00000336520 TGFB2P61812 414 aa14.91□□□□□ -0.02
MRPL55-203ENST00000336520 NFIXQ14938 502 aa14.91□□□□□ -0.02
MRPL55-203ENST00000336520 TBC1D2BQ9UPU7 963 aa14.91□□□□□ -0.02
MRPL55-203ENST00000336520 KDM3BQ7LBC6 1761 aa14.9□□□□□ -0.02
MRPL55-203ENST00000336520 CHD4Q14839 1912 aa14.9□□□□□ -0.02
MRPL55-203ENST00000336520 PXDNLA1KZ92 1463 aa14.9□□□□□ -0.02
MRPL55-203ENST00000336520 KIF13BQ9NQT8 1826 aa14.9□□□□□ -0.02
MRPL55-203ENST00000336520 TM4SF1P30408 202 aa14.9□□□□□ -0.02
MRPL55-203ENST00000336520 BICDL1Q6ZP65 573 aa14.9□□□□□ -0.02
MRPL55-203ENST00000336520 BCL2L12Q9HB09 334 aa14.9□□□□□ -0.02
MRPL55-203ENST00000336520 TSPYL4Q9UJ04 414 aa14.9□□□□□ -0.02
MRPL55-203ENST00000336520 A0A0G2JLW4 131 aa14.89□□□□□ -0.03
MRPL55-203ENST00000336520 EIF4A1P60842 406 aaKnown RBP14.89□□□□□ -0.03
MRPL55-203ENST00000336520 DZIP3Q86Y13 1208 aaKnown RBP14.89□□□□□ -0.03
MRPL55-203ENST00000336520 SCN7AQ01118 1682 aa14.89□□□□□ -0.03
MRPL55-203ENST00000336520 LAMB4A4D0S4 1761 aa14.88□□□□□ -0.03
MRPL55-203ENST00000336520 ANP32CO43423 234 aa14.88□□□□□ -0.03
MRPL55-203ENST00000336520 GIGYF1O75420 1035 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-203ENST00000336520 DPEP1P16444 411 aa14.88□□□□□ -0.03
MRPL55-203ENST00000336520 N4BP2Q86UW6 1770 aaPredicted RBP14.88□□□□□ -0.03
MRPL55-203ENST00000336520 SERPINB2P05120 415 aa14.87□□□□□ -0.03
MRPL55-203ENST00000336520 KIAA1551Q9HCM1 1747 aa14.86□□□□□ -0.03
MRPL55-203ENST00000336520 NBPF26B4DH59 902 aa14.86□□□□□ -0.03
MRPL55-203ENST00000336520 CAMTA2O94983 1202 aa14.86□□□□□ -0.03
MRPL55-203ENST00000336520 TBC1D9BQ66K14 1250 aa14.86□□□□□ -0.03
MRPL55-203ENST00000336520 NBPF10Q6P3W6 841 aaKnown RBP14.86□□□□□ -0.03
MRPL55-203ENST00000336520 NBPF15Q8N660 670 aa14.86□□□□□ -0.03
MRPL55-203ENST00000336520 BABAM1Q9NWV8 329 aa14.86□□□□□ -0.03
MRPL55-203ENST00000336520 BCS1LQ9Y276 419 aa14.86□□□□□ -0.03
MRPL55-203ENST00000336520 LAS1LQ9Y4W2 734 aaKnown RBP14.86□□□□□ -0.03
MRPL55-203ENST00000336520 NPHP1O15259 732 aa14.85□□□□□ -0.03
MRPL55-203ENST00000336520 TRIM35Q9UPQ4 493 aa14.85□□□□□ -0.03
MRPL55-203ENST00000336520 ZNF652Q9Y2D9 606 aa14.85□□□□□ -0.03
MRPL55-203ENST00000336520 AFDNP55196 1824 aaKnown RBP14.85□□□□□ -0.03
MRPL55-203ENST00000336520 CARMIL3Q8ND23 1372 aa14.85□□□□□ -0.03
MRPL55-203ENST00000336520 GOLGB1Q14789 3259 aaKnown RBP14.84□□□□□ -0.03
MRPL55-203ENST00000336520 BCORQ6W2J9 1755 aa14.84□□□□□ -0.03
MRPL55-203ENST00000336520 APAF1O14727 1248 aa14.84□□□□□ -0.03
MRPL55-203ENST00000336520 CHRNA5P30532 468 aa14.84□□□□□ -0.03
MRPL55-203ENST00000336520 NGEFQ8N5V2 710 aa14.84□□□□□ -0.03
MRPL55-203ENST00000336520 SETDB2Q96T68 719 aa14.84□□□□□ -0.03
MRPL55-203ENST00000336520 PIM2Q9P1W9 311 aa14.84□□□□□ -0.03
MRPL55-203ENST00000336520 CCDC184Q52MB2 194 aa14.83□□□□□ -0.04
MRPL55-203ENST00000336520 ZNF784Q8NCA9 323 aaPredicted RBP14.83□□□□□ -0.04
MRPL55-203ENST00000336520 MRS2Q9HD23 443 aa14.83□□□□□ -0.04
MRPL55-203ENST00000336520 NRXN2Q9P2S2 1712 aa14.83□□□□□ -0.04
MRPL55-203ENST00000336520 MYL6BP14649 208 aa14.82□□□□□ -0.04
MRPL55-203ENST00000336520 EIF2S2P20042 333 aaKnown RBP14.82□□□□□ -0.04
MRPL55-203ENST00000336520 DALRD3Q5D0E6 543 aaKnown RBP14.82□□□□□ -0.04
MRPL55-203ENST00000336520 CLEC4GQ6UXB4 293 aa14.82□□□□□ -0.04
MRPL55-203ENST00000336520 CNBD1Q8NA66 436 aa14.82□□□□□ -0.04
MRPL55-203ENST00000336520 CHL1O00533 1208 aa14.81□□□□□ -0.04
MRPL55-203ENST00000336520 KCNA3P22001 575 aa14.81□□□□□ -0.04
MRPL55-203ENST00000336520 KIF6Q6ZMV9 814 aa14.81□□□□□ -0.04
MRPL55-203ENST00000336520 ERBB4Q15303 1308 aa14.81□□□□□ -0.04
MRPL55-203ENST00000336520 UTRNP46939 3433 aa14.8□□□□□ -0.04
MRPL55-203ENST00000336520 ST5P78524 1137 aa14.8□□□□□ -0.04
MRPL55-203ENST00000336520 CALD1Q05682 793 aaKnown RBP14.8□□□□□ -0.04
MRPL55-203ENST00000336520 PRR5LQ6MZQ0 368 aa14.8□□□□□ -0.04
MRPL55-203ENST00000336520 ARHGAP27Q6ZUM4 889 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms