RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TRERF1Q96PN7 1200 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 INCENPQ9NQS7 918 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 AQRO60306 1485 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLN8-201ENST00000331222 CTNNA3Q9UI47 895 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 GAPVD1Q14C86 1478 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 PRC1O43663 620 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 ZBTB3Q9H5J0 574 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 ATP5J2-PTCD1G3V325 749 aa12.28□□□□□ -0.44
CLN8-201ENST00000331222 EIF3JO75822 258 aaKnown RBP12.27□□□□□ -0.44
CLN8-201ENST00000331222 TMEM57Q8N5G2 664 aa12.27□□□□□ -0.44
CLN8-201ENST00000331222 SNRKQ9NRH2 765 aa12.27□□□□□ -0.44
CLN8-201ENST00000331222 SLC12A7Q9Y666 1083 aa12.27□□□□□ -0.44
CLN8-201ENST00000331222 FYCO1Q9BQS8 1478 aa12.27□□□□□ -0.44
CLN8-201ENST00000331222 CCDC66A2RUB6 948 aa12.27□□□□□ -0.45
CLN8-201ENST00000331222 NOP2P46087 812 aaKnown RBP12.27□□□□□ -0.45
CLN8-201ENST00000331222 IFIT5Q13325 482 aaKnown RBP12.27□□□□□ -0.45
CLN8-201ENST00000331222 POLR3GO15318 223 aaPredicted RBP12.27□□□□□ -0.45
CLN8-201ENST00000331222 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
CLN8-201ENST00000331222 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
CLN8-201ENST00000331222 LUZP1Q86V48 1076 aa12.27□□□□□ -0.45
CLN8-201ENST00000331222 TXLNBQ8N3L3 684 aa12.27□□□□□ -0.45
CLN8-201ENST00000331222 IQSEC3Q9UPP2 1182 aaPredicted RBP12.27□□□□□ -0.45
CLN8-201ENST00000331222 IFIT3O14879 490 aaKnown RBP12.26□□□□□ -0.45
CLN8-201ENST00000331222 SSRP1Q08945 709 aaKnown RBP12.26□□□□□ -0.45
CLN8-201ENST00000331222 DUSP27Q5VZP5 1158 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 APBB1IPQ7Z5R6 666 aaPredicted RBP12.26□□□□□ -0.45
CLN8-201ENST00000331222 CADPSQ9ULU8 1353 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 ZNF213O14771 459 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 FKBP15Q5T1M5 1219 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 TMCO3Q6UWJ1 677 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 IQCEQ6IPM2 695 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 HOOK3Q86VS8 718 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 C16orf71Q8IYS4 520 aaPredicted RBP12.26□□□□□ -0.45
CLN8-201ENST00000331222 CETN2P41208 172 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 RNF187Q5TA31 235 aaPredicted RBP12.26□□□□□ -0.45
CLN8-201ENST00000331222 OTUD6BQ8N6M0 293 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 ATF7IPQ6VMQ6 1270 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 DNAI2Q9GZS0 605 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 ATP2B3Q16720 1220 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 WASF1Q92558 559 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 ZNF287Q9HBT7 754 aa12.26□□□□□ -0.45
CLN8-201ENST00000331222 ERLIN1O75477 346 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 RFC4P35249 363 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 PICALMQ13492 652 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 STAMBPO95630 424 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 PNISRQ8TF01 805 aaKnown RBP12.25□□□□□ -0.45
CLN8-201ENST00000331222 PAIP2Q9BPZ3 127 aaKnown RBP12.25□□□□□ -0.45
CLN8-201ENST00000331222 SMTNL1A8MU46 457 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 FOXO3O43524 673 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 SLC5A1P13866 664 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 GRPEL1Q9HAV7 217 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 TMEM110-MUSTN1A8MSY1 372 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 GJC1P36383 396 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 HLTFQ14527 1009 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLN8-201ENST00000331222 C8orf76Q96K31 380 aa12.25□□□□□ -0.45
CLN8-201ENST00000331222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.24□□□□□ -0.45
CLN8-201ENST00000331222 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
CLN8-201ENST00000331222 CTCFLQ8NI51 663 aaPredicted RBP12.24□□□□□ -0.45
CLN8-201ENST00000331222 GDPD2Q9HCC8 539 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 ERBINQ96RT1 1412 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 GOLGA8BA8MQT2 603 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 URI1O94763 535 aaPredicted RBP12.24□□□□□ -0.45
CLN8-201ENST00000331222 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
CLN8-201ENST00000331222 CRACR2AQ9BSW2 395 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 SYNCQ9H7C4 482 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 JAG2Q9Y219 1238 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
CLN8-201ENST00000331222 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 IQCA1Q86XH1 822 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 ERICH3Q5RHP9 1530 aa12.24□□□□□ -0.45
CLN8-201ENST00000331222 MYO1BO43795 1136 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 TAF7Q15545 349 aaPredicted RBP12.23□□□□□ -0.45
CLN8-201ENST00000331222 AKAP2Q9Y2D5 859 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 SCAPERQ9BY12 1400 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 ANKRD50Q9ULJ7 1429 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 PABPN1LA6NDY0 278 aaKnown RBP12.23□□□□□ -0.45
CLN8-201ENST00000331222 IDEP14735 1019 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 MTIF2P46199 727 aaKnown RBP12.23□□□□□ -0.45
CLN8-201ENST00000331222 MAP3K12Q12852 859 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 TMEM266Q2M3C6 531 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 KIF4BQ2VIQ3 1234 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 GIMAP7Q8NHV1 300 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 ZBTB21Q9ULJ3 1066 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 CBX1P83916 185 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 CNNM3Q8NE01 707 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 ZMYND15Q9H091 742 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 GOLIM4O00461 696 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 DDX23Q9BUQ8 820 aaKnown RBP12.23□□□□□ -0.45
CLN8-201ENST00000331222 TFIP11Q9UBB9 837 aaKnown RBP12.23□□□□□ -0.45
CLN8-201ENST00000331222 TSPY2A6NKD2 308 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 CATIPQ7Z7H3 387 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 NUDT16Q96DE0 195 aaKnown RBP12.23□□□□□ -0.45
CLN8-201ENST00000331222 ZSWIM4Q9H7M6 989 aa12.23□□□□□ -0.45
CLN8-201ENST00000331222 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
CLN8-201ENST00000331222 SP4Q02446 784 aa12.22□□□□□ -0.45
CLN8-201ENST00000331222 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
CLN8-201ENST00000331222 SPECC1Q5M775 1068 aa12.22□□□□□ -0.45
CLN8-201ENST00000331222 GOLGA8AA7E2F4 631 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms