RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 BBXQ8WY36 941 aaPredicted RBP13.65□□□□□ -0.22
SCN5A-202ENST00000333535 KDM4AO75164 1064 aa13.65□□□□□ -0.22
SCN5A-202ENST00000333535 STX1AQ16623 288 aa13.65□□□□□ -0.22
SCN5A-202ENST00000333535 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.22
SCN5A-202ENST00000333535 A0A087WZG4 1122 aa13.65□□□□□ -0.23
SCN5A-202ENST00000333535 HOOK3Q86VS8 718 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 ANKLE2Q86XL3 938 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 FAM114A1Q8IWE2 563 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 FAM177BA6PVY3 158 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 CLIP2Q9UDT6 1046 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 CFAP70Q5T0N1 1121 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 SPECC1LQ69YQ0 1117 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 PRIMPOLQ96LW4 560 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 CETN1Q12798 172 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 IFI16Q16666 785 aaKnown RBP13.64□□□□□ -0.23
SCN5A-202ENST00000333535 DDX19AQ9NUU7 478 aaKnown RBP13.64□□□□□ -0.23
SCN5A-202ENST00000333535 CCDC175P0C221 793 aa13.64□□□□□ -0.23
SCN5A-202ENST00000333535 NFE2L2Q16236 605 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 LARP1Q6PKG0 1096 aaKnown RBP13.63□□□□□ -0.23
SCN5A-202ENST00000333535 NSD3Q9BZ95 1437 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 IQCA1Q86XH1 822 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 YEATS4O95619 227 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 RNF41Q9H4P4 317 aaPredicted RBP13.63□□□□□ -0.23
SCN5A-202ENST00000333535 MAP3K1Q13233 1512 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 PTPRCP08575 1304 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 KIF4BQ2VIQ3 1234 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
SCN5A-202ENST00000333535 C8orf76Q96K31 380 aa13.63□□□□□ -0.23
SCN5A-202ENST00000333535 SSBP05455 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCN5A-202ENST00000333535 AMPD3Q01432 767 aa13.62□□□□□ -0.23
SCN5A-202ENST00000333535 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCN5A-202ENST00000333535 AK9Q5TCS8 1911 aa13.62□□□□□ -0.23
SCN5A-202ENST00000333535 NUP88Q99567 741 aaPredicted RBP13.62□□□□□ -0.23
SCN5A-202ENST00000333535 CEP63Q96MT8 703 aa13.62□□□□□ -0.23
SCN5A-202ENST00000333535 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
SCN5A-202ENST00000333535 UVSSAQ2YD98 709 aa13.62□□□□□ -0.23
SCN5A-202ENST00000333535 CCDC12Q8WUD4 166 aaPredicted RBP13.62□□□□□ -0.23
SCN5A-202ENST00000333535 CABP1Q9NZU7 370 aa13.62□□□□□ -0.23
SCN5A-202ENST00000333535 RAI14Q9P0K7 980 aa13.62□□□□□ -0.23
SCN5A-202ENST00000333535 FERMT1Q9BQL6 677 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 SSR1P43307 286 aaKnown RBP13.61□□□□□ -0.23
SCN5A-202ENST00000333535 CTR9Q6PD62 1173 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
SCN5A-202ENST00000333535 TTC21AQ8NDW8 1320 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 GSTTP1A0A1W2PQM5 241 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 CUL5Q93034 780 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 ZPR1O75312 459 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 NAPBQ9H115 298 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 MX1P20591 662 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 MKNK2Q9HBH9 465 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
SCN5A-202ENST00000333535 SLFN5Q08AF3 891 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 IVLP07476 585 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 UBE2HP62256 183 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 PLVAPQ9BX97 442 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 CCDC178Q5BJE1 867 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 STXBP4Q6ZWJ1 553 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 SREK1Q8WXA9 508 aaKnown RBP13.6□□□□□ -0.23
SCN5A-202ENST00000333535 HYPKQ9NX55 129 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 LIMCH1Q9UPQ0 1083 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 KIF1BO60333 1816 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 CAMSAP2Q08AD1 1489 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 MAP4K4O95819 1239 aaPredicted RBP13.6□□□□□ -0.23
SCN5A-202ENST00000333535 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
SCN5A-202ENST00000333535 CCDC172P0C7W6 258 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 USP5P45974 858 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 C6orf163Q5TEZ5 329 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 PRDM11Q9NQV5 511 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 TUBB4AP04350 444 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 TNNT1P13805 278 aa13.6□□□□□ -0.23
SCN5A-202ENST00000333535 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
SCN5A-202ENST00000333535 TMPOP42166 694 aaKnown RBP13.59□□□□□ -0.23
SCN5A-202ENST00000333535 SLC12A5Q9H2X9 1139 aa13.59□□□□□ -0.23
SCN5A-202ENST00000333535 GOPCQ9HD26 462 aa13.59□□□□□ -0.23
SCN5A-202ENST00000333535 GOLIM4O00461 696 aa13.59□□□□□ -0.23
SCN5A-202ENST00000333535 TTF1Q15361 905 aaPredicted RBP13.59□□□□□ -0.23
SCN5A-202ENST00000333535 CCDC113Q9H0I3 377 aa13.59□□□□□ -0.23
SCN5A-202ENST00000333535 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
SCN5A-202ENST00000333535 CKAP4Q07065 602 aaKnown RBP13.59□□□□□ -0.23
SCN5A-202ENST00000333535 ZSCAN16Q9H4T2 348 aaPredicted RBP13.59□□□□□ -0.23
SCN5A-202ENST00000333535 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
SCN5A-202ENST00000333535 NSD2O96028 1365 aa13.59□□□□□ -0.23
SCN5A-202ENST00000333535 LRPPRCP42704 1394 aaKnown RBP13.59□□□□□ -0.23
SCN5A-202ENST00000333535 URI1O94763 535 aaPredicted RBP13.59□□□□□ -0.23
SCN5A-202ENST00000333535 CATIPQ7Z7H3 387 aa13.59□□□□□ -0.23
SCN5A-202ENST00000333535 LRRC27Q9C0I9 530 aa13.59□□□□□ -0.23
SCN5A-202ENST00000333535 CAMK4Q16566 473 aa13.58□□□□□ -0.23
SCN5A-202ENST00000333535 CNNM3Q8NE01 707 aa13.58□□□□□ -0.23
SCN5A-202ENST00000333535 KIF5BP33176 963 aa13.58□□□□□ -0.24
SCN5A-202ENST00000333535 BMS1Q14692 1282 aaKnown RBP13.58□□□□□ -0.24
SCN5A-202ENST00000333535 SSRP1Q08945 709 aaKnown RBP13.58□□□□□ -0.24
SCN5A-202ENST00000333535 CCDC97Q96F63 343 aaPredicted RBP13.58□□□□□ -0.24
SCN5A-202ENST00000333535 TMEM57Q8N5G2 664 aa13.58□□□□□ -0.24
SCN5A-202ENST00000333535 HMG20BQ9P0W2 317 aa13.58□□□□□ -0.24
SCN5A-202ENST00000333535 MPHOSPH6Q99547 160 aaKnown RBP13.58□□□□□ -0.24
SCN5A-202ENST00000333535 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms