RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 SAFB2Q14151 953 aaKnown RBP eCLIP4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 PDIA6Q15084 440 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 KCNV2Q8TDN2 545 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 IP6K1Q92551 441 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 EPAS1Q99814 870 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 PAPPAQ13219 1627 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 GLI3P10071 1580 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 SOWAHBA6NEL2 793 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 PADI6Q6TGC4 694 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 MORC1Q86VD1 984 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 ARHGEF25Q86VW2 580 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 PRKRIP1Q9H875 184 aaPredicted RBP4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 MRC1P22897 1456 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 ABTB2Q8N961 1025 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 IRX2Q9BZI1 471 aaPredicted RBP4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 DISP2A7MBM2 1401 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 NHSQ6T4R5 1651 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 QSER1Q2KHR3 1735 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 SEMA3EO15041 775 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 NUDCQ9Y266 331 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 RGPD2P0DJD1 1756 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 KCNC4Q03721 635 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 CAMK2BQ13554 666 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 FNBP4Q8N3X1 1017 aaPredicted RBP4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 CACNA1FO60840 1977 aa4.41□□□□□ -1.7
SCAMP1-201ENST00000320280 GCP02774 474 aa4.4□□□□□ -1.7
SCAMP1-201ENST00000320280 NKX2-3Q8TAU0 364 aa4.4□□□□□ -1.7
SCAMP1-201ENST00000320280 TATDN2Q93075 761 aa4.4□□□□□ -1.7
SCAMP1-201ENST00000320280 DLG5Q8TDM6 1919 aa4.4□□□□□ -1.7
SCAMP1-201ENST00000320280 FOXO3O43524 673 aa4.4□□□□□ -1.7
SCAMP1-201ENST00000320280 BARGINQ6ZT62 677 aa4.4□□□□□ -1.7
SCAMP1-201ENST00000320280 WDR17Q8IZU2 1322 aa4.4□□□□□ -1.7
SCAMP1-201ENST00000320280 IGSF1Q8N6C5 1336 aa4.4□□□□□ -1.7
SCAMP1-201ENST00000320280 TNS2Q63HR2 1409 aa4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 LAMB4A4D0S4 1761 aa4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 HTATSF1O43719 755 aaKnown RBP4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 PPP2R1AP30153 589 aa4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 SWT1Q5T5J6 900 aaKnown RBP4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 ZNF772Q68DY9 489 aaPredicted RBP4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 PMFBP1Q8TBY8 1022 aa4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 KDM3BQ7LBC6 1761 aa4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 UBR2Q8IWV8 1755 aa4.4□□□□□ -1.71
SCAMP1-201ENST00000320280 PRSS12P56730 875 aa4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 SOS1Q07889 1333 aaPredicted RBP4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 SBF2Q86WG5 1849 aa4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 VPS72Q15906 364 aa4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 NME9Q86XW9 330 aa4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 CARD10Q9BWT7 1032 aa4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 BABAM1Q9NWV8 329 aa4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 TSR3Q9UJK0 312 aaKnown RBP4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 HOXC9P31274 260 aa4.39□□□□□ -1.71
SCAMP1-201ENST00000320280 MAP3K19Q56UN5 1328 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 NBPF26B4DH59 902 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 FCHSD2O94868 740 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 AMOTQ4VCS5 1084 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 POLKQ9UBT6 870 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 RREB1Q92766 1687 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 BCL9LQ86UU0 1499 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 KIAA0232Q92628 1395 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 LMOD3Q0VAK6 560 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 DDX10Q13206 875 aaKnown RBP4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 CCDC27Q2M243 656 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 DIEXFQ68CQ4 756 aaKnown RBP4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 N4BP2Q86UW6 1770 aaPredicted RBP4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 DIAPH1O60610 1272 aaKnown RBP4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 HSP90AB1P08238 724 aaKnown RBP4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 OSBPP22059 807 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 MTRQ99707 1265 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 CHMP4AQ9BY43 222 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 LY75O60449 1722 aa4.38□□□□□ -1.71
SCAMP1-201ENST00000320280 ONECUT3O60422 494 aaPredicted RBP4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 HSPA1LP34931 641 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 CALD1Q05682 793 aaKnown RBP4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 PUS10Q3MIT2 529 aaKnown RBP4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 UNC5CLQ8IV45 518 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 C5P01031 1676 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 ITGB4P16144 1822 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 SPATA31A5Q5VU36 1347 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 SPATA31A7Q8IWB4 1347 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 IL13P35225 146 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 AMPHP49418 695 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 PRKD2Q9BZL6 878 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 TRPC5Q9UL62 973 aaPredicted RBP4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 IL16Q14005 1332 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 SPDYE16A6NNV3 312 aaPredicted RBP4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 NEFMP07197 916 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 APLP1P51693 650 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 PRDM11Q9NQV5 511 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 DOT1LQ8TEK3 1739 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 TNS1Q9HBL0 1735 aaKnown RBP4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 BRWD3Q6RI45 1802 aa4.37□□□□□ -1.71
SCAMP1-201ENST00000320280 RBM26Q5T8P6 1007 aaKnown RBP4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.36□□□□□ -1.711e-6■■■■□ 19.6
SCAMP1-201ENST00000320280 GAS2L2Q8NHY3 880 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 GGNBP2Q9H3C7 697 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 SPATA31A1Q5TZJ5 1347 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 RGS12O14924 1447 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 SLC4A5Q9BY07 1137 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 TOGARAM1Q9Y4F4 1720 aa4.36□□□□□ -1.71
SCAMP1-201ENST00000320280 TLL1O43897 1013 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms