RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 FKBP4Q02790 459 aaKnown RBP eCLIP21.49■■□□□ 1.038e-6■■■□□ 17.9
SLC12A4-201ENST00000316341 DNAAF4Q8WXU2 420 aa21.49■■□□□ 1.03
SLC12A4-201ENST00000316341 UBXN4Q92575 508 aa21.49■■□□□ 1.03
SLC12A4-201ENST00000316341 ADAMTS12P58397 1594 aa21.49■■□□□ 1.03
SLC12A4-201ENST00000316341 PI4KAP2A4QPH2 592 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 FOXO3O43524 673 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 PI4KAP1Q8N8J0 262 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 BIN1O00499 593 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 GSPT1P15170 499 aaKnown RBP21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 CCT2P78371 535 aaKnown RBP21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 KIF18AQ8NI77 898 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 FANCAO15360 1455 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 GADD45BO75293 160 aaPredicted RBP21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 DACT1Q9NYF0 836 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 F13A1P00488 732 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 SFPQP23246 707 aaKnown RBP eCLIP21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 ANO6Q4KMQ2 910 aa21.48■■□□□ 1.03
SLC12A4-201ENST00000316341 AK2P54819 239 aa21.47■■□□□ 1.03
SLC12A4-201ENST00000316341 ESCO1Q5FWF5 840 aa21.47■■□□□ 1.03
SLC12A4-201ENST00000316341 ANKRD20A12PQ8NF67 263 aa21.47■■□□□ 1.03
SLC12A4-201ENST00000316341 ECHDC1Q9NTX5 307 aa21.47■■□□□ 1.03
SLC12A4-201ENST00000316341 RRP12Q5JTH9 1297 aaKnown RBP21.47■■□□□ 1.03
SLC12A4-201ENST00000316341 PLCH2O75038 1416 aa21.47■■□□□ 1.03
SLC12A4-201ENST00000316341 CFAP100Q494V2 611 aa21.47■■□□□ 1.03
SLC12A4-201ENST00000316341 G2E3Q7L622 706 aa21.47■■□□□ 1.03
SLC12A4-201ENST00000316341 CHMLP26374 656 aa21.46■■□□□ 1.03
SLC12A4-201ENST00000316341 PTGS1P23219 599 aa21.46■■□□□ 1.03
SLC12A4-201ENST00000316341 KRT32Q14532 448 aa21.46■■□□□ 1.03
SLC12A4-201ENST00000316341 NCKAP5LQ9HCH0 1330 aa21.46■■□□□ 1.03
SLC12A4-201ENST00000316341 DHX16O60231 1041 aaKnown RBP21.45■■□□□ 1.03
SLC12A4-201ENST00000316341 ANAPC15P60006 121 aa21.45■■□□□ 1.03
SLC12A4-201ENST00000316341 CCDC85AQ96PX6 553 aaPredicted RBP21.45■■□□□ 1.03
SLC12A4-201ENST00000316341 TMX1Q9H3N1 280 aa21.45■■□□□ 1.03
SLC12A4-201ENST00000316341 DDX19AQ9NUU7 478 aaKnown RBP21.45■■□□□ 1.03
SLC12A4-201ENST00000316341 LRRC2Q9BYS8 371 aa21.45■■□□□ 1.02
SLC12A4-201ENST00000316341 ISM2Q6H9L7 571 aa21.45■■□□□ 1.02
SLC12A4-201ENST00000316341 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
SLC12A4-201ENST00000316341 POLR3GO15318 223 aaPredicted RBP21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 URI1O94763 535 aaPredicted RBP21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 SYT1P21579 422 aa21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 FAM200AQ8TCP9 573 aa21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 DNAJC25Q9H1X3 360 aa21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 MSH6P52701 1360 aa21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 ERICH2A1L162 156 aa21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 CCDC94Q9BW85 323 aaPredicted RBP21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 ANO10Q9NW15 660 aa21.44■■□□□ 1.02
SLC12A4-201ENST00000316341 EIF4A2Q14240 407 aaKnown RBP21.43■■□□□ 1.02
SLC12A4-201ENST00000316341 FSIP1Q8NA03 581 aa21.43■■□□□ 1.02
SLC12A4-201ENST00000316341 ATP8B2P98198 1209 aa21.43■■□□□ 1.02
SLC12A4-201ENST00000316341 FAM173BQ6P4H8 233 aa21.43■■□□□ 1.02
SLC12A4-201ENST00000316341 PTPRTO14522 1441 aa21.43■■□□□ 1.02
SLC12A4-201ENST00000316341 LUZP1Q86V48 1076 aa21.43■■□□□ 1.02
SLC12A4-201ENST00000316341 JARID2Q92833 1246 aaPredicted RBP21.43■■□□□ 1.02
SLC12A4-201ENST00000316341 CCP110O43303 1012 aa21.42■■□□□ 1.02
SLC12A4-201ENST00000316341 CCDC70Q6NSX1 233 aa21.42■■□□□ 1.02
SLC12A4-201ENST00000316341 CEP135Q66GS9 1140 aa21.42■■□□□ 1.02
SLC12A4-201ENST00000316341 CLSTN1O94985 981 aa21.41■■□□□ 1.02
SLC12A4-201ENST00000316341 ERBB4Q15303 1308 aa21.41■■□□□ 1.02
SLC12A4-201ENST00000316341 GTF2E1P29083 439 aaPredicted RBP21.41■■□□□ 1.02
SLC12A4-201ENST00000316341 PPP1R9BQ96SB3 815 aa21.41■■□□□ 1.02
SLC12A4-201ENST00000316341 MBD5Q9P267 1494 aa21.41■■□□□ 1.02
SLC12A4-201ENST00000316341 TMCO3Q6UWJ1 677 aa21.41■■□□□ 1.02
SLC12A4-201ENST00000316341 GPT2Q8TD30 523 aa21.41■■□□□ 1.02
SLC12A4-201ENST00000316341 RAB11FIP4Q86YS3 637 aa21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 RBM8AQ9Y5S9 174 aaKnown RBP21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 TYRO3Q06418 890 aa21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 JMYQ8N9B5 988 aa21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 EVI5LQ96CN4 794 aa21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 WDR7Q9Y4E6 1490 aa21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 TMC6Q7Z403 805 aa21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 INTS4Q96HW7 963 aaKnown RBP21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 MTMR7Q9Y216 660 aa21.4■■□□□ 1.02
SLC12A4-201ENST00000316341 SYTL4Q96C24 671 aaPredicted RBP21.39■■□□□ 1.02
SLC12A4-201ENST00000316341 PA2G4Q9UQ80 394 aaKnown RBP21.39■■□□□ 1.02
SLC12A4-201ENST00000316341 MARCH6O60337 910 aa21.39■■□□□ 1.01
SLC12A4-201ENST00000316341 CCAR1Q8IX12 1150 aaKnown RBP21.39■■□□□ 1.01
SLC12A4-201ENST00000316341 TTC39AQ5SRH9 613 aa21.39■■□□□ 1.01
SLC12A4-201ENST00000316341 CWC15Q9P013 229 aaKnown RBP21.39■■□□□ 1.01
SLC12A4-201ENST00000316341 CD109Q6YHK3 1445 aa21.38■■□□□ 1.01
SLC12A4-201ENST00000316341 SKILP12757 684 aa21.38■■□□□ 1.01
SLC12A4-201ENST00000316341 MAP3K2Q9Y2U5 619 aa21.38■■□□□ 1.01
SLC12A4-201ENST00000316341 CAGE1Q8TC20 777 aa21.38■■□□□ 1.01
SLC12A4-201ENST00000316341 ACEP12821 1306 aa21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 PDIA4P13667 645 aaKnown RBP21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 MTHFSDQ2M296 383 aaKnown RBP21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 POLR3DP05423 398 aaPredicted RBP21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 BRF1Q92994 677 aa21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 ZBTB9Q96C00 473 aa21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 CCDC158Q5M9N0 1113 aa21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 LEKR1Q6ZMV7 388 aa21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 ACBD3Q9H3P7 528 aa21.37■■□□□ 1.01
SLC12A4-201ENST00000316341 NAP1L1P55209 391 aaKnown RBP21.36■■□□□ 1.01
SLC12A4-201ENST00000316341 MYD88Q99836 296 aa21.36■■□□□ 1.01
SLC12A4-201ENST00000316341 RBM33Q96EV2 1170 aaKnown RBP21.36■■□□□ 1.01
SLC12A4-201ENST00000316341 ABCC10Q5T3U5 1492 aa21.36■■□□□ 1.01
SLC12A4-201ENST00000316341 GTF2F1P35269 517 aaKnown RBP eCLIP21.36■■□□□ 1.01
SLC12A4-201ENST00000316341 CHPF2Q9P2E5 772 aa21.36■■□□□ 1.01
SLC12A4-201ENST00000316341 PPFIBP1Q86W92 1011 aa21.36■■□□□ 1.01
SLC12A4-201ENST00000316341 PALD1Q9ULE6 856 aa21.35■■□□□ 1.01
SLC12A4-201ENST00000316341 ABCA5Q8WWZ7 1642 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms