RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 USP42Q9H9J4 1324 aaKnown RBP27.67■■■□□ 2.02
TNFRSF18-201ENST00000328596 WDR43Q15061 677 aaKnown RBP eCLIP27.67■■■□□ 2.02
TNFRSF18-201ENST00000328596 SRP68Q9UHB9 627 aaKnown RBP27.67■■■□□ 2.02
TNFRSF18-201ENST00000328596 COL15A1P39059 1388 aa27.65■■■□□ 2.02
TNFRSF18-201ENST00000328596 CANXP27824 592 aaKnown RBP27.65■■■□□ 2.02
TNFRSF18-201ENST00000328596 ZPR1O75312 459 aa27.63■■■□□ 2.01
TNFRSF18-201ENST00000328596 RIPK4P57078 832 aa27.62■■■□□ 2.01
TNFRSF18-201ENST00000328596 FKBP8Q14318 412 aa27.62■■■□□ 2.01
TNFRSF18-201ENST00000328596 GPR162Q16538 588 aa27.62■■■□□ 2.01
TNFRSF18-201ENST00000328596 PNISRQ8TF01 805 aaKnown RBP27.62■■■□□ 2.01
TNFRSF18-201ENST00000328596 THUMPD2Q9BTF0 503 aaKnown RBP27.62■■■□□ 2.01
TNFRSF18-201ENST00000328596 SNRPA1P09661 255 aaKnown RBP27.61■■■□□ 2.01
TNFRSF18-201ENST00000328596 TMPOP42166 694 aaKnown RBP27.61■■■□□ 2.01
TNFRSF18-201ENST00000328596 EIF5P55010 431 aaKnown RBP27.61■■■□□ 2.01
TNFRSF18-201ENST00000328596 CCDC146Q8IYE0 955 aa27.61■■■□□ 2.01
TNFRSF18-201ENST00000328596 MIS18AQ9NYP9 233 aa27.61■■■□□ 2.01
TNFRSF18-201ENST00000328596 NARFQ9UHQ1 456 aa27.61■■■□□ 2.01
TNFRSF18-201ENST00000328596 ADAMTS8Q9UP79 889 aa27.61■■■□□ 2.01
TNFRSF18-201ENST00000328596 PARP3Q9Y6F1 533 aa27.61■■■□□ 2.01
TNFRSF18-201ENST00000328596 USPL1Q5W0Q7 1092 aa27.6■■■□□ 2.01
TNFRSF18-201ENST00000328596 RUNDC1Q96C34 613 aa27.6■■■□□ 2.01
TNFRSF18-201ENST00000328596 PELP1Q8IZL8 1130 aaKnown RBP27.59■■■□□ 2.01
TNFRSF18-201ENST00000328596 USP16Q9Y5T5 823 aa27.59■■■□□ 2.01
TNFRSF18-201ENST00000328596 UTRNP46939 3433 aa27.59■■■□□ 2.01
TNFRSF18-201ENST00000328596 A0A087WZG4 1122 aa27.58■■■□□ 2.01
TNFRSF18-201ENST00000328596 A1BGP04217 495 aa27.58■■■□□ 2.01
TNFRSF18-201ENST00000328596 LMOD3Q0VAK6 560 aa27.58■■■□□ 2.01
TNFRSF18-201ENST00000328596 PRAMEF22A3QJZ6 481 aa27.57■■■□□ 2
TNFRSF18-201ENST00000328596 IL6STP40189 918 aaPredicted RBP27.57■■■□□ 2
TNFRSF18-201ENST00000328596 YY1P25490 414 aa27.55■■■□□ 2
TNFRSF18-201ENST00000328596 TM4SF1P30408 202 aa27.55■■■□□ 2
TNFRSF18-201ENST00000328596 RRP7AQ9Y3A4 280 aaKnown RBP27.55■■■□□ 2
TNFRSF18-201ENST00000328596 GOLGB1Q14789 3259 aaKnown RBP27.55■■■□□ 2
TNFRSF18-201ENST00000328596 KDM3BQ7LBC6 1761 aa27.55■■■□□ 2
TNFRSF18-201ENST00000328596 DDR1Q08345 913 aa27.54■■■□□ 2
TNFRSF18-201ENST00000328596 C10orf71Q711Q0 1435 aa27.54■■■□□ 2
TNFRSF18-201ENST00000328596 BCL2L12Q9HB09 334 aa27.54■■■□□ 2
TNFRSF18-201ENST00000328596 ZNF330Q9Y3S2 320 aaPredicted RBP27.54■■■□□ 2
TNFRSF18-201ENST00000328596 KIF13BQ9NQT8 1826 aa27.53■■■□□ 2
TNFRSF18-201ENST00000328596 NEUROD2Q15784 382 aa27.53■■■□□ 2
TNFRSF18-201ENST00000328596 NPM2Q86SE8 214 aaKnown RBP27.53■■■□□ 2
TNFRSF18-201ENST00000328596 YBX3P16989 372 aaKnown RBP eCLIP27.52■■■□□ 2
TNFRSF18-201ENST00000328596 EIF4A1P60842 406 aaKnown RBP27.52■■■□□ 2
TNFRSF18-201ENST00000328596 POLRMTO00411 1230 aaKnown RBP27.51■■□□□ 1.99
TNFRSF18-201ENST00000328596 TGFB2P61812 414 aa27.5■■□□□ 1.99
TNFRSF18-201ENST00000328596 NFIXQ14938 502 aa27.5■■□□□ 1.99
TNFRSF18-201ENST00000328596 TSPYL4Q9UJ04 414 aa27.5■■□□□ 1.99
TNFRSF18-201ENST00000328596 TBC1D2BQ9UPU7 963 aa27.5■■□□□ 1.99
TNFRSF18-201ENST00000328596 ANP32CO43423 234 aa27.49■■□□□ 1.99
TNFRSF18-201ENST00000328596 GRIN3BO60391 1043 aa27.49■■□□□ 1.99
TNFRSF18-201ENST00000328596 GIGYF1O75420 1035 aaPredicted RBP27.49■■□□□ 1.99
TNFRSF18-201ENST00000328596 PIP4K2AP48426 406 aaPredicted RBP27.49■■□□□ 1.99
TNFRSF18-201ENST00000328596 BABAM1Q9NWV8 329 aa27.49■■□□□ 1.99
TNFRSF18-201ENST00000328596 TRIM35Q9UPQ4 493 aa27.48■■□□□ 1.99
TNFRSF18-201ENST00000328596 PXDNLA1KZ92 1463 aa27.48■■□□□ 1.99
TNFRSF18-201ENST00000328596 CCDC184Q52MB2 194 aa27.47■■□□□ 1.99
TNFRSF18-201ENST00000328596 CHD4Q14839 1912 aa27.46■■□□□ 1.99
TNFRSF18-201ENST00000328596 SCN7AQ01118 1682 aa27.46■■□□□ 1.99
TNFRSF18-201ENST00000328596 LAMB4A4D0S4 1761 aa27.45■■□□□ 1.99
TNFRSF18-201ENST00000328596 NBPF26B4DH59 902 aa27.45■■□□□ 1.98
TNFRSF18-201ENST00000328596 NBPF10Q6P3W6 841 aaKnown RBP27.45■■□□□ 1.98
TNFRSF18-201ENST00000328596 DZIP3Q86Y13 1208 aaKnown RBP27.45■■□□□ 1.98
TNFRSF18-201ENST00000328596 NBPF15Q8N660 670 aa27.45■■□□□ 1.98
TNFRSF18-201ENST00000328596 KIAA1551Q9HCM1 1747 aa27.44■■□□□ 1.98
TNFRSF18-201ENST00000328596 A0A0G2JLW4 131 aa27.44■■□□□ 1.98
TNFRSF18-201ENST00000328596 CAMTA2O94983 1202 aa27.44■■□□□ 1.98
TNFRSF18-201ENST00000328596 WWC3Q9ULE0 1092 aa27.44■■□□□ 1.98
TNFRSF18-201ENST00000328596 DPEP1P16444 411 aa27.43■■□□□ 1.98
TNFRSF18-201ENST00000328596 TBC1D9BQ66K14 1250 aa27.43■■□□□ 1.98
TNFRSF18-201ENST00000328596 BICDL1Q6ZP65 573 aa27.43■■□□□ 1.98
TNFRSF18-201ENST00000328596 N4BP2Q86UW6 1770 aaPredicted RBP27.43■■□□□ 1.98
TNFRSF18-201ENST00000328596 APAF1O14727 1248 aa27.42■■□□□ 1.98
TNFRSF18-201ENST00000328596 SERPINB2P05120 415 aa27.42■■□□□ 1.98
TNFRSF18-201ENST00000328596 AFDNP55196 1824 aaKnown RBP27.41■■□□□ 1.98
TNFRSF18-201ENST00000328596 NRXN2Q9P2S2 1712 aa27.41■■□□□ 1.98
TNFRSF18-201ENST00000328596 CHL1O00533 1208 aa27.4■■□□□ 1.98
TNFRSF18-201ENST00000328596 BCORQ6W2J9 1755 aa27.39■■□□□ 1.98
TNFRSF18-201ENST00000328596 CLEC4GQ6UXB4 293 aa27.38■■□□□ 1.97
TNFRSF18-201ENST00000328596 MRS2Q9HD23 443 aa27.38■■□□□ 1.97
TNFRSF18-201ENST00000328596 LAS1LQ9Y4W2 734 aaKnown RBP27.38■■□□□ 1.97
TNFRSF18-201ENST00000328596 CARMIL3Q8ND23 1372 aa27.37■■□□□ 1.97
TNFRSF18-201ENST00000328596 KCNA3P22001 575 aa27.37■■□□□ 1.97
TNFRSF18-201ENST00000328596 SETDB2Q96T68 719 aa27.37■■□□□ 1.97
TNFRSF18-201ENST00000328596 ZNF652Q9Y2D9 606 aa27.37■■□□□ 1.97
TNFRSF18-201ENST00000328596 RGL2O15211 777 aa27.36■■□□□ 1.97
TNFRSF18-201ENST00000328596 BCS1LQ9Y276 419 aa27.36■■□□□ 1.97
TNFRSF18-201ENST00000328596 ERBB4Q15303 1308 aa27.36■■□□□ 1.97
TNFRSF18-201ENST00000328596 PIM2Q9P1W9 311 aa27.35■■□□□ 1.97
TNFRSF18-201ENST00000328596 CHRNA5P30532 468 aa27.34■■□□□ 1.97
TNFRSF18-201ENST00000328596 CFAP44Q96MT7 982 aa27.34■■□□□ 1.97
TNFRSF18-201ENST00000328596 BRCA1P38398 1863 aaKnown RBP27.34■■□□□ 1.97
TNFRSF18-201ENST00000328596 MYL6BP14649 208 aa27.33■■□□□ 1.97
TNFRSF18-201ENST00000328596 NGEFQ8N5V2 710 aa27.33■■□□□ 1.97
TNFRSF18-201ENST00000328596 EIF2S2P20042 333 aaKnown RBP27.32■■□□□ 1.96
TNFRSF18-201ENST00000328596 CALD1Q05682 793 aaKnown RBP27.31■■□□□ 1.96
TNFRSF18-201ENST00000328596 PRR5LQ6MZQ0 368 aa27.31■■□□□ 1.96
TNFRSF18-201ENST00000328596 ZNF784Q8NCA9 323 aaPredicted RBP27.3■■□□□ 1.96
TNFRSF18-201ENST00000328596 ERVV-1B6SEH8 477 aa27.29■■□□□ 1.96
TNFRSF18-201ENST00000328596 HLFQ16534 295 aa27.29■■□□□ 1.96
TNFRSF18-201ENST00000328596 KRT24Q2M2I5 525 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms