RNA–Protein interactions for RNA: ENST00000314616.10

SUPT6H-201, Transcript of SPT6 homolog, histone chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT6H, Length 6,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-201ENST00000314616 PHF8Q9UPP1 1060 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 RRP1P56182 461 aaKnown RBP9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 PDE3BQ13370 1112 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 HSP90AB4PQ58FF6 505 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 CCDC181Q5TID7 509 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 FAM114A2Q9NRY5 505 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.923e-9■■■■■ 32.5
SUPT6H-201ENST00000314616 KDM6BO15054 1643 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 KIF20AO95235 890 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 KRT222Q8N1A0 295 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 ZNF219Q9P2Y4 722 aaPredicted RBP9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 SWAP70Q9UH65 585 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 ATAD2Q6PL18 1390 aa9.33□□□□□ -0.92
SUPT6H-201ENST00000314616 XRCC6P12956 609 aaKnown RBP eCLIP9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 ZNHIT6Q9NWK9 470 aaKnown RBP9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 DBN1Q16643 649 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 WDR66Q8TBY9 1149 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 C9orf78Q9NZ63 289 aaPredicted RBP9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 SMC2O95347 1197 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 FKBP5Q13451 457 aaPredicted RBP9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 WASHC4Q2M389 1173 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 NEUROD6Q96NK8 337 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 BRD4O60885 1362 aaPredicted RBP9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 ATP10AO60312 1499 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 RAI14Q9P0K7 980 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 SAMD9LQ8IVG5 1584 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 SCAF11Q99590 1463 aaKnown RBP9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 ACEP12821 1306 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 CHRNA2Q15822 529 aa9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 PNISRQ8TF01 805 aaKnown RBP9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
SUPT6H-201ENST00000314616 HOOK1Q9UJC3 728 aaKnown RBP9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 COMMD10Q9Y6G5 202 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 CABLES1Q8TDN4 633 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 SYCE3A1L190 88 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 TPD52L2O43399 206 aaKnown RBP9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 KCNA6P17658 529 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 EXOSC9Q06265 439 aaKnown RBP9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 ZKSCAN2Q63HK3 967 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 GIGYF2Q6Y7W6 1299 aaKnown RBP9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 TCHPQ9BT92 498 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 SHANK2Q9UPX8 1470 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 GOLGA6L7A0A1B0GV03 622 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 ISM2Q6H9L7 571 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 TPX2Q9ULW0 747 aaKnown RBP9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 TXLNBQ8N3L3 684 aa9.31□□□□□ -0.92
SUPT6H-201ENST00000314616 SAFBQ15424 915 aaKnown RBP eCLIP9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 CDK5RAP3Q96JB5 506 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 ZMAT2Q96NC0 199 aaKnown RBP9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 ZSWIM4Q9H7M6 989 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 BCAR3O75815 825 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 DMTNQ08495 405 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 MCM10Q7L590 875 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 KIAA1328Q86T90 577 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 PRAG1Q86YV5 1406 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 ANKRD18AQ8IVF6 992 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 ZNF853P0CG23 659 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 GRIPAP1Q4V328 841 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 RNF168Q8IYW5 571 aaPredicted RBP9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 ERCC4Q92889 916 aaPredicted RBP9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 MBD5Q9P267 1494 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 ARMC9Q7Z3E5 817 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 RPUSD2Q8IZ73 545 aaKnown RBP9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 UBXN4Q92575 508 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 DDX17Q92841 729 aaKnown RBP9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 MYO5CQ9NQX4 1742 aa9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 TTLL12Q14166 644 aaPredicted RBP9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 ZNF530Q6P9A1 599 aaPredicted RBP9.3□□□□□ -0.92
SUPT6H-201ENST00000314616 GOLGA6L9A6NEM1 432 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 RANBP1P43487 201 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 PSMD2Q13200 908 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 KRT28Q7Z3Y7 464 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 EIF3JO75822 258 aaKnown RBP9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 IFIT2P09913 472 aaKnown RBP9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 FAM114A1Q8IWE2 563 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 ATP6V1DQ9Y5K8 247 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 PHACTR2O75167 634 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 WDR63Q8IWG1 891 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 ARHGEF12Q9NZN5 1544 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 MCM4P33991 863 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 DDX23Q9BUQ8 820 aaKnown RBP9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 TANGO6Q9C0B7 1094 aa9.29□□□□□ -0.92
SUPT6H-201ENST00000314616 ZKSCAN1P17029 563 aaPredicted RBP9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 GNAI1P63096 354 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 CAPN2P17655 700 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 SEPT6Q14141 434 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 FILIP1Q7Z7B0 1213 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 C1orf115Q9H7X2 142 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 TRMT1LQ7Z2T5 733 aaKnown RBP9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 CEP63Q96MT8 703 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 ATP6V1AP38606 617 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 ZFYVE16Q7Z3T8 1539 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 TATP17735 454 aaPredicted RBP9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 IGBP1P78318 339 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 WHAMMQ8TF30 809 aa9.28□□□□□ -0.92
SUPT6H-201ENST00000314616 UGGT1Q9NYU2 1555 aa9.27□□□□□ -0.92
SUPT6H-201ENST00000314616 CTR9Q6PD62 1173 aa9.27□□□□□ -0.92
SUPT6H-201ENST00000314616 BICDL1Q6ZP65 573 aa9.27□□□□□ -0.92
SUPT6H-201ENST00000314616 USH1CQ9Y6N9 552 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms