RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 PRDM11Q9NQV5 511 aa13.7□□□□□ -0.22
EFCAB11-201ENST00000316738 PI4KAP2A4QPH2 592 aa13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 PROSER3Q2NL68 480 aa13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 PI4KAP1Q8N8J0 262 aa13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 SRCIN1Q9C0H9 1055 aa13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 SALL3Q9BXA9 1300 aa13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 NKX1-1Q15270 411 aaPredicted RBP13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 UPF2Q9HAU5 1272 aaKnown RBP13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 HYPKQ9NX55 129 aa13.69□□□□□ -0.22
EFCAB11-201ENST00000316738 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
EFCAB11-201ENST00000316738 C16orf71Q8IYS4 520 aaPredicted RBP13.68□□□□□ -0.22
EFCAB11-201ENST00000316738 DDX21Q9NR30 783 aaKnown RBP eCLIP13.68□□□□□ -0.22
EFCAB11-201ENST00000316738 POLA2Q14181 598 aa13.68□□□□□ -0.22
EFCAB11-201ENST00000316738 TTC22Q5TAA0 569 aa13.68□□□□□ -0.22
EFCAB11-201ENST00000316738 LRP10Q7Z4F1 713 aa13.68□□□□□ -0.22
EFCAB11-201ENST00000316738 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
EFCAB11-201ENST00000316738 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 ANXA1P04083 346 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 RBM25P49756 843 aaKnown RBP13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 KSR2Q6VAB6 950 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 COL16A1Q07092 1604 aaPredicted RBP13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 BCL11AQ9H165 835 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 PLCH1Q4KWH8 1693 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
EFCAB11-201ENST00000316738 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
EFCAB11-201ENST00000316738 OTUD7AQ8TE49 926 aaPredicted RBP13.66□□□□□ -0.22
EFCAB11-201ENST00000316738 UTYO14607 1347 aa13.66□□□□□ -0.22
EFCAB11-201ENST00000316738 KCPQ6ZWJ8 1503 aa13.66□□□□□ -0.22
EFCAB11-201ENST00000316738 ALDH1L1O75891 902 aa13.66□□□□□ -0.22
EFCAB11-201ENST00000316738 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
EFCAB11-201ENST00000316738 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
EFCAB11-201ENST00000316738 ZCRB1Q8TBF4 217 aaKnown RBP13.65□□□□□ -0.22
EFCAB11-201ENST00000316738 ZNF496Q96IT1 587 aaPredicted RBP13.65□□□□□ -0.22
EFCAB11-201ENST00000316738 NBPF7P0C2Y1 421 aaPredicted RBP13.65□□□□□ -0.22
EFCAB11-201ENST00000316738 MTX1Q13505 466 aa13.65□□□□□ -0.22
EFCAB11-201ENST00000316738 TPRNQ4KMQ1 711 aa13.65□□□□□ -0.22
EFCAB11-201ENST00000316738 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
EFCAB11-201ENST00000316738 TOM1L2Q6ZVM7 507 aa13.65□□□□□ -0.22
EFCAB11-201ENST00000316738 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
EFCAB11-201ENST00000316738 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
EFCAB11-201ENST00000316738 IL2RBP14784 551 aa13.64□□□□□ -0.23
EFCAB11-201ENST00000316738 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
EFCAB11-201ENST00000316738 MAP3K2Q9Y2U5 619 aa13.64□□□□□ -0.23
EFCAB11-201ENST00000316738 TNS2Q63HR2 1409 aa13.64□□□□□ -0.23
EFCAB11-201ENST00000316738 MFAP1P55081 439 aaKnown RBP13.64□□□□□ -0.23
EFCAB11-201ENST00000316738 LARP1Q6PKG0 1096 aaKnown RBP13.64□□□□□ -0.23
EFCAB11-201ENST00000316738 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
EFCAB11-201ENST00000316738 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
EFCAB11-201ENST00000316738 DISP2A7MBM2 1401 aa13.63□□□□□ -0.23
EFCAB11-201ENST00000316738 CDC45O75419 566 aa13.63□□□□□ -0.23
EFCAB11-201ENST00000316738 CABP4P57796 275 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 FMNL2Q96PY5 1086 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 LRRCC1Q9C099 1032 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 EXOC6BQ9Y2D4 811 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 PDE1AP54750 535 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 STAP2Q9UGK3 403 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 USP16Q9Y5T5 823 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 NUP188Q5SRE5 1749 aa13.62□□□□□ -0.23
EFCAB11-201ENST00000316738 RAB11FIP3O75154 756 aa13.61□□□□□ -0.23
EFCAB11-201ENST00000316738 SDSP20132 328 aa13.61□□□□□ -0.23
EFCAB11-201ENST00000316738 KIF2CQ99661 725 aa13.61□□□□□ -0.23
EFCAB11-201ENST00000316738 DDX58O95786 925 aaKnown RBP13.6□□□□□ -0.23
EFCAB11-201ENST00000316738 TBC1D2Q9BYX2 928 aa13.6□□□□□ -0.23
EFCAB11-201ENST00000316738 LRP6O75581 1613 aa13.6□□□□□ -0.23
EFCAB11-201ENST00000316738 IGKV5-2P06315 115 aa13.6□□□□□ -0.23
EFCAB11-201ENST00000316738 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
EFCAB11-201ENST00000316738 ERBB4Q15303 1308 aa13.6□□□□□ -0.23
EFCAB11-201ENST00000316738 BECN1Q14457 450 aa13.6□□□□□ -0.23
EFCAB11-201ENST00000316738 AOX1Q06278 1338 aa13.59□□□□□ -0.23
EFCAB11-201ENST00000316738 NRAPQ86VF7 1730 aa13.59□□□□□ -0.23
EFCAB11-201ENST00000316738 KAZALD1Q96I82 304 aa13.59□□□□□ -0.23
EFCAB11-201ENST00000316738 ITGB4P16144 1822 aa13.59□□□□□ -0.23
EFCAB11-201ENST00000316738 AFDNP55196 1824 aaKnown RBP13.59□□□□□ -0.23
EFCAB11-201ENST00000316738 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
EFCAB11-201ENST00000316738 CWF19L2Q2TBE0 894 aaKnown RBP13.59□□□□□ -0.23
EFCAB11-201ENST00000316738 COL15A1P39059 1388 aa13.58□□□□□ -0.23
EFCAB11-201ENST00000316738 APBB1O00213 710 aa13.58□□□□□ -0.23
EFCAB11-201ENST00000316738 XAGE3Q8WTP9 111 aa13.58□□□□□ -0.24
EFCAB11-201ENST00000316738 METTL22Q9BUU2 404 aaPredicted RBP13.58□□□□□ -0.24
EFCAB11-201ENST00000316738 DAXXQ9UER7 740 aaPredicted RBP13.58□□□□□ -0.24
EFCAB11-201ENST00000316738 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
EFCAB11-201ENST00000316738 EVA1CP58658 441 aa13.58□□□□□ -0.24
EFCAB11-201ENST00000316738 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
EFCAB11-201ENST00000316738 ANTXR1Q9H6X2 564 aa13.58□□□□□ -0.24
EFCAB11-201ENST00000316738 STRN4Q9NRL3 753 aa13.58□□□□□ -0.24
EFCAB11-201ENST00000316738 PHLPP1O60346 1717 aa13.57□□□□□ -0.24
EFCAB11-201ENST00000316738 GRM8O00222 908 aa13.57□□□□□ -0.24
EFCAB11-201ENST00000316738 MX1P20591 662 aa13.57□□□□□ -0.24
EFCAB11-201ENST00000316738 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
EFCAB11-201ENST00000316738 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
EFCAB11-201ENST00000316738 NEURL1BA8MQ27 555 aa13.57□□□□□ -0.24
EFCAB11-201ENST00000316738 SNX21Q969T3 373 aa13.57□□□□□ -0.24
EFCAB11-201ENST00000316738 USP42Q9H9J4 1324 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms