RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 PDRG1Q9NUG6 133 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 TBC1D2BQ9UPU7 963 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 INSRP06213 1382 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 GRM8O00222 908 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 METTL24Q5JXM2 366 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 RASSF8Q8NHQ8 419 aa13.18□□□□□ -0.3
TOP3A-201ENST00000321105 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
TOP3A-201ENST00000321105 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-201ENST00000321105 EFCAB6Q5THR3 1501 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 HAND2P61296 217 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 CCDC82Q8N4S0 544 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 ZGPATQ8N5A5 531 aaKnown RBP13.17□□□□□ -0.3
TOP3A-201ENST00000321105 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 STARD3NLO95772 234 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 A1BGP04217 495 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 GUCY1B3Q02153 619 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
TOP3A-201ENST00000321105 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-201ENST00000321105 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-201ENST00000321105 RAB11FIP3O75154 756 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 HSP90AB3PQ58FF7 597 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 KSR2Q6VAB6 950 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 NECAB1Q8N987 351 aa13.17□□□□□ -0.3
TOP3A-201ENST00000321105 KDM5AP29375 1690 aaKnown RBP13.17□□□□□ -0.3
TOP3A-201ENST00000321105 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
TOP3A-201ENST00000321105 EXOC5O00471 708 aa13.16□□□□□ -0.3
TOP3A-201ENST00000321105 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-201ENST00000321105 TRPM1Q7Z4N2 1603 aa13.16□□□□□ -0.3
TOP3A-201ENST00000321105 MYOM2P54296 1465 aa13.16□□□□□ -0.3
TOP3A-201ENST00000321105 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
TOP3A-201ENST00000321105 HTATSF1O43719 755 aaKnown RBP13.16□□□□□ -0.3
TOP3A-201ENST00000321105 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
TOP3A-201ENST00000321105 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
TOP3A-201ENST00000321105 PSMA5P28066 241 aa13.15□□□□□ -0.3
TOP3A-201ENST00000321105 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-201ENST00000321105 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
TOP3A-201ENST00000321105 HECW2Q9P2P5 1572 aa13.15□□□□□ -0.3
TOP3A-201ENST00000321105 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
TOP3A-201ENST00000321105 IFIT1P09914 478 aaKnown RBP13.15□□□□□ -0.3
TOP3A-201ENST00000321105 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
TOP3A-201ENST00000321105 KIF3AQ9Y496 699 aa13.15□□□□□ -0.3
TOP3A-201ENST00000321105 PLXNC1O60486 1568 aa13.15□□□□□ -0.31
TOP3A-201ENST00000321105 SYNE3Q6ZMZ3 975 aa13.14□□□□□ -0.31
TOP3A-201ENST00000321105 SYCE3A1L190 88 aa13.14□□□□□ -0.31
TOP3A-201ENST00000321105 BECN2A8MW95 431 aa13.14□□□□□ -0.31
TOP3A-201ENST00000321105 SLC4A8Q2Y0W8 1093 aa13.14□□□□□ -0.31
TOP3A-201ENST00000321105 LRRFIP1Q32MZ4 808 aaKnown RBP13.14□□□□□ -0.31
TOP3A-201ENST00000321105 EDC3Q96F86 508 aaKnown RBP13.14□□□□□ -0.31
TOP3A-201ENST00000321105 BTG4Q9NY30 223 aa13.14□□□□□ -0.31
TOP3A-201ENST00000321105 LDHAL6AQ6ZMR3 332 aa13.14□□□□□ -0.31
TOP3A-201ENST00000321105 CHAMP1Q96JM3 812 aa13.14□□□□□ -0.31
TOP3A-201ENST00000321105 RBM27Q9P2N5 1060 aaKnown RBP13.14□□□□□ -0.31
TOP3A-201ENST00000321105 E9PCH4 1651 aa13.14□□□□□ -0.31
TOP3A-201ENST00000321105 TIMM10P62072 90 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 CCT2P78371 535 aaKnown RBP13.13□□□□□ -0.31
TOP3A-201ENST00000321105 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 SIRT2Q8IXJ6 389 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 USP44Q9H0E7 712 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 PHF14O94880 888 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 AKAP17AQ02040 695 aaKnown RBP13.13□□□□□ -0.31
TOP3A-201ENST00000321105 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
TOP3A-201ENST00000321105 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
TOP3A-201ENST00000321105 IFIT5Q13325 482 aaKnown RBP13.13□□□□□ -0.31
TOP3A-201ENST00000321105 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
TOP3A-201ENST00000321105 DHX16O60231 1041 aaKnown RBP13.13□□□□□ -0.31
TOP3A-201ENST00000321105 MRE11P49959 708 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 FAM89AQ96GI7 184 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 ESYT1Q9BSJ8 1104 aa13.13□□□□□ -0.31
TOP3A-201ENST00000321105 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
TOP3A-201ENST00000321105 EIF4A1P60842 406 aaKnown RBP13.12□□□□□ -0.31
TOP3A-201ENST00000321105 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 CLASP1Q7Z460 1538 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 MCM2P49736 904 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 PANK2Q9BZ23 570 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 TMX4Q9H1E5 349 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-201ENST00000321105 KIF1BO60333 1816 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 CHAF1AQ13111 956 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-201ENST00000321105 CAMK4Q16566 473 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 CHST3Q7LGC8 479 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 ZNF594Q96JF6 807 aaPredicted RBP13.12□□□□□ -0.31
TOP3A-201ENST00000321105 TET3O43151 1660 aa13.12□□□□□ -0.31
TOP3A-201ENST00000321105 GRPEL1Q9HAV7 217 aa13.11□□□□□ -0.31
TOP3A-201ENST00000321105 CWC25Q9NXE8 425 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-201ENST00000321105 CROCC2H7BZ55 1655 aa13.11□□□□□ -0.31
TOP3A-201ENST00000321105 SDF4Q9BRK5 362 aa13.11□□□□□ -0.31
TOP3A-201ENST00000321105 A2ML1A8K2U0 1454 aa13.11□□□□□ -0.31
TOP3A-201ENST00000321105 PES1O00541 588 aaKnown RBP13.1□□□□□ -0.31
TOP3A-201ENST00000321105 NUP133Q8WUM0 1156 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 UNC13BO14795 1591 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 MAP3K4Q9Y6R4 1608 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 GOLGA6L19H0YKK7 550 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 HIP1O00291 1037 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 TRIM29Q14134 588 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 LRP2BPQ9P2M1 347 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 AXIN2Q9Y2T1 843 aa13.1□□□□□ -0.31
TOP3A-201ENST00000321105 SYNMO15061 1565 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms