RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 FOXD4L3Q6VB84 417 aaPredicted RBP22.3■■□□□ 1.16
LYSMD4-201ENST00000332728 AMOTQ4VCS5 1084 aa22.3■■□□□ 1.16
LYSMD4-201ENST00000332728 ERC2O15083 957 aa22.29■■□□□ 1.16
LYSMD4-201ENST00000332728 TRAK2O60296 914 aa22.29■■□□□ 1.16
LYSMD4-201ENST00000332728 SNX21Q969T3 373 aa22.29■■□□□ 1.16
LYSMD4-201ENST00000332728 UPF3BQ9BZI7 483 aaKnown RBP22.29■■□□□ 1.16
LYSMD4-201ENST00000332728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.29■■□□□ 1.16
LYSMD4-201ENST00000332728 DDX54Q8TDD1 881 aaKnown RBP22.28■■□□□ 1.16
LYSMD4-201ENST00000332728 DBF4Q9UBU7 674 aaPredicted RBP22.28■■□□□ 1.16
LYSMD4-201ENST00000332728 RHPN1Q8TCX5 695 aa22.28■■□□□ 1.16
LYSMD4-201ENST00000332728 IBTKQ9P2D0 1353 aaPredicted RBP22.28■■□□□ 1.16
LYSMD4-201ENST00000332728 RGPD5Q99666 1765 aa22.28■■□□□ 1.16
LYSMD4-201ENST00000332728 ADAMTSL3P82987 1691 aa22.27■■□□□ 1.16
LYSMD4-201ENST00000332728 NEK4P51957 841 aa22.27■■□□□ 1.16
LYSMD4-201ENST00000332728 USP16Q9Y5T5 823 aa22.27■■□□□ 1.16
LYSMD4-201ENST00000332728 FAM208AQ9UK61 1670 aaKnown RBP22.27■■□□□ 1.15
LYSMD4-201ENST00000332728 ZNF496Q96IT1 587 aaPredicted RBP22.26■■□□□ 1.15
LYSMD4-201ENST00000332728 RIC3Q7Z5B4 369 aa22.26■■□□□ 1.15
LYSMD4-201ENST00000332728 TATP17735 454 aaPredicted RBP22.26■■□□□ 1.15
LYSMD4-201ENST00000332728 STRN4Q9NRL3 753 aa22.26■■□□□ 1.15
LYSMD4-201ENST00000332728 ATP5J2-PTCD1G3V325 749 aa22.25■■□□□ 1.15
LYSMD4-201ENST00000332728 PTCD1O75127 700 aaKnown RBP22.25■■□□□ 1.15
LYSMD4-201ENST00000332728 SSH3Q8TE77 659 aa22.25■■□□□ 1.15
LYSMD4-201ENST00000332728 LRRC37A3O60309 1634 aa22.24■■□□□ 1.15
LYSMD4-201ENST00000332728 CHMLP26374 656 aa22.24■■□□□ 1.15
LYSMD4-201ENST00000332728 ZNF790Q6PG37 636 aa22.24■■□□□ 1.15
LYSMD4-201ENST00000332728 ESYT1Q9BSJ8 1104 aa22.24■■□□□ 1.15
LYSMD4-201ENST00000332728 ZNF330Q9Y3S2 320 aaPredicted RBP22.24■■□□□ 1.15
LYSMD4-201ENST00000332728 XAGE3Q8WTP9 111 aa22.24■■□□□ 1.15
LYSMD4-201ENST00000332728 REC8O95072 547 aa22.23■■□□□ 1.15
LYSMD4-201ENST00000332728 COPS6Q7L5N1 327 aa22.23■■□□□ 1.15
LYSMD4-201ENST00000332728 SPG7Q9UQ90 795 aa22.23■■□□□ 1.15
LYSMD4-201ENST00000332728 CYP27B1O15528 508 aa22.23■■□□□ 1.15
LYSMD4-201ENST00000332728 RABEP1Q15276 862 aa22.23■■□□□ 1.15
LYSMD4-201ENST00000332728 CWC27Q6UX04 472 aaKnown RBP22.23■■□□□ 1.15
LYSMD4-201ENST00000332728 SUCLG2Q96I99 432 aa22.23■■□□□ 1.15
LYSMD4-201ENST00000332728 MYD88Q99836 296 aa22.22■■□□□ 1.15
LYSMD4-201ENST00000332728 PANK2Q9BZ23 570 aa22.22■■□□□ 1.15
LYSMD4-201ENST00000332728 CCDC8Q9H0W5 538 aaPredicted RBP22.22■■□□□ 1.15
LYSMD4-201ENST00000332728 SALL3Q9BXA9 1300 aa22.22■■□□□ 1.15
LYSMD4-201ENST00000332728 PHKG2P15735 406 aa22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 DDIT3P35638 169 aa22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 BICC1Q9H694 974 aaKnown RBP22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 NPHP3Q7Z494 1330 aa22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 KSR2Q6VAB6 950 aa22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 NDUFB9Q9Y6M9 179 aa22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 CPA1P15085 419 aa22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 NCLP19338 710 aaKnown RBP22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
LYSMD4-201ENST00000332728 SLC52A2Q9HAB3 445 aa22.2■■□□□ 1.14
LYSMD4-201ENST00000332728 ZNF142P52746 1687 aaPredicted RBP22.19■■□□□ 1.14
LYSMD4-201ENST00000332728 PDIA6Q15084 440 aa22.19■■□□□ 1.14
LYSMD4-201ENST00000332728 OSBPL3Q9H4L5 887 aa22.19■■□□□ 1.14
LYSMD4-201ENST00000332728 PRDM11Q9NQV5 511 aa22.19■■□□□ 1.14
LYSMD4-201ENST00000332728 MEGF6O75095 1541 aa22.19■■□□□ 1.14
LYSMD4-201ENST00000332728 TOM1L2Q6ZVM7 507 aa22.19■■□□□ 1.14
LYSMD4-201ENST00000332728 TTC5Q8N0Z6 440 aa22.19■■□□□ 1.14
LYSMD4-201ENST00000332728 RAB3GAP1Q15042 981 aa22.18■■□□□ 1.14
LYSMD4-201ENST00000332728 TLR7Q9NYK1 1049 aaKnown RBP22.18■■□□□ 1.14
LYSMD4-201ENST00000332728 POLA2Q14181 598 aa22.18■■□□□ 1.14
LYSMD4-201ENST00000332728 EPHA10Q5JZY3 1008 aa22.18■■□□□ 1.14
LYSMD4-201ENST00000332728 MCTP1Q6DN14 999 aa22.18■■□□□ 1.14
LYSMD4-201ENST00000332728 IGKV5-2P06315 115 aa22.17■■□□□ 1.14
LYSMD4-201ENST00000332728 MST1RQ04912 1400 aa22.17■■□□□ 1.14
LYSMD4-201ENST00000332728 MED1Q15648 1581 aaPredicted RBP22.17■■□□□ 1.14
LYSMD4-201ENST00000332728 AACSQ86V21 672 aa22.17■■□□□ 1.14
LYSMD4-201ENST00000332728 ST18O60284 1047 aa22.17■■□□□ 1.14
LYSMD4-201ENST00000332728 KIF1BPQ96EK5 621 aa22.17■■□□□ 1.14
LYSMD4-201ENST00000332728 KAZALD1Q96I82 304 aa22.17■■□□□ 1.14
LYSMD4-201ENST00000332728 CABP4P57796 275 aa22.16■■□□□ 1.14
LYSMD4-201ENST00000332728 PI4K2BQ8TCG2 481 aa22.16■■□□□ 1.14
LYSMD4-201ENST00000332728 KAT6BQ8WYB5 2073 aa22.16■■□□□ 1.14
LYSMD4-201ENST00000332728 CHMP3Q9Y3E7 222 aa22.16■■□□□ 1.14
LYSMD4-201ENST00000332728 ZNF335Q9H4Z2 1342 aaPredicted RBP22.16■■□□□ 1.14
LYSMD4-201ENST00000332728 KDM6AO15550 1401 aaPredicted RBP22.16■■□□□ 1.14
LYSMD4-201ENST00000332728 NCOA3Q9Y6Q9 1424 aa22.15■■□□□ 1.14
LYSMD4-201ENST00000332728 CADPS2Q86UW7 1296 aa22.15■■□□□ 1.14
LYSMD4-201ENST00000332728 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
LYSMD4-201ENST00000332728 EDC3Q96F86 508 aaKnown RBP22.15■■□□□ 1.14
LYSMD4-201ENST00000332728 GRM8O00222 908 aa22.15■■□□□ 1.14
LYSMD4-201ENST00000332728 DDX21Q9NR30 783 aaKnown RBP eCLIP22.15■■□□□ 1.14
LYSMD4-201ENST00000332728 BRINP3Q76B58 766 aa22.14■■□□□ 1.14
LYSMD4-201ENST00000332728 A0A0G2JS52 829 aa22.14■■□□□ 1.13
LYSMD4-201ENST00000332728 HYPKQ9NX55 129 aa22.14■■□□□ 1.13
LYSMD4-201ENST00000332728 CHGBP05060 677 aa22.13■■□□□ 1.13
LYSMD4-201ENST00000332728 IFIT2P09913 472 aaKnown RBP22.13■■□□□ 1.13
LYSMD4-201ENST00000332728 HOXB7P09629 217 aa22.13■■□□□ 1.13
LYSMD4-201ENST00000332728 UBE3BQ7Z3V4 1068 aa22.13■■□□□ 1.13
LYSMD4-201ENST00000332728 BOLA2Q9H3K6 86 aa22.13■■□□□ 1.13
LYSMD4-201ENST00000332728 CLASRPQ8N2M8 674 aaKnown RBP22.12■■□□□ 1.13
LYSMD4-201ENST00000332728 GBP4Q96PP9 640 aa22.12■■□□□ 1.13
LYSMD4-201ENST00000332728 GOLGA6L3A6NEY3 463 aa22.12■■□□□ 1.13
LYSMD4-201ENST00000332728 TMX3Q96JJ7 454 aa22.12■■□□□ 1.13
LYSMD4-201ENST00000332728 STAP2Q9UGK3 403 aa22.12■■□□□ 1.13
LYSMD4-201ENST00000332728 SLIT3O75094 1523 aa22.11■■□□□ 1.13
LYSMD4-201ENST00000332728 CCDC85AQ96PX6 553 aaPredicted RBP22.11■■□□□ 1.13
LYSMD4-201ENST00000332728 BAG4O95429 457 aaKnown RBP22.11■■□□□ 1.13
LYSMD4-201ENST00000332728 DDX58O95786 925 aaKnown RBP22.11■■□□□ 1.13
LYSMD4-201ENST00000332728 XRCC6P12956 609 aaKnown RBP eCLIP22.11■■□□□ 1.13
LYSMD4-201ENST00000332728 DDX11L8A8MPP1 907 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms