RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 SRCIN1Q9C0H9 1055 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 PAFAH1B1P43034 410 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 CEP112Q8N8E3 955 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 EXOC6BQ9Y2D4 811 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 TERF1P54274 439 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 BMS1Q14692 1282 aaKnown RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 HSP90AA4PQ58FG1 418 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 PRPF40BQ6NWY9 871 aaKnown RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 DAAM2Q86T65 1068 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 PROSER2Q86WR7 435 aaPredicted RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 CCT2P78371 535 aaKnown RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 STX1AQ16623 288 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 CFAP70Q5T0N1 1121 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 ZSCAN31Q96LW9 406 aaPredicted RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 CCDC184Q52MB2 194 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 FBF1Q8TES7 1133 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 GCC1Q96CN9 775 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 SPECC1Q5M775 1068 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 THUMPD2Q9BTF0 503 aaKnown RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 CDK19Q9BWU1 502 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 C10orf67Q8IYJ2 551 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 ZNF397Q8NF99 534 aaPredicted RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 ZSCAN12O43309 604 aa9.14□□□□□ -0.95
CIITA-201ENST00000324288 POLR3DP05423 398 aaPredicted RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 TTLL12Q14166 644 aaPredicted RBP9.14□□□□□ -0.95
CIITA-201ENST00000324288 POTEJP0CG39 1038 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 MVPQ14764 893 aaKnown RBP9.13□□□□□ -0.95
CIITA-201ENST00000324288 CAPZA3Q96KX2 299 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 CABP1Q9NZU7 370 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 PPP6R1Q9UPN7 881 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 STAMBPO95630 424 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 HSPA4P34932 840 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 METTL24Q5JXM2 366 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 MSL1Q68DK7 614 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 PDE3AQ14432 1141 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 CACNA2D4Q7Z3S7 1137 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 CRACR2BQ8N4Y2 399 aaPredicted RBP9.13□□□□□ -0.95
CIITA-201ENST00000324288 ANKIB1Q9P2G1 1089 aa9.13□□□□□ -0.95
CIITA-201ENST00000324288 SMIM23A6NLE4 172 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 AAMPQ13685 434 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 SLC12A5Q9H2X9 1139 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 RABEP2Q9H5N1 569 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 PUF60Q9UHX1 559 aaKnown RBP9.12□□□□□ -0.95
CIITA-201ENST00000324288 FSD2A1L4K1 749 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 GIMAP6Q6P9H5 292 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 MXRA7P84157 204 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 FKBP15Q5T1M5 1219 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 TMCO4Q5TGY1 634 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 TMEM57Q8N5G2 664 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 MMRN2Q9H8L6 949 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 ARID4AP29374 1257 aaPredicted RBP9.12□□□□□ -0.95
CIITA-201ENST00000324288 ANO10Q9NW15 660 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 RANBP6O60518 1105 aaKnown RBP9.12□□□□□ -0.95
CIITA-201ENST00000324288 ZSCAN23Q3MJ62 389 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 BOLA2Q9H3K6 86 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 IGHMBP2P38935 993 aaKnown RBP9.12□□□□□ -0.95
CIITA-201ENST00000324288 C20orf194Q5TEA3 1177 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 NAP1L3Q99457 506 aaPredicted RBP9.12□□□□□ -0.95
CIITA-201ENST00000324288 ZSCAN25Q6NSZ9 544 aa9.12□□□□□ -0.95
CIITA-201ENST00000324288 LARP1Q6PKG0 1096 aaKnown RBP9.12□□□□□ -0.95
CIITA-201ENST00000324288 HSF2BPO75031 334 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 NAA25Q14CX7 972 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 GIGYF2Q6Y7W6 1299 aaKnown RBP9.11□□□□□ -0.95
CIITA-201ENST00000324288 CEP126Q9P2H0 1117 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 HCLS1P14317 486 aaPredicted RBP9.11□□□□□ -0.95
CIITA-201ENST00000324288 USHBP1Q8N6Y0 703 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 BAG4O95429 457 aaKnown RBP9.11□□□□□ -0.95
CIITA-201ENST00000324288 MCM3P25205 808 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 CA8P35219 290 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 GCOM1H8Y6P7 765 aaPredicted RBP9.11□□□□□ -0.95
CIITA-201ENST00000324288 PPP1R12BO60237 982 aaPredicted RBP9.11□□□□□ -0.95
CIITA-201ENST00000324288 MYZAPP0CAP1 466 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 MYO1BO43795 1136 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 CTNNA2P26232 953 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 CCDC121Q6ZUS5 278 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 PPP1R14CQ8TAE6 165 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 MCM10Q7L590 875 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 GTF3C6Q969F1 213 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 VPS18Q9P253 973 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 TOP2AP11388 1531 aaKnown RBP9.11□□□□□ -0.95
CIITA-201ENST00000324288 CCDC12Q8WUD4 166 aaPredicted RBP9.11□□□□□ -0.95
CIITA-201ENST00000324288 DNAI1Q9UI46 699 aa9.11□□□□□ -0.95
CIITA-201ENST00000324288 TSG101Q99816 390 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 CTNNA3Q9UI47 895 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 PTCD1O75127 700 aaKnown RBP9.1□□□□□ -0.95
CIITA-201ENST00000324288 TNIP1Q15025 636 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 TSHZ3Q63HK5 1081 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 HOMER2Q9NSB8 354 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 GOLGA8BA8MQT2 603 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 SF3A3Q12874 501 aaKnown RBP eCLIP9.1□□□□□ -0.95
CIITA-201ENST00000324288 SPECC1LQ69YQ0 1117 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 SELENOSQ9BQE4 189 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 TMEM110-MUSTN1A8MSY1 372 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 PRDM11Q9NQV5 511 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 TMOD2Q9NZR1 351 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 POTEB2H3BUK9 544 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 YEATS4O95619 227 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 CUX1P39880 1505 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 A0A1W2PRG0 241 aa9.1□□□□□ -0.95
CIITA-201ENST00000324288 MKNK2Q9HBH9 465 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms