RNA–Protein interactions for RNA: ENST00000322269.10

FAM3A-201, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-201ENST00000322269 TTC5Q8N0Z6 440 aa23.47■■□□□ 1.35
FAM3A-201ENST00000322269 TMOD3Q9NYL9 352 aa23.47■■□□□ 1.35
FAM3A-201ENST00000322269 A0A0G2JS52 829 aa23.46■■□□□ 1.35
FAM3A-201ENST00000322269 ITGB4P16144 1822 aa23.46■■□□□ 1.35
FAM3A-201ENST00000322269 GIGYF1O75420 1035 aaPredicted RBP23.45■■□□□ 1.34
FAM3A-201ENST00000322269 CCDC30Q5VVM6 783 aa23.45■■□□□ 1.34
FAM3A-201ENST00000322269 ZBTB7BO15156 539 aaPredicted RBP23.45■■□□□ 1.34
FAM3A-201ENST00000322269 RGS17Q9UGC6 210 aaPredicted RBP23.45■■□□□ 1.34
FAM3A-201ENST00000322269 PAPPAQ13219 1627 aa23.44■■□□□ 1.34
FAM3A-201ENST00000322269 ONECUT3O60422 494 aaPredicted RBP23.44■■□□□ 1.34
FAM3A-201ENST00000322269 CHMP4AQ9BY43 222 aa23.44■■□□□ 1.34
FAM3A-201ENST00000322269 DAXXQ9UER7 740 aaPredicted RBP23.44■■□□□ 1.34
FAM3A-201ENST00000322269 DOT1LQ8TEK3 1739 aa23.43■■□□□ 1.34
FAM3A-201ENST00000322269 HDGFL1Q5TGJ6 251 aa23.43■■□□□ 1.34
FAM3A-201ENST00000322269 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
FAM3A-201ENST00000322269 FMNL2Q96PY5 1086 aa23.43■■□□□ 1.34
FAM3A-201ENST00000322269 STK31Q9BXU1 1019 aa23.43■■□□□ 1.34
FAM3A-201ENST00000322269 PTPRCP08575 1304 aa23.42■■□□□ 1.34
FAM3A-201ENST00000322269 SLC4A2P04920 1241 aa23.42■■□□□ 1.34
FAM3A-201ENST00000322269 SMC5Q8IY18 1101 aa23.42■■□□□ 1.34
FAM3A-201ENST00000322269 PIGBQ92521 554 aa23.42■■□□□ 1.34
FAM3A-201ENST00000322269 DEKP35659 375 aaKnown RBP23.41■■□□□ 1.34
FAM3A-201ENST00000322269 NECTIN2Q92692 538 aa23.41■■□□□ 1.34
FAM3A-201ENST00000322269 UBR2Q8IWV8 1755 aa23.41■■□□□ 1.34
FAM3A-201ENST00000322269 BCL9O00512 1426 aa23.41■■□□□ 1.34
FAM3A-201ENST00000322269 SEC24BO95487 1268 aa23.4■■□□□ 1.34
FAM3A-201ENST00000322269 EIF2S2P20042 333 aaKnown RBP23.4■■□□□ 1.34
FAM3A-201ENST00000322269 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
FAM3A-201ENST00000322269 SYTL4Q96C24 671 aaPredicted RBP23.4■■□□□ 1.34
FAM3A-201ENST00000322269 PRAMEF22A3QJZ6 481 aa23.39■■□□□ 1.33
FAM3A-201ENST00000322269 INTS3Q68E01 1043 aaKnown RBP23.39■■□□□ 1.33
FAM3A-201ENST00000322269 CACNA1FO60840 1977 aa23.39■■□□□ 1.33
FAM3A-201ENST00000322269 SNRPA1P09661 255 aaKnown RBP23.38■■□□□ 1.33
FAM3A-201ENST00000322269 POTEAQ6S8J7 498 aa23.38■■□□□ 1.33
FAM3A-201ENST00000322269 KAT6BQ8WYB5 2073 aa23.38■■□□□ 1.33
FAM3A-201ENST00000322269 C5P01031 1676 aa23.38■■□□□ 1.33
FAM3A-201ENST00000322269 SLC4A3P48751 1232 aa23.38■■□□□ 1.33
FAM3A-201ENST00000322269 SEPT12Q8IYM1 358 aa23.38■■□□□ 1.33
FAM3A-201ENST00000322269 KCPQ6ZWJ8 1503 aa23.38■■□□□ 1.33
FAM3A-201ENST00000322269 RGS12O14924 1447 aa23.37■■□□□ 1.33
FAM3A-201ENST00000322269 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
FAM3A-201ENST00000322269 ATG3Q9NT62 314 aa23.36■■□□□ 1.33
FAM3A-201ENST00000322269 ASAP1Q9ULH1 1129 aa23.36■■□□□ 1.33
FAM3A-201ENST00000322269 RBM6P78332 1123 aaKnown RBP23.36■■□□□ 1.33
FAM3A-201ENST00000322269 RXRBP28702 533 aa23.35■■□□□ 1.33
FAM3A-201ENST00000322269 PTCD1O75127 700 aaKnown RBP23.34■■□□□ 1.33
FAM3A-201ENST00000322269 UPF2Q9HAU5 1272 aaKnown RBP23.34■■□□□ 1.33
FAM3A-201ENST00000322269 CHPF2Q9P2E5 772 aa23.34■■□□□ 1.33
FAM3A-201ENST00000322269 DBF4Q9UBU7 674 aaPredicted RBP23.34■■□□□ 1.33
FAM3A-201ENST00000322269 G2E3Q7L622 706 aa23.33■■□□□ 1.33
FAM3A-201ENST00000322269 USP16Q9Y5T5 823 aa23.33■■□□□ 1.32
FAM3A-201ENST00000322269 LAMB4A4D0S4 1761 aa23.32■■□□□ 1.32
FAM3A-201ENST00000322269 FLIIQ13045 1269 aa23.31■■□□□ 1.32
FAM3A-201ENST00000322269 TBC1D32Q96NH3 1257 aa23.31■■□□□ 1.32
FAM3A-201ENST00000322269 NUCB1Q02818 461 aa23.31■■□□□ 1.32
FAM3A-201ENST00000322269 VSIG10Q8N0Z9 540 aa23.3■■□□□ 1.32
FAM3A-201ENST00000322269 KCNQ2O43526 872 aa23.29■■□□□ 1.32
FAM3A-201ENST00000322269 PHAXQ9H814 394 aaKnown RBP23.29■■□□□ 1.32
FAM3A-201ENST00000322269 RBM42Q9BTD8 480 aaKnown RBP23.29■■□□□ 1.32
FAM3A-201ENST00000322269 DDX21Q9NR30 783 aaKnown RBP eCLIP23.29■■□□□ 1.32
FAM3A-201ENST00000322269 ANXA1P04083 346 aa23.28■■□□□ 1.32
FAM3A-201ENST00000322269 FKBP5Q13451 457 aaPredicted RBP23.28■■□□□ 1.32
FAM3A-201ENST00000322269 BECN1Q14457 450 aa23.28■■□□□ 1.32
FAM3A-201ENST00000322269 FAM182BQ5T319 152 aa23.28■■□□□ 1.32
FAM3A-201ENST00000322269 PDIA6Q15084 440 aa23.27■■□□□ 1.32
FAM3A-201ENST00000322269 PROSER3Q2NL68 480 aa23.27■■□□□ 1.32
FAM3A-201ENST00000322269 GCC1Q96CN9 775 aa23.27■■□□□ 1.32
FAM3A-201ENST00000322269 HYPKQ9NX55 129 aa23.27■■□□□ 1.32
FAM3A-201ENST00000322269 TEX13AQ9BXU3 409 aaPredicted RBP23.26■■□□□ 1.31
FAM3A-201ENST00000322269 BRWD3Q6RI45 1802 aa23.26■■□□□ 1.31
FAM3A-201ENST00000322269 CCT4P50991 539 aaKnown RBP23.25■■□□□ 1.31
FAM3A-201ENST00000322269 NFKBIBQ15653 356 aa23.25■■□□□ 1.31
FAM3A-201ENST00000322269 NHSQ6T4R5 1651 aa23.25■■□□□ 1.31
FAM3A-201ENST00000322269 KRT27Q7Z3Y8 459 aa23.24■■□□□ 1.31
FAM3A-201ENST00000322269 SIRT2Q8IXJ6 389 aa23.24■■□□□ 1.31
FAM3A-201ENST00000322269 ERBB4Q15303 1308 aa23.24■■□□□ 1.31
FAM3A-201ENST00000322269 CHD1LQ86WJ1 897 aa23.24■■□□□ 1.31
FAM3A-201ENST00000322269 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
FAM3A-201ENST00000322269 C1orf115Q9H7X2 142 aa23.24■■□□□ 1.31
FAM3A-201ENST00000322269 F6X3S4 739 aa23.23■■□□□ 1.31
FAM3A-201ENST00000322269 SLC4A9Q96Q91 983 aa23.23■■□□□ 1.31
FAM3A-201ENST00000322269 SBF2Q86WG5 1849 aa23.23■■□□□ 1.31
FAM3A-201ENST00000322269 MYL6BP14649 208 aa23.22■■□□□ 1.31
FAM3A-201ENST00000322269 DNAJC10Q8IXB1 793 aa23.22■■□□□ 1.31
FAM3A-201ENST00000322269 PALLDQ8WX93 1383 aa23.22■■□□□ 1.31
FAM3A-201ENST00000322269 RPAP2Q8IXW5 612 aaPredicted RBP23.22■■□□□ 1.31
FAM3A-201ENST00000322269 STARD3NLO95772 234 aa23.21■■□□□ 1.31
FAM3A-201ENST00000322269 A1BGP04217 495 aa23.2■■□□□ 1.3
FAM3A-201ENST00000322269 SLC4A10Q6U841 1118 aa23.2■■□□□ 1.3
FAM3A-201ENST00000322269 LRP10Q7Z4F1 713 aa23.2■■□□□ 1.3
FAM3A-201ENST00000322269 TJP1Q07157 1748 aa23.2■■□□□ 1.3
FAM3A-201ENST00000322269 PIP4K2AP48426 406 aaPredicted RBP23.19■■□□□ 1.3
FAM3A-201ENST00000322269 FAM196AQ6ZSG2 479 aa23.19■■□□□ 1.3
FAM3A-201ENST00000322269 PTF1AQ7RTS3 328 aa23.19■■□□□ 1.3
FAM3A-201ENST00000322269 LNPKQ9C0E8 428 aa23.19■■□□□ 1.3
FAM3A-201ENST00000322269 BTAF1O14981 1849 aa23.19■■□□□ 1.3
FAM3A-201ENST00000322269 LOC102724428A0A0B4J2F2 783 aa23.19■■□□□ 1.3
FAM3A-201ENST00000322269 NBPF26B4DH59 902 aa23.19■■□□□ 1.3
FAM3A-201ENST00000322269 SIK1P57059 783 aa23.19■■□□□ 1.3
FAM3A-201ENST00000322269 NBPF14Q5TI25 921 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms