RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 GIMAP6Q6P9H5 292 aa17.36■□□□□ 0.37
SNX20-202ENST00000330943 STX6O43752 255 aa17.36■□□□□ 0.37
SNX20-202ENST00000330943 SYT1P21579 422 aa17.36■□□□□ 0.37
SNX20-202ENST00000330943 DMTNQ08495 405 aa17.36■□□□□ 0.37
SNX20-202ENST00000330943 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
SNX20-202ENST00000330943 LRRFIP2Q9Y608 721 aaKnown RBP17.36■□□□□ 0.37
SNX20-202ENST00000330943 PPP4R3BQ5MIZ7 849 aa17.35■□□□□ 0.37
SNX20-202ENST00000330943 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
SNX20-202ENST00000330943 RTF1Q92541 710 aaKnown RBP17.35■□□□□ 0.37
SNX20-202ENST00000330943 ZSCAN20P17040 1043 aaPredicted RBP17.35■□□□□ 0.37
SNX20-202ENST00000330943 BCL2L12Q9HB09 334 aa17.35■□□□□ 0.37
SNX20-202ENST00000330943 C3P01024 1663 aa17.35■□□□□ 0.37
SNX20-202ENST00000330943 AK2P54819 239 aa17.34■□□□□ 0.37
SNX20-202ENST00000330943 FLIIQ13045 1269 aa17.34■□□□□ 0.37
SNX20-202ENST00000330943 F13A1P00488 732 aa17.34■□□□□ 0.37
SNX20-202ENST00000330943 SMC3Q9UQE7 1217 aa17.34■□□□□ 0.37
SNX20-202ENST00000330943 SNX14Q9Y5W7 946 aa17.34■□□□□ 0.37
SNX20-202ENST00000330943 DTNBO60941 627 aa17.34■□□□□ 0.37
SNX20-202ENST00000330943 LTKP29376 864 aa17.34■□□□□ 0.37
SNX20-202ENST00000330943 RAD50Q92878 1312 aa17.33■□□□□ 0.37
SNX20-202ENST00000330943 SPC24Q8NBT2 197 aa17.33■□□□□ 0.37
SNX20-202ENST00000330943 PYCARDQ9ULZ3 195 aa17.33■□□□□ 0.37
SNX20-202ENST00000330943 AP5Z1O43299 807 aa17.33■□□□□ 0.36
SNX20-202ENST00000330943 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.33■□□□□ 0.36
SNX20-202ENST00000330943 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
SNX20-202ENST00000330943 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
SNX20-202ENST00000330943 UTP14CQ5TAP6 766 aaKnown RBP17.32■□□□□ 0.36
SNX20-202ENST00000330943 RUFY3Q7L099 469 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 TTC14Q96N46 770 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 FUCA2Q9BTY2 467 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 KCNF1Q9H3M0 494 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 NUTM2GQ5VZR2 741 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 KIAA1524Q8TCG1 905 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 LIMCH1Q9UPQ0 1083 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 ATP6V1DQ9Y5K8 247 aa17.32■□□□□ 0.36
SNX20-202ENST00000330943 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
SNX20-202ENST00000330943 RASEFQ8IZ41 740 aa17.31■□□□□ 0.36
SNX20-202ENST00000330943 AOX1Q06278 1338 aa17.31■□□□□ 0.36
SNX20-202ENST00000330943 CPA1P15085 419 aa17.31■□□□□ 0.36
SNX20-202ENST00000330943 AKAP12Q02952 1782 aa17.31■□□□□ 0.36
SNX20-202ENST00000330943 SGSM2O43147 1006 aa17.31■□□□□ 0.36
SNX20-202ENST00000330943 EPB41L2O43491 1005 aaKnown RBP17.31■□□□□ 0.36
SNX20-202ENST00000330943 DNM1Q05193 864 aaKnown RBP17.31■□□□□ 0.36
SNX20-202ENST00000330943 ARHGEF10O15013 1369 aa17.3■□□□□ 0.36
SNX20-202ENST00000330943 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
SNX20-202ENST00000330943 PRR36Q9H6K5 1346 aa17.3■□□□□ 0.36
SNX20-202ENST00000330943 RIOK3O14730 519 aaKnown RBP17.3■□□□□ 0.36
SNX20-202ENST00000330943 PDCL2Q8N4E4 241 aa17.3■□□□□ 0.36
SNX20-202ENST00000330943 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
SNX20-202ENST00000330943 SOS1Q07889 1333 aaPredicted RBP17.3■□□□□ 0.36
SNX20-202ENST00000330943 LARGE1O95461 756 aa17.3■□□□□ 0.36
SNX20-202ENST00000330943 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
SNX20-202ENST00000330943 RIMS1Q86UR5 1692 aaKnown RBP17.29■□□□□ 0.36
SNX20-202ENST00000330943 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
SNX20-202ENST00000330943 CCDC83Q8IWF9 413 aa17.29■□□□□ 0.36
SNX20-202ENST00000330943 SPDYE4A6NLX3 237 aa17.29■□□□□ 0.36
SNX20-202ENST00000330943 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
SNX20-202ENST00000330943 LSG1Q9H089 658 aaKnown RBP17.29■□□□□ 0.36
SNX20-202ENST00000330943 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
SNX20-202ENST00000330943 CASTP20810 708 aaKnown RBP17.28■□□□□ 0.36
SNX20-202ENST00000330943 GJB2P29033 226 aa17.28■□□□□ 0.36
SNX20-202ENST00000330943 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
SNX20-202ENST00000330943 PEAK1Q9H792 1746 aa17.28■□□□□ 0.36
SNX20-202ENST00000330943 CWC27Q6UX04 472 aaKnown RBP17.28■□□□□ 0.36
SNX20-202ENST00000330943 PI4K2BQ8TCG2 481 aa17.28■□□□□ 0.36
SNX20-202ENST00000330943 USP44Q9H0E7 712 aa17.27■□□□□ 0.36
SNX20-202ENST00000330943 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
SNX20-202ENST00000330943 GOLGA6L6A8MZA4 724 aa17.27■□□□□ 0.36
SNX20-202ENST00000330943 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.36
SNX20-202ENST00000330943 TPM3P06753 285 aa17.27■□□□□ 0.35
SNX20-202ENST00000330943 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
SNX20-202ENST00000330943 CCDC192P0DO97 292 aa17.27■□□□□ 0.35
SNX20-202ENST00000330943 MTMR6Q9Y217 621 aa17.27■□□□□ 0.35
SNX20-202ENST00000330943 CNTROBQ8N137 903 aa17.26■□□□□ 0.35
SNX20-202ENST00000330943 CHMP3Q9Y3E7 222 aa17.26■□□□□ 0.35
SNX20-202ENST00000330943 OVOS2A0A0J9YW53 1432 aa17.26■□□□□ 0.35
SNX20-202ENST00000330943 OVOS2Q6IE36 1432 aa17.26■□□□□ 0.35
SNX20-202ENST00000330943 RHPN1Q8TCX5 695 aa17.26■□□□□ 0.35
SNX20-202ENST00000330943 SSH3Q8TE77 659 aa17.26■□□□□ 0.35
SNX20-202ENST00000330943 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
SNX20-202ENST00000330943 U2AF2P26368 475 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNX20-202ENST00000330943 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
SNX20-202ENST00000330943 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
SNX20-202ENST00000330943 PTGS1P23219 599 aa17.24■□□□□ 0.35
SNX20-202ENST00000330943 GTPBP4Q9BZE4 634 aaKnown RBP17.24■□□□□ 0.35
SNX20-202ENST00000330943 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
SNX20-202ENST00000330943 ACEP12821 1306 aa17.24■□□□□ 0.35
SNX20-202ENST00000330943 RAB11FIP3O75154 756 aa17.24■□□□□ 0.35
SNX20-202ENST00000330943 JAKMIP1Q96N16 626 aaKnown RBP17.24■□□□□ 0.35
SNX20-202ENST00000330943 ROBO2Q9HCK4 1378 aa17.23■□□□□ 0.35
SNX20-202ENST00000330943 ANKRD7Q92527 254 aa17.23■□□□□ 0.35
SNX20-202ENST00000330943 PDRG1Q9NUG6 133 aa17.23■□□□□ 0.35
SNX20-202ENST00000330943 NRXN3Q9Y4C0 1643 aa17.23■□□□□ 0.35
SNX20-202ENST00000330943 CAMK4Q16566 473 aa17.23■□□□□ 0.35
SNX20-202ENST00000330943 TNRQ92752 1358 aa17.22■□□□□ 0.35
SNX20-202ENST00000330943 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
SNX20-202ENST00000330943 ADCK5Q3MIX3 580 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms