RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 RIPK4P57078 832 aa38.42■■■■□ 3.74
SYNGR1-202ENST00000318801 SOS1Q07889 1333 aaPredicted RBP38.4■■■■□ 3.74
SYNGR1-202ENST00000318801 CANXP27824 592 aaKnown RBP38.4■■■■□ 3.74
SYNGR1-202ENST00000318801 KCNQ3O43525 872 aa38.39■■■■□ 3.74
SYNGR1-202ENST00000318801 RUNDC1Q96C34 613 aa38.39■■■■□ 3.74
SYNGR1-202ENST00000318801 ZBTB1Q9Y2K1 713 aa38.39■■■■□ 3.74
SYNGR1-202ENST00000318801 SNRPA1P09661 255 aaKnown RBP38.38■■■■□ 3.73
SYNGR1-202ENST00000318801 GPR162Q16538 588 aa38.38■■■■□ 3.73
SYNGR1-202ENST00000318801 ADAMTS8Q9UP79 889 aa38.38■■■■□ 3.73
SYNGR1-202ENST00000318801 PARP3Q9Y6F1 533 aa38.38■■■■□ 3.73
SYNGR1-202ENST00000318801 USP42Q9H9J4 1324 aaKnown RBP38.38■■■■□ 3.73
SYNGR1-202ENST00000318801 A0A087WZG4 1122 aa38.37■■■■□ 3.73
SYNGR1-202ENST00000318801 TMPOP42166 694 aaKnown RBP38.36■■■■□ 3.73
SYNGR1-202ENST00000318801 ANP32CO43423 234 aa38.35■■■■□ 3.73
SYNGR1-202ENST00000318801 CCDC146Q8IYE0 955 aa38.35■■■■□ 3.73
SYNGR1-202ENST00000318801 NLGN2Q8NFZ4 835 aa38.34■■■■□ 3.73
SYNGR1-202ENST00000318801 SRP68Q9UHB9 627 aaKnown RBP38.34■■■■□ 3.73
SYNGR1-202ENST00000318801 COL15A1P39059 1388 aa38.34■■■■□ 3.73
SYNGR1-202ENST00000318801 C4AP0C0L4 1744 aa38.34■■■■□ 3.73
SYNGR1-202ENST00000318801 NARFQ9UHQ1 456 aa38.33■■■■□ 3.73
SYNGR1-202ENST00000318801 PELP1Q8IZL8 1130 aaKnown RBP38.32■■■■□ 3.73
SYNGR1-202ENST00000318801 MIS18AQ9NYP9 233 aa38.32■■■■□ 3.73
SYNGR1-202ENST00000318801 IL6STP40189 918 aaPredicted RBP38.31■■■■□ 3.72
SYNGR1-202ENST00000318801 USPL1Q5W0Q7 1092 aa38.31■■■■□ 3.72
SYNGR1-202ENST00000318801 THUMPD2Q9BTF0 503 aaKnown RBP38.31■■■■□ 3.72
SYNGR1-202ENST00000318801 ZNF330Q9Y3S2 320 aaPredicted RBP38.31■■■■□ 3.72
SYNGR1-202ENST00000318801 EIF5P55010 431 aaKnown RBP38.3■■■■□ 3.72
SYNGR1-202ENST00000318801 NEUROD2Q15784 382 aa38.3■■■■□ 3.72
SYNGR1-202ENST00000318801 FKBP8Q14318 412 aa38.29■■■■□ 3.72
SYNGR1-202ENST00000318801 USP16Q9Y5T5 823 aa38.28■■■■□ 3.72
SYNGR1-202ENST00000318801 A1BGP04217 495 aa38.27■■■■□ 3.72
SYNGR1-202ENST00000318801 RRP7AQ9Y3A4 280 aaKnown RBP38.26■■■■□ 3.72
SYNGR1-202ENST00000318801 BABAM1Q9NWV8 329 aa38.25■■■■□ 3.71
SYNGR1-202ENST00000318801 TSPYL4Q9UJ04 414 aa38.23■■■■□ 3.71
SYNGR1-202ENST00000318801 GRIN3BO60391 1043 aa38.22■■■■□ 3.71
SYNGR1-202ENST00000318801 YY1P25490 414 aa38.2■■■■□ 3.71
SYNGR1-202ENST00000318801 TGFB2P61812 414 aa38.2■■■■□ 3.71
SYNGR1-202ENST00000318801 TM4SF1P30408 202 aa38.19■■■■□ 3.7
SYNGR1-202ENST00000318801 EIF4A1P60842 406 aaKnown RBP38.19■■■■□ 3.7
SYNGR1-202ENST00000318801 PRAMEF22A3QJZ6 481 aa38.19■■■■□ 3.7
SYNGR1-202ENST00000318801 TBC1D2BQ9UPU7 963 aa38.19■■■■□ 3.7
SYNGR1-202ENST00000318801 GIGYF1O75420 1035 aaPredicted RBP38.17■■■■□ 3.7
SYNGR1-202ENST00000318801 KDM3BQ7LBC6 1761 aa38.17■■■■□ 3.7
SYNGR1-202ENST00000318801 GOLGB1Q14789 3259 aaKnown RBP38.14■■■■□ 3.7
SYNGR1-202ENST00000318801 POLRMTO00411 1230 aaKnown RBP38.14■■■■□ 3.7
SYNGR1-202ENST00000318801 DDR1Q08345 913 aa38.14■■■■□ 3.7
SYNGR1-202ENST00000318801 NFIXQ14938 502 aa38.14■■■■□ 3.7
SYNGR1-202ENST00000318801 DZIP3Q86Y13 1208 aaKnown RBP38.14■■■■□ 3.7
SYNGR1-202ENST00000318801 MRS2Q9HD23 443 aa38.13■■■■□ 3.69
SYNGR1-202ENST00000318801 BCL2L12Q9HB09 334 aa38.12■■■■□ 3.69
SYNGR1-202ENST00000318801 TRIM35Q9UPQ4 493 aa38.12■■■■□ 3.69
SYNGR1-202ENST00000318801 UTRNP46939 3433 aa38.12■■■■□ 3.69
SYNGR1-202ENST00000318801 C10orf71Q711Q0 1435 aa38.11■■■■□ 3.69
SYNGR1-202ENST00000318801 APAF1O14727 1248 aa38.11■■■■□ 3.69
SYNGR1-202ENST00000318801 LAS1LQ9Y4W2 734 aaKnown RBP38.11■■■■□ 3.69
SYNGR1-202ENST00000318801 PIP4K2AP48426 406 aaPredicted RBP38.1■■■■□ 3.69
SYNGR1-202ENST00000318801 CALD1Q05682 793 aaKnown RBP38.1■■■■□ 3.69
SYNGR1-202ENST00000318801 ZNF652Q9Y2D9 606 aa38.1■■■■□ 3.69
SYNGR1-202ENST00000318801 KIF13BQ9NQT8 1826 aa38.1■■■■□ 3.69
SYNGR1-202ENST00000318801 CHD4Q14839 1912 aa38.1■■■■□ 3.69
SYNGR1-202ENST00000318801 BICDL1Q6ZP65 573 aa38.09■■■■□ 3.69
SYNGR1-202ENST00000318801 YBX3P16989 372 aaKnown RBP eCLIP38.08■■■■□ 3.69
SYNGR1-202ENST00000318801 SERPINB2P05120 415 aa38.07■■■■□ 3.69
SYNGR1-202ENST00000318801 A0A0G2JLW4 131 aa38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 CCDC184Q52MB2 194 aa38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 CLEC4GQ6UXB4 293 aa38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 SETDB2Q96T68 719 aa38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 NBPF26B4DH59 902 aa38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 CHL1O00533 1208 aa38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 CAMTA2O94983 1202 aa38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 NBPF10Q6P3W6 841 aaKnown RBP38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 NBPF15Q8N660 670 aa38.06■■■■□ 3.68
SYNGR1-202ENST00000318801 LAMB4A4D0S4 1761 aa38.05■■■■□ 3.68
SYNGR1-202ENST00000318801 TBC1D9BQ66K14 1250 aa38.04■■■■□ 3.68
SYNGR1-202ENST00000318801 NPHP1O15259 732 aa38.03■■■■□ 3.68
SYNGR1-202ENST00000318801 DPEP1P16444 411 aa38.03■■■■□ 3.68
SYNGR1-202ENST00000318801 ERBB4Q15303 1308 aa38.02■■■■□ 3.68
SYNGR1-202ENST00000318801 RGL2O15211 777 aa38.02■■■■□ 3.68
SYNGR1-202ENST00000318801 WWC3Q9ULE0 1092 aa38.02■■■■□ 3.68
SYNGR1-202ENST00000318801 PXDNLA1KZ92 1463 aa38.02■■■■□ 3.68
SYNGR1-202ENST00000318801 CFAP44Q96MT7 982 aa38.01■■■■□ 3.68
SYNGR1-202ENST00000318801 CARMIL3Q8ND23 1372 aa38■■■■□ 3.67
SYNGR1-202ENST00000318801 PIM2Q9P1W9 311 aa38■■■■□ 3.67
SYNGR1-202ENST00000318801 SCN7AQ01118 1682 aa38■■■■□ 3.67
SYNGR1-202ENST00000318801 EIF2S2P20042 333 aaKnown RBP37.99■■■■□ 3.67
SYNGR1-202ENST00000318801 NGEFQ8N5V2 710 aa37.99■■■■□ 3.67
SYNGR1-202ENST00000318801 N4BP2Q86UW6 1770 aaPredicted RBP37.99■■■■□ 3.67
SYNGR1-202ENST00000318801 MYL6BP14649 208 aa37.98■■■■□ 3.67
SYNGR1-202ENST00000318801 BCS1LQ9Y276 419 aa37.98■■■■□ 3.67
SYNGR1-202ENST00000318801 KIF6Q6ZMV9 814 aa37.97■■■■□ 3.67
SYNGR1-202ENST00000318801 AFDNP55196 1824 aaKnown RBP37.97■■■■□ 3.67
SYNGR1-202ENST00000318801 GNAI1P63096 354 aa37.95■■■■□ 3.67
SYNGR1-202ENST00000318801 PDZRN3Q9UPQ7 1066 aa37.93■■■■□ 3.66
SYNGR1-202ENST00000318801 ERVV-1B6SEH8 477 aa37.93■■■■□ 3.66
SYNGR1-202ENST00000318801 DALRD3Q5D0E6 543 aaKnown RBP37.93■■■■□ 3.66
SYNGR1-202ENST00000318801 CNBD1Q8NA66 436 aa37.93■■■■□ 3.66
SYNGR1-202ENST00000318801 IFT57Q9NWB7 429 aa37.93■■■■□ 3.66
SYNGR1-202ENST00000318801 BCORQ6W2J9 1755 aa37.92■■■■□ 3.66
SYNGR1-202ENST00000318801 NRXN2Q9P2S2 1712 aa37.92■■■■□ 3.66
SYNGR1-202ENST00000318801 H0YIN7 160 aa37.91■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 468.7 ms