RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 MRVI1Q9Y6F6 885 aa21.56■■□□□ 1.04
CDHR1-201ENST00000332904 RPGRIP1LQ68CZ1 1315 aa21.56■■□□□ 1.04
CDHR1-201ENST00000332904 TPD52L1Q16890 204 aaPredicted RBP21.55■■□□□ 1.04
CDHR1-201ENST00000332904 ZSCAN25Q6NSZ9 544 aa21.55■■□□□ 1.04
CDHR1-201ENST00000332904 VPS37CA5D8V6 355 aaPredicted RBP21.55■■□□□ 1.04
CDHR1-201ENST00000332904 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
CDHR1-201ENST00000332904 CCDC83Q8IWF9 413 aa21.55■■□□□ 1.04
CDHR1-201ENST00000332904 IL1RAPL2Q9NP60 686 aa21.55■■□□□ 1.04
CDHR1-201ENST00000332904 LIG1P18858 919 aa21.54■■□□□ 1.04
CDHR1-201ENST00000332904 TYRO3Q06418 890 aa21.54■■□□□ 1.04
CDHR1-201ENST00000332904 TRIM5Q9C035 493 aa21.54■■□□□ 1.04
CDHR1-201ENST00000332904 SNX14Q9Y5W7 946 aa21.54■■□□□ 1.04
CDHR1-201ENST00000332904 AEBP1Q8IUX7 1158 aa21.54■■□□□ 1.04
CDHR1-201ENST00000332904 KIAA0232Q92628 1395 aa21.54■■□□□ 1.04
CDHR1-201ENST00000332904 YTHDC2Q9H6S0 1430 aaKnown RBP21.54■■□□□ 1.04
CDHR1-201ENST00000332904 GJB2P29033 226 aa21.53■■□□□ 1.04
CDHR1-201ENST00000332904 DDX54Q8TDD1 881 aaKnown RBP21.53■■□□□ 1.04
CDHR1-201ENST00000332904 CACTINQ8WUQ7 758 aaKnown RBP21.53■■□□□ 1.04
CDHR1-201ENST00000332904 TRERF1Q96PN7 1200 aa21.53■■□□□ 1.04
CDHR1-201ENST00000332904 MTMR6Q9Y217 621 aa21.53■■□□□ 1.04
CDHR1-201ENST00000332904 ANO6Q4KMQ2 910 aa21.53■■□□□ 1.04
CDHR1-201ENST00000332904 FERMT3Q86UX7 667 aa21.53■■□□□ 1.04
CDHR1-201ENST00000332904 TTC14Q96N46 770 aa21.53■■□□□ 1.04
CDHR1-201ENST00000332904 USP27XA6NNY8 438 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 NPHP1O15259 732 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 SYCP1Q15431 976 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 KRT222Q8N1A0 295 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 CBX8Q9HC52 389 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 ZNF215Q9UL58 517 aaPredicted RBP21.52■■□□□ 1.04
CDHR1-201ENST00000332904 ARID5BQ14865 1188 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 CCDC144BQ3MJ40 725 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 NUTM1Q86Y26 1132 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 CCDC144CPQ8IYA2 1237 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 RTF1Q92541 710 aaKnown RBP21.52■■□□□ 1.04
CDHR1-201ENST00000332904 LIMCH1Q9UPQ0 1083 aa21.52■■□□□ 1.04
CDHR1-201ENST00000332904 NME9Q86XW9 330 aa21.52■■□□□ 1.03
CDHR1-201ENST00000332904 ATP6V1DQ9Y5K8 247 aa21.52■■□□□ 1.03
CDHR1-201ENST00000332904 MAP3K11Q16584 847 aa21.51■■□□□ 1.03
CDHR1-201ENST00000332904 TTC6Q86TZ1 520 aa21.51■■□□□ 1.03
CDHR1-201ENST00000332904 PTPRCP08575 1304 aa21.51■■□□□ 1.03
CDHR1-201ENST00000332904 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.51■■□□□ 1.03
CDHR1-201ENST00000332904 GNAI2P04899 355 aa21.5■■□□□ 1.03
CDHR1-201ENST00000332904 CEP135Q66GS9 1140 aa21.5■■□□□ 1.03
CDHR1-201ENST00000332904 NUP62CLQ9H1M0 184 aa21.5■■□□□ 1.03
CDHR1-201ENST00000332904 ZNF75DP51815 510 aa21.5■■□□□ 1.03
CDHR1-201ENST00000332904 FBXO38Q6PIJ6 1188 aa21.5■■□□□ 1.03
CDHR1-201ENST00000332904 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
CDHR1-201ENST00000332904 IL17RAQ96F46 866 aa21.49■■□□□ 1.03
CDHR1-201ENST00000332904 PAXBP1Q9Y5B6 917 aa21.49■■□□□ 1.03
CDHR1-201ENST00000332904 SSH2Q76I76 1423 aa21.49■■□□□ 1.03
CDHR1-201ENST00000332904 KIF20BQ96Q89 1820 aa21.49■■□□□ 1.03
CDHR1-201ENST00000332904 TUBGCP6Q96RT7 1819 aa21.49■■□□□ 1.03
CDHR1-201ENST00000332904 CASTP20810 708 aaKnown RBP21.49■■□□□ 1.03
CDHR1-201ENST00000332904 RBM6P78332 1123 aaKnown RBP21.48■■□□□ 1.03
CDHR1-201ENST00000332904 ELF2Q15723 593 aa21.48■■□□□ 1.03
CDHR1-201ENST00000332904 NECAB1Q8N987 351 aa21.48■■□□□ 1.03
CDHR1-201ENST00000332904 CHL1O00533 1208 aa21.48■■□□□ 1.03
CDHR1-201ENST00000332904 TIGD1Q96MW7 591 aa21.48■■□□□ 1.03
CDHR1-201ENST00000332904 DACT1Q9NYF0 836 aa21.48■■□□□ 1.03
CDHR1-201ENST00000332904 CCDC66A2RUB6 948 aa21.47■■□□□ 1.03
CDHR1-201ENST00000332904 IPO4Q8TEX9 1081 aaKnown RBP21.47■■□□□ 1.03
CDHR1-201ENST00000332904 CLIP2Q9UDT6 1046 aa21.47■■□□□ 1.03
CDHR1-201ENST00000332904 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.47■■□□□ 1.03
CDHR1-201ENST00000332904 ZNF397Q8NF99 534 aaPredicted RBP21.47■■□□□ 1.03
CDHR1-201ENST00000332904 PTPRMP28827 1452 aa21.47■■□□□ 1.03
CDHR1-201ENST00000332904 RAD50Q92878 1312 aa21.46■■□□□ 1.03
CDHR1-201ENST00000332904 CPSF1Q10570 1443 aaKnown RBP21.46■■□□□ 1.03
CDHR1-201ENST00000332904 PLA2G4DQ86XP0 818 aa21.46■■□□□ 1.03
CDHR1-201ENST00000332904 TNMDQ9H2S6 317 aa21.46■■□□□ 1.03
CDHR1-201ENST00000332904 DNAJC25Q9H1X3 360 aa21.46■■□□□ 1.03
CDHR1-201ENST00000332904 TRMT1Q9NXH9 659 aaKnown RBP21.46■■□□□ 1.03
CDHR1-201ENST00000332904 CAPN2P17655 700 aa21.45■■□□□ 1.02
CDHR1-201ENST00000332904 NEXMIFQ5QGS0 1516 aa21.45■■□□□ 1.02
CDHR1-201ENST00000332904 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
CDHR1-201ENST00000332904 ST3GAL1Q11201 340 aa21.45■■□□□ 1.02
CDHR1-201ENST00000332904 SULT6B1Q6IMI4 303 aa21.45■■□□□ 1.02
CDHR1-201ENST00000332904 CWC27Q6UX04 472 aaKnown RBP21.45■■□□□ 1.02
CDHR1-201ENST00000332904 HYPKQ9NX55 129 aa21.45■■□□□ 1.02
CDHR1-201ENST00000332904 TFIP11Q9UBB9 837 aaKnown RBP21.45■■□□□ 1.02
CDHR1-201ENST00000332904 STAP2Q9UGK3 403 aa21.45■■□□□ 1.02
CDHR1-201ENST00000332904 IDI1Q13907 227 aa21.44■■□□□ 1.02
CDHR1-201ENST00000332904 ADCK5Q3MIX3 580 aa21.44■■□□□ 1.02
CDHR1-201ENST00000332904 NECTIN2Q92692 538 aa21.44■■□□□ 1.02
CDHR1-201ENST00000332904 LSG1Q9H089 658 aaKnown RBP21.44■■□□□ 1.02
CDHR1-201ENST00000332904 SGSM2O43147 1006 aa21.44■■□□□ 1.02
CDHR1-201ENST00000332904 CDC37L1Q7L3B6 337 aa21.44■■□□□ 1.02
CDHR1-201ENST00000332904 ZNF446Q9NWS9 450 aa21.44■■□□□ 1.02
CDHR1-201ENST00000332904 LRRFIP2Q9Y608 721 aaKnown RBP21.43■■□□□ 1.02
CDHR1-201ENST00000332904 CHD1O14646 1710 aa21.43■■□□□ 1.02
CDHR1-201ENST00000332904 CCT4P50991 539 aaKnown RBP21.42■■□□□ 1.02
CDHR1-201ENST00000332904 KIDINS220Q9ULH0 1771 aa21.42■■□□□ 1.02
CDHR1-201ENST00000332904 ZNF165P49910 485 aa21.42■■□□□ 1.02
CDHR1-201ENST00000332904 COL9A3Q14050 684 aaPredicted RBP21.42■■□□□ 1.02
CDHR1-201ENST00000332904 WAPLQ7Z5K2 1190 aa21.42■■□□□ 1.02
CDHR1-201ENST00000332904 ERBB3P21860 1342 aa21.41■■□□□ 1.02
CDHR1-201ENST00000332904 GTF3C6Q969F1 213 aa21.41■■□□□ 1.02
CDHR1-201ENST00000332904 SYTL4Q96C24 671 aaPredicted RBP21.41■■□□□ 1.02
CDHR1-201ENST00000332904 JAKMIP1Q96N16 626 aaKnown RBP21.41■■□□□ 1.02
CDHR1-201ENST00000332904 ATP8B2P98198 1209 aa21.41■■□□□ 1.02
CDHR1-201ENST00000332904 ME3Q16798 604 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms