RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 LARP1Q6PKG0 1096 aaKnown RBP3.34□□□□□ -1.88
CCDC144A-201ENST00000328495 SIX5Q8N196 739 aa3.34□□□□□ -1.88
CCDC144A-201ENST00000328495 GTPBP3Q969Y2 492 aaKnown RBP3.34□□□□□ -1.88
CCDC144A-201ENST00000328495 ZMYND15Q9H091 742 aa3.34□□□□□ -1.88
CCDC144A-201ENST00000328495 CABP1Q9NZU7 370 aa3.34□□□□□ -1.88
CCDC144A-201ENST00000328495 SCHIP1Q9P0W5 487 aaPredicted RBP3.34□□□□□ -1.88
CCDC144A-201ENST00000328495 IQSEC3Q9UPP2 1182 aaPredicted RBP3.34□□□□□ -1.88
CCDC144A-201ENST00000328495 KIAA1024Q9UPX6 916 aa3.34□□□□□ -1.88
CCDC144A-201ENST00000328495 UNC13AQ9UPW8 1703 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 TATP17735 454 aaPredicted RBP3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 RASA1P20936 1047 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 KRT76Q01546 638 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 AIDAQ96BJ3 306 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 PHF24Q9UPV7 400 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 M0R2N6 131 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 ZBTB7BO15156 539 aaPredicted RBP3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 LMOD1P29536 600 aaPredicted RBP3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 RNFT1Q5M7Z0 435 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 CRISPLD1Q9H336 500 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 RUBCNLQ9H714 662 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 ZDHHC3Q9NYG2 299 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 CHMP3Q9Y3E7 222 aa3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 RSF1Q96T23 1441 aaPredicted RBP3.33□□□□□ -1.88
CCDC144A-201ENST00000328495 GPR25O00155 361 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 SLC9A9Q8IVB4 645 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 MBIPQ9NS73 344 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 NSFL1CQ9UNZ2 370 aaKnown RBP3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 EPHA4P54764 986 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 SRSF11Q05519 484 aaKnown RBP3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 GAS6Q14393 721 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 TNS4Q8IZW8 715 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 VRTNQ9H8Y1 702 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 USP3Q9Y6I4 520 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 FAM196BA6NMK8 535 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 ATP4AP20648 1035 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 LORP23490 312 aaPredicted RBP3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 SEC13P55735 322 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 FOXK2Q01167 660 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 FIGNL1Q6PIW4 674 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 ZNF295-AS1Q8N0V1 137 aa3.32□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L15C9J2P7 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L10C9JJH3 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L13C9JLJ4 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L12C9JPN9 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L11C9JVI0 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L21D6R901 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L18D6R9N7 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L22D6RA61 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L17D6RBQ6 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L19D6RCP7 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L20D6RJB6 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 ADAMTS2O95450 1211 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 MX2P20592 715 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 PSMA6P60900 246 aaKnown RBP3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 USP17L24Q0WX57 530 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 TEAD4Q15561 434 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 ARSJQ5FYB0 599 aaPredicted RBP3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 CFHR5Q9BXR6 569 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 ZNF232Q9UNY5 417 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 ARAP1Q96P48 1450 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 SFI1A8K8P3 1242 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 SLURP2P0DP57 97 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 CFAP70Q5T0N1 1121 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 KANK4Q5T7N3 995 aaPredicted RBP3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 NLRP8Q86W28 1048 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 GJA3Q9Y6H8 435 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 SERTM1A2A2V5 107 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 PTK7Q13308 1070 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 CRTC2Q53ET0 693 aaPredicted RBP3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 BICDL1Q6ZP65 573 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 SVOPQ8N4V2 548 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 TSEN2Q8NCE0 465 aaKnown RBP3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 L3MBTL2Q969R5 705 aa3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 TSPAN10Q9H1Z9 355 aaPredicted RBP3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 ATXN7L1Q9ULK2 861 aaPredicted RBP3.31□□□□□ -1.88
CCDC144A-201ENST00000328495 IGF1RP08069 1367 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 THBS1P07996 1170 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 NOS2P35228 1153 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 MAP2K3P46734 347 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 MAP3K10Q02779 954 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 DPYDQ12882 1025 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 ANKMY2Q8IV38 441 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 CCDC97Q96F63 343 aaPredicted RBP3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 GPC6Q9Y625 555 aaPredicted RBP3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 PARP3Q9Y6F1 533 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 KIF13AQ9H1H9 1805 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 A0A1W2PNR3 127 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 PPP1R12BO60237 982 aaPredicted RBP3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 DKK1O94907 266 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 TBCELQ5QJ74 424 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 GAS2L2Q8NHY3 880 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 ZDHHC1Q8WTX9 485 aa3.3□□□□□ -1.88
CCDC144A-201ENST00000328495 UBAP2LQ14157 1087 aaKnown RBP3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 ABHD17AQ96GS6 310 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 PCDHGC4Q9Y5F7 938 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 EML1O00423 815 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 ATXN7O15265 892 aaPredicted RBP3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 RFX1P22670 979 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 TXLNAP40222 546 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 HIRAP54198 1017 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms