RNA–Protein interactions for RNA: ENST00000316461.8

TTC9C-202, Transcript of tetratricopeptide repeat domain 9C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC9C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-202ENST00000316461 MTHFSDQ2M296 383 aaKnown RBP10.38□□□□□ -0.75
TTC9C-202ENST00000316461 CFAP53Q96M91 514 aa10.38□□□□□ -0.75
TTC9C-202ENST00000316461 RNF181Q9P0P0 153 aa10.38□□□□□ -0.75
TTC9C-202ENST00000316461 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
TTC9C-202ENST00000316461 KDM6AO15550 1401 aaPredicted RBP10.38□□□□□ -0.75
TTC9C-202ENST00000316461 NCAPD2Q15021 1401 aa10.38□□□□□ -0.75
TTC9C-202ENST00000316461 PKD1L3Q7Z443 1732 aa10.38□□□□□ -0.75
TTC9C-202ENST00000316461 UBR3Q6ZT12 1888 aa10.38□□□□□ -0.75
TTC9C-202ENST00000316461 NPC1L1Q9UHC9 1359 aa10.38□□□□□ -0.75
TTC9C-202ENST00000316461 KCNA3P22001 575 aa10.37□□□□□ -0.75
TTC9C-202ENST00000316461 USP42Q9H9J4 1324 aaKnown RBP10.36□□□□□ -0.75
TTC9C-202ENST00000316461 STARD3NLO95772 234 aa10.36□□□□□ -0.75
TTC9C-202ENST00000316461 INTS5Q6P9B9 1019 aaKnown RBP10.36□□□□□ -0.75
TTC9C-202ENST00000316461 ZNF622Q969S3 477 aaKnown RBP eCLIP10.36□□□□□ -0.75
TTC9C-202ENST00000316461 KDRP35968 1356 aa10.36□□□□□ -0.75
TTC9C-202ENST00000316461 SERPINB2P05120 415 aa10.35□□□□□ -0.75
TTC9C-202ENST00000316461 CYP19A1P11511 503 aaPredicted RBP10.35□□□□□ -0.75
TTC9C-202ENST00000316461 DDR1Q08345 913 aa10.35□□□□□ -0.75
TTC9C-202ENST00000316461 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
TTC9C-202ENST00000316461 SMC1BQ8NDV3 1235 aa10.35□□□□□ -0.75
TTC9C-202ENST00000316461 NUDCQ9Y266 331 aa10.35□□□□□ -0.75
TTC9C-202ENST00000316461 ZBTB1Q9Y2K1 713 aa10.35□□□□□ -0.75
TTC9C-202ENST00000316461 KDM2BQ8NHM5 1336 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 C10orf71Q711Q0 1435 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 A0A087WZG4 1122 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 H0YIN7 160 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 POLRMTO00411 1230 aaKnown RBP10.34□□□□□ -0.75
TTC9C-202ENST00000316461 FOXN1O15353 648 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 NEFMP07197 916 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 RASSF7Q02833 373 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 C2CD5Q86YS7 1000 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 CCDC24Q8N4L8 307 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 GAS2L2Q8NHY3 880 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 RTF1Q92541 710 aaKnown RBP10.34□□□□□ -0.75
TTC9C-202ENST00000316461 MKRN1Q9UHC7 482 aaKnown RBP10.34□□□□□ -0.75
TTC9C-202ENST00000316461 NARFQ9UHQ1 456 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 TBC1D2BQ9UPU7 963 aa10.34□□□□□ -0.75
TTC9C-202ENST00000316461 BTBD11A6QL63 1104 aa10.33□□□□□ -0.76
TTC9C-202ENST00000316461 U2AF1L5P0DN76 240 aaPredicted RBP10.33□□□□□ -0.76
TTC9C-202ENST00000316461 ZEB1P37275 1124 aaPredicted RBP10.33□□□□□ -0.76
TTC9C-202ENST00000316461 U2AF1Q01081 240 aaKnown RBP eCLIP10.33□□□□□ -0.76
TTC9C-202ENST00000316461 NFIXQ14938 502 aa10.33□□□□□ -0.76
TTC9C-202ENST00000316461 PLEKHG2Q9H7P9 1386 aa10.33□□□□□ -0.76
TTC9C-202ENST00000316461 KIF13BQ9NQT8 1826 aa10.33□□□□□ -0.76
TTC9C-202ENST00000316461 ANKRD26Q9UPS8 1709 aa10.33□□□□□ -0.76
TTC9C-202ENST00000316461 COL15A1P39059 1388 aa10.32□□□□□ -0.76
TTC9C-202ENST00000316461 TM4SF1P30408 202 aa10.32□□□□□ -0.76
TTC9C-202ENST00000316461 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
TTC9C-202ENST00000316461 FMNL2Q96PY5 1086 aa10.32□□□□□ -0.76
TTC9C-202ENST00000316461 TEX13AQ9BXU3 409 aaPredicted RBP10.32□□□□□ -0.76
TTC9C-202ENST00000316461 SOS1Q07889 1333 aaPredicted RBP10.32□□□□□ -0.76
TTC9C-202ENST00000316461 FAM177BA6PVY3 158 aa10.31□□□□□ -0.76
TTC9C-202ENST00000316461 PRKAR2BP31323 418 aa10.31□□□□□ -0.76
TTC9C-202ENST00000316461 A1BGP04217 495 aa10.3□□□□□ -0.76
TTC9C-202ENST00000316461 GTF2E1P29083 439 aaPredicted RBP10.3□□□□□ -0.76
TTC9C-202ENST00000316461 PIP4K2AP48426 406 aaPredicted RBP10.3□□□□□ -0.76
TTC9C-202ENST00000316461 ZNF790Q6PG37 636 aa10.3□□□□□ -0.76
TTC9C-202ENST00000316461 VSIG10Q8N0Z9 540 aa10.3□□□□□ -0.76
TTC9C-202ENST00000316461 NGEFQ8N5V2 710 aa10.3□□□□□ -0.76
TTC9C-202ENST00000316461 ZNF496Q96IT1 587 aaPredicted RBP10.3□□□□□ -0.76
TTC9C-202ENST00000316461 SETDB2Q96T68 719 aa10.3□□□□□ -0.76
TTC9C-202ENST00000316461 BRCA1P38398 1863 aaKnown RBP10.3□□□□□ -0.76
TTC9C-202ENST00000316461 POTECB2RU33 542 aa10.29□□□□□ -0.76
TTC9C-202ENST00000316461 PDE6BP35913 854 aa10.29□□□□□ -0.76
TTC9C-202ENST00000316461 ST5P78524 1137 aa10.29□□□□□ -0.76
TTC9C-202ENST00000316461 TBC1D9BQ66K14 1250 aa10.29□□□□□ -0.76
TTC9C-202ENST00000316461 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
TTC9C-202ENST00000316461 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
TTC9C-202ENST00000316461 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
TTC9C-202ENST00000316461 C4AP0C0L4 1744 aa10.28□□□□□ -0.76
TTC9C-202ENST00000316461 C21orf2O43822 256 aa10.28□□□□□ -0.76
TTC9C-202ENST00000316461 VEGFAP15692 232 aaPredicted RBP10.28□□□□□ -0.76
TTC9C-202ENST00000316461 MCM10Q7L590 875 aa10.28□□□□□ -0.76
TTC9C-202ENST00000316461 DZIP3Q86Y13 1208 aaKnown RBP10.28□□□□□ -0.76
TTC9C-202ENST00000316461 KCNQ3O43525 872 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 POTEIP0CG38 1075 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 POTEJP0CG39 1038 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 LMNB1P20700 586 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 LBX1P52954 281 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 EIF5P55010 431 aaKnown RBP10.27□□□□□ -0.77
TTC9C-202ENST00000316461 DCTN1Q14203 1278 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
TTC9C-202ENST00000316461 CNBD1Q8NA66 436 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 PHACTR3Q96KR7 559 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 SBF1O95248 1867 aa10.27□□□□□ -0.77
TTC9C-202ENST00000316461 HEG1Q9ULI3 1381 aa10.26□□□□□ -0.77
TTC9C-202ENST00000316461 ARFGEF1Q9Y6D6 1849 aa10.26□□□□□ -0.77
TTC9C-202ENST00000316461 COL3A1P02461 1466 aaPredicted RBP10.26□□□□□ -0.77
TTC9C-202ENST00000316461 GLTPD2A6NH11 291 aa10.26□□□□□ -0.77
TTC9C-202ENST00000316461 IL6STP40189 918 aaPredicted RBP10.26□□□□□ -0.77
TTC9C-202ENST00000316461 ERFEQ4G0M1 354 aa10.26□□□□□ -0.77
TTC9C-202ENST00000316461 ABHD8Q96I13 439 aa10.26□□□□□ -0.77
TTC9C-202ENST00000316461 BCL2L12Q9HB09 334 aa10.26□□□□□ -0.77
TTC9C-202ENST00000316461 BRIP1Q9BX63 1249 aa10.25□□□□□ -0.77
TTC9C-202ENST00000316461 PRDM10Q9NQV6 1147 aa10.25□□□□□ -0.77
TTC9C-202ENST00000316461 MIS18AQ9NYP9 233 aa10.25□□□□□ -0.77
TTC9C-202ENST00000316461 ZNF652Q9Y2D9 606 aa10.25□□□□□ -0.77
TTC9C-202ENST00000316461 USP16Q9Y5T5 823 aa10.25□□□□□ -0.77
TTC9C-202ENST00000316461 PRAMEF22A3QJZ6 481 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms