RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 STARD3NLO95772 234 aa13.17□□□□□ -0.3
CCDC65-202ENST00000320516 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
CCDC65-202ENST00000320516 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
CCDC65-202ENST00000320516 COL15A1P39059 1388 aa13.16□□□□□ -0.3
CCDC65-202ENST00000320516 FKBP8Q14318 412 aa13.16□□□□□ -0.3
CCDC65-202ENST00000320516 MAPK8IP3Q9UPT6 1336 aa13.15□□□□□ -0.3
CCDC65-202ENST00000320516 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
CCDC65-202ENST00000320516 TAF7Q15545 349 aaPredicted RBP13.15□□□□□ -0.3
CCDC65-202ENST00000320516 YBX3P16989 372 aaKnown RBP eCLIP13.15□□□□□ -0.31
CCDC65-202ENST00000320516 YY1P25490 414 aa13.15□□□□□ -0.31
CCDC65-202ENST00000320516 GPR162Q16538 588 aa13.15□□□□□ -0.31
CCDC65-202ENST00000320516 NARFQ9UHQ1 456 aa13.15□□□□□ -0.31
CCDC65-202ENST00000320516 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
CCDC65-202ENST00000320516 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
CCDC65-202ENST00000320516 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
CCDC65-202ENST00000320516 TM4SF1P30408 202 aa13.14□□□□□ -0.31
CCDC65-202ENST00000320516 DDR1Q08345 913 aa13.14□□□□□ -0.31
CCDC65-202ENST00000320516 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
CCDC65-202ENST00000320516 BCL2L12Q9HB09 334 aa13.14□□□□□ -0.31
CCDC65-202ENST00000320516 PRAMEF22A3QJZ6 481 aa13.13□□□□□ -0.31
CCDC65-202ENST00000320516 ZPR1O75312 459 aa13.13□□□□□ -0.31
CCDC65-202ENST00000320516 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
CCDC65-202ENST00000320516 MIS18AQ9NYP9 233 aa13.13□□□□□ -0.31
CCDC65-202ENST00000320516 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
CCDC65-202ENST00000320516 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
CCDC65-202ENST00000320516 A1BGP04217 495 aa13.12□□□□□ -0.31
CCDC65-202ENST00000320516 SNRPA1P09661 255 aaKnown RBP13.12□□□□□ -0.31
CCDC65-202ENST00000320516 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
CCDC65-202ENST00000320516 PARP3Q9Y6F1 533 aa13.12□□□□□ -0.31
CCDC65-202ENST00000320516 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
CCDC65-202ENST00000320516 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
CCDC65-202ENST00000320516 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
CCDC65-202ENST00000320516 PELP1Q8IZL8 1130 aaKnown RBP13.12□□□□□ -0.31
CCDC65-202ENST00000320516 ADAMTS8Q9UP79 889 aa13.12□□□□□ -0.31
CCDC65-202ENST00000320516 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
CCDC65-202ENST00000320516 A0A087WZG4 1122 aa13.11□□□□□ -0.31
CCDC65-202ENST00000320516 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
CCDC65-202ENST00000320516 RIPK4P57078 832 aa13.11□□□□□ -0.31
CCDC65-202ENST00000320516 TGFB2P61812 414 aa13.11□□□□□ -0.31
CCDC65-202ENST00000320516 PNISRQ8TF01 805 aaKnown RBP13.11□□□□□ -0.31
CCDC65-202ENST00000320516 CHD4Q14839 1912 aa13.1□□□□□ -0.31
CCDC65-202ENST00000320516 NFIXQ14938 502 aa13.1□□□□□ -0.31
CCDC65-202ENST00000320516 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC65-202ENST00000320516 CCDC146Q8IYE0 955 aa13.1□□□□□ -0.31
CCDC65-202ENST00000320516 GRIN3BO60391 1043 aa13.09□□□□□ -0.31
CCDC65-202ENST00000320516 RUNDC1Q96C34 613 aa13.09□□□□□ -0.31
CCDC65-202ENST00000320516 SCN7AQ01118 1682 aa13.09□□□□□ -0.31
CCDC65-202ENST00000320516 EIF4A1P60842 406 aaKnown RBP13.09□□□□□ -0.31
CCDC65-202ENST00000320516 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
CCDC65-202ENST00000320516 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
CCDC65-202ENST00000320516 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
CCDC65-202ENST00000320516 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
CCDC65-202ENST00000320516 NBPF10Q6P3W6 841 aaKnown RBP13.08□□□□□ -0.32
CCDC65-202ENST00000320516 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
CCDC65-202ENST00000320516 TBC1D2BQ9UPU7 963 aa13.08□□□□□ -0.32
CCDC65-202ENST00000320516 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
CCDC65-202ENST00000320516 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
CCDC65-202ENST00000320516 A0A0G2JLW4 131 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 CAMTA2O94983 1202 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 KCNA3P22001 575 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 WWC3Q9ULE0 1092 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 ZNF330Q9Y3S2 320 aaPredicted RBP13.07□□□□□ -0.32
CCDC65-202ENST00000320516 LAMB4A4D0S4 1761 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 DPEP1P16444 411 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 BABAM1Q9NWV8 329 aa13.07□□□□□ -0.32
CCDC65-202ENST00000320516 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
CCDC65-202ENST00000320516 SERPINB2P05120 415 aa13.06□□□□□ -0.32
CCDC65-202ENST00000320516 CCDC184Q52MB2 194 aa13.06□□□□□ -0.32
CCDC65-202ENST00000320516 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
CCDC65-202ENST00000320516 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
CCDC65-202ENST00000320516 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
CCDC65-202ENST00000320516 NEUROD2Q15784 382 aa13.05□□□□□ -0.32
CCDC65-202ENST00000320516 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
CCDC65-202ENST00000320516 TSPYL4Q9UJ04 414 aa13.05□□□□□ -0.32
CCDC65-202ENST00000320516 NPM2Q86SE8 214 aaKnown RBP13.04□□□□□ -0.32
CCDC65-202ENST00000320516 ZNF784Q8NCA9 323 aaPredicted RBP13.04□□□□□ -0.32
CCDC65-202ENST00000320516 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
CCDC65-202ENST00000320516 CHL1O00533 1208 aa13.03□□□□□ -0.32
CCDC65-202ENST00000320516 RGL2O15211 777 aa13.03□□□□□ -0.32
CCDC65-202ENST00000320516 CHRNA5P30532 468 aa13.03□□□□□ -0.32
CCDC65-202ENST00000320516 CLEC4GQ6UXB4 293 aa13.03□□□□□ -0.32
CCDC65-202ENST00000320516 CARMIL3Q8ND23 1372 aa13.03□□□□□ -0.32
CCDC65-202ENST00000320516 BCS1LQ9Y276 419 aa13.02□□□□□ -0.32
CCDC65-202ENST00000320516 APAF1O14727 1248 aa13.02□□□□□ -0.33
CCDC65-202ENST00000320516 PIM2Q9P1W9 311 aa13.02□□□□□ -0.33
CCDC65-202ENST00000320516 PRR5LQ6MZQ0 368 aa13.01□□□□□ -0.33
CCDC65-202ENST00000320516 LRP10Q7Z4F1 713 aa13.01□□□□□ -0.33
CCDC65-202ENST00000320516 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
CCDC65-202ENST00000320516 ERBB4Q15303 1308 aa13□□□□□ -0.33
CCDC65-202ENST00000320516 ARFGEF1Q9Y6D6 1849 aa13□□□□□ -0.33
CCDC65-202ENST00000320516 ADCY9O60503 1353 aa13□□□□□ -0.33
CCDC65-202ENST00000320516 ANP32CO43423 234 aa12.99□□□□□ -0.33
CCDC65-202ENST00000320516 PDIA6Q15084 440 aa12.99□□□□□ -0.33
CCDC65-202ENST00000320516 HLFQ16534 295 aa12.99□□□□□ -0.33
CCDC65-202ENST00000320516 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
CCDC65-202ENST00000320516 ZNF652Q9Y2D9 606 aa12.99□□□□□ -0.33
CCDC65-202ENST00000320516 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
CCDC65-202ENST00000320516 ERVV-1B6SEH8 477 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms