RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 IL17REQ8NFR9 667 aa24.23■■□□□ 1.47
SOX2-201ENST00000325404 ANP32BQ92688 251 aaKnown RBP24.23■■□□□ 1.47
SOX2-201ENST00000325404 PNMA6EA0A0J9YXQ4 647 aa24.23■■□□□ 1.47
SOX2-201ENST00000325404 RAB11FIP3O75154 756 aa24.22■■□□□ 1.47
SOX2-201ENST00000325404 USHBP1Q8N6Y0 703 aa24.22■■□□□ 1.47
SOX2-201ENST00000325404 ALS2Q96Q42 1657 aa24.22■■□□□ 1.47
SOX2-201ENST00000325404 SSH3Q8TE77 659 aa24.22■■□□□ 1.47
SOX2-201ENST00000325404 NEK4P51957 841 aa24.21■■□□□ 1.47
SOX2-201ENST00000325404 PKP1Q13835 747 aa24.21■■□□□ 1.47
SOX2-201ENST00000325404 TMX3Q96JJ7 454 aa24.21■■□□□ 1.47
SOX2-201ENST00000325404 NBPF6Q5VWK0 638 aa24.21■■□□□ 1.47
SOX2-201ENST00000325404 NBPF4Q96M43 638 aa24.21■■□□□ 1.47
SOX2-201ENST00000325404 USP44Q9H0E7 712 aa24.21■■□□□ 1.47
SOX2-201ENST00000325404 AK9Q5TCS8 1911 aa24.2■■□□□ 1.47
SOX2-201ENST00000325404 ZSCAN23Q3MJ62 389 aa24.2■■□□□ 1.46
SOX2-201ENST00000325404 DDX17Q92841 729 aaKnown RBP24.2■■□□□ 1.46
SOX2-201ENST00000325404 HOXB7P09629 217 aa24.2■■□□□ 1.46
SOX2-201ENST00000325404 LRRFIP2Q9Y608 721 aaKnown RBP24.19■■□□□ 1.46
SOX2-201ENST00000325404 ZNF335Q9H4Z2 1342 aaPredicted RBP24.19■■□□□ 1.46
SOX2-201ENST00000325404 XIRP1Q702N8 1843 aaKnown RBP24.19■■□□□ 1.46
SOX2-201ENST00000325404 CEMIPQ8WUJ3 1361 aa24.18■■□□□ 1.46
SOX2-201ENST00000325404 UBTFL1P0CB47 393 aaPredicted RBP24.18■■□□□ 1.46
SOX2-201ENST00000325404 POLA2Q14181 598 aa24.18■■□□□ 1.46
SOX2-201ENST00000325404 HS1BP3Q53T59 392 aa24.18■■□□□ 1.46
SOX2-201ENST00000325404 ERBB4Q15303 1308 aa24.17■■□□□ 1.46
SOX2-201ENST00000325404 CAVIN1Q6NZI2 390 aaKnown RBP24.17■■□□□ 1.46
SOX2-201ENST00000325404 BRD1O95696 1058 aa24.17■■□□□ 1.46
SOX2-201ENST00000325404 MED1Q15648 1581 aaPredicted RBP24.17■■□□□ 1.46
SOX2-201ENST00000325404 TNS3Q68CZ2 1445 aa24.16■■□□□ 1.46
SOX2-201ENST00000325404 MBD3O95983 291 aa24.16■■□□□ 1.46
SOX2-201ENST00000325404 PRPF40AO75400 957 aaKnown RBP24.15■■□□□ 1.46
SOX2-201ENST00000325404 ANKRD24Q8TF21 1146 aa24.15■■□□□ 1.46
SOX2-201ENST00000325404 LRRC59Q96AG4 307 aaKnown RBP24.15■■□□□ 1.46
SOX2-201ENST00000325404 HDGFL1Q5TGJ6 251 aa24.15■■□□□ 1.46
SOX2-201ENST00000325404 TRIM6-TRIM34B2RNG4 842 aa24.14■■□□□ 1.46
SOX2-201ENST00000325404 GPT2Q8TD30 523 aa24.14■■□□□ 1.46
SOX2-201ENST00000325404 PXDNQ92626 1479 aa24.14■■□□□ 1.45
SOX2-201ENST00000325404 ANO2Q9NQ90 1003 aa24.14■■□□□ 1.45
SOX2-201ENST00000325404 ZC3H6P61129 1189 aaKnown RBP24.13■■□□□ 1.45
SOX2-201ENST00000325404 RILPL2Q969X0 211 aa24.13■■□□□ 1.45
SOX2-201ENST00000325404 TSHZ3Q63HK5 1081 aa24.13■■□□□ 1.45
SOX2-201ENST00000325404 BRINP3Q76B58 766 aa24.13■■□□□ 1.45
SOX2-201ENST00000325404 NCLP19338 710 aaKnown RBP24.12■■□□□ 1.45
SOX2-201ENST00000325404 PALD1Q9ULE6 856 aa24.12■■□□□ 1.45
SOX2-201ENST00000325404 ZSCAN30Q86W11 494 aa24.12■■□□□ 1.45
SOX2-201ENST00000325404 AXIN2Q9Y2T1 843 aa24.12■■□□□ 1.45
SOX2-201ENST00000325404 NCAPD2Q15021 1401 aa24.11■■□□□ 1.45
SOX2-201ENST00000325404 HSPA4P34932 840 aa24.11■■□□□ 1.45
SOX2-201ENST00000325404 SPATA31A3Q5VYP0 1347 aa24.11■■□□□ 1.45
SOX2-201ENST00000325404 PDLIM2Q96JY6 352 aa24.11■■□□□ 1.45
SOX2-201ENST00000325404 HSP90AB4PQ58FF6 505 aa24.1■■□□□ 1.45
SOX2-201ENST00000325404 KIF1BPQ96EK5 621 aa24.1■■□□□ 1.45
SOX2-201ENST00000325404 NAP1L5Q96NT1 182 aaPredicted RBP24.1■■□□□ 1.45
SOX2-201ENST00000325404 LRSAM1Q6UWE0 723 aa24.1■■□□□ 1.45
SOX2-201ENST00000325404 NECTIN2Q92692 538 aa24.1■■□□□ 1.45
SOX2-201ENST00000325404 RGPD2P0DJD1 1756 aa24.09■■□□□ 1.45
SOX2-201ENST00000325404 EIF4A1P60842 406 aaKnown RBP24.09■■□□□ 1.45
SOX2-201ENST00000325404 PPP1R42Q7Z4L9 355 aa24.09■■□□□ 1.45
SOX2-201ENST00000325404 USP42Q9H9J4 1324 aaKnown RBP24.09■■□□□ 1.45
SOX2-201ENST00000325404 SLAIN2Q9P270 581 aa24.09■■□□□ 1.45
SOX2-201ENST00000325404 KDM3BQ7LBC6 1761 aa24.08■■□□□ 1.45
SOX2-201ENST00000325404 PLEKHO1Q53GL0 409 aaPredicted RBP24.08■■□□□ 1.45
SOX2-201ENST00000325404 UNC5CLQ8IV45 518 aa24.08■■□□□ 1.45
SOX2-201ENST00000325404 RHPN1Q8TCX5 695 aa24.08■■□□□ 1.45
SOX2-201ENST00000325404 ERBB3P21860 1342 aa24.08■■□□□ 1.44
SOX2-201ENST00000325404 PI4K2BQ8TCG2 481 aa24.08■■□□□ 1.44
SOX2-201ENST00000325404 RBSNQ9H1K0 784 aa24.08■■□□□ 1.44
SOX2-201ENST00000325404 PHAXQ9H814 394 aaKnown RBP24.07■■□□□ 1.44
SOX2-201ENST00000325404 SURF6O75683 361 aaKnown RBP24.07■■□□□ 1.44
SOX2-201ENST00000325404 PRIM1P49642 420 aaKnown RBP24.07■■□□□ 1.44
SOX2-201ENST00000325404 AMOTQ4VCS5 1084 aa24.07■■□□□ 1.44
SOX2-201ENST00000325404 BEND3Q5T5X7 828 aa24.06■■□□□ 1.44
SOX2-201ENST00000325404 RAD50Q92878 1312 aa24.06■■□□□ 1.44
SOX2-201ENST00000325404 CABLES1Q8TDN4 633 aa24.06■■□□□ 1.44
SOX2-201ENST00000325404 TMEM63CQ9P1W3 806 aa24.06■■□□□ 1.44
SOX2-201ENST00000325404 CAMTA1Q9Y6Y1 1673 aa24.05■■□□□ 1.44
SOX2-201ENST00000325404 SGSM2O43147 1006 aa24.05■■□□□ 1.44
SOX2-201ENST00000325404 DNAAF4Q8WXU2 420 aa24.05■■□□□ 1.44
SOX2-201ENST00000325404 CRYBG1Q9Y4K1 1723 aa24.05■■□□□ 1.44
SOX2-201ENST00000325404 MTX1Q13505 466 aa24.05■■□□□ 1.44
SOX2-201ENST00000325404 ZNF530Q6P9A1 599 aaPredicted RBP24.05■■□□□ 1.44
SOX2-201ENST00000325404 IL1RAPL2Q9NP60 686 aa24.04■■□□□ 1.44
SOX2-201ENST00000325404 LMO7Q8WWI1 1683 aa24.04■■□□□ 1.44
SOX2-201ENST00000325404 TTC41PQ6P2S7 1318 aa24.04■■□□□ 1.44
SOX2-201ENST00000325404 WDR33Q9C0J8 1336 aaKnown RBP24.04■■□□□ 1.44
SOX2-201ENST00000325404 OVOS2A0A0G2JMS6 1433 aa24.04■■□□□ 1.44
SOX2-201ENST00000325404 AKAP4Q5JQC9 854 aa24.04■■□□□ 1.44
SOX2-201ENST00000325404 CNTROBQ8N137 903 aa24.04■■□□□ 1.44
SOX2-201ENST00000325404 SYAP1Q96A49 352 aaPredicted RBP24.03■■□□□ 1.44
SOX2-201ENST00000325404 SRGAP3O43295 1099 aa24.03■■□□□ 1.44
SOX2-201ENST00000325404 HDAC5Q9UQL6 1122 aa24.03■■□□□ 1.44
SOX2-201ENST00000325404 NUTM1Q86Y26 1132 aa24.02■■□□□ 1.44
SOX2-201ENST00000325404 RBM27Q9P2N5 1060 aaKnown RBP24.02■■□□□ 1.44
SOX2-201ENST00000325404 RGPD5Q99666 1765 aa24.02■■□□□ 1.44
SOX2-201ENST00000325404 KLHL34Q8N239 644 aa24.02■■□□□ 1.44
SOX2-201ENST00000325404 ABCC6O95255 1503 aa24.01■■□□□ 1.43
SOX2-201ENST00000325404 SOS2Q07890 1332 aaPredicted RBP24.01■■□□□ 1.43
SOX2-201ENST00000325404 C1orf141Q5JVX7 400 aa24.01■■□□□ 1.43
SOX2-201ENST00000325404 TMEM87AQ8NBN3 555 aa24■■□□□ 1.43
SOX2-201ENST00000325404 LSG1Q9H089 658 aaKnown RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms