RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
CKS2-201ENST00000314355 GPBP1L1Q9HC44 474 aaPredicted RBP16.82■□□□□ 0.28
CKS2-201ENST00000314355 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
CKS2-201ENST00000314355 COL15A1P39059 1388 aa16.81■□□□□ 0.28
CKS2-201ENST00000314355 NPHP1O15259 732 aa16.81■□□□□ 0.28
CKS2-201ENST00000314355 TM4SF1P30408 202 aa16.81■□□□□ 0.28
CKS2-201ENST00000314355 RALBP1Q15311 655 aa16.81■□□□□ 0.28
CKS2-201ENST00000314355 MYH14Q7Z406 1995 aaKnown RBP16.8■□□□□ 0.28
CKS2-201ENST00000314355 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
CKS2-201ENST00000314355 SNRPA1P09661 255 aaKnown RBP16.8■□□□□ 0.28
CKS2-201ENST00000314355 IL6STP40189 918 aaPredicted RBP16.8■□□□□ 0.28
CKS2-201ENST00000314355 C1QTNF8P60827 252 aa16.8■□□□□ 0.28
CKS2-201ENST00000314355 DALRD3Q5D0E6 543 aaKnown RBP16.8■□□□□ 0.28
CKS2-201ENST00000314355 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
CKS2-201ENST00000314355 CICQ96RK0 1608 aaPredicted RBP16.8■□□□□ 0.28
CKS2-201ENST00000314355 POLRMTO00411 1230 aaKnown RBP16.79■□□□□ 0.28
CKS2-201ENST00000314355 SERPINB2P05120 415 aa16.79■□□□□ 0.28
CKS2-201ENST00000314355 EIF5P55010 431 aaKnown RBP16.79■□□□□ 0.28
CKS2-201ENST00000314355 TAF7Q15545 349 aaPredicted RBP16.79■□□□□ 0.28
CKS2-201ENST00000314355 MCM10Q7L590 875 aa16.79■□□□□ 0.28
CKS2-201ENST00000314355 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
CKS2-201ENST00000314355 NFIXQ14938 502 aa16.78■□□□□ 0.28
CKS2-201ENST00000314355 BICDL1Q6ZP65 573 aa16.78■□□□□ 0.28
CKS2-201ENST00000314355 C10orf71Q711Q0 1435 aa16.78■□□□□ 0.28
CKS2-201ENST00000314355 DDR1Q08345 913 aa16.77■□□□□ 0.28
CKS2-201ENST00000314355 DDX10Q13206 875 aaKnown RBP16.77■□□□□ 0.28
CKS2-201ENST00000314355 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
CKS2-201ENST00000314355 C4AP0C0L4 1744 aa16.76■□□□□ 0.27
CKS2-201ENST00000314355 TJP1Q07157 1748 aa16.76■□□□□ 0.27
CKS2-201ENST00000314355 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
CKS2-201ENST00000314355 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
CKS2-201ENST00000314355 A1BGP04217 495 aa16.76■□□□□ 0.27
CKS2-201ENST00000314355 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
CKS2-201ENST00000314355 H0YIN7 160 aa16.75■□□□□ 0.27
CKS2-201ENST00000314355 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
CKS2-201ENST00000314355 SETDB2Q96T68 719 aa16.75■□□□□ 0.27
CKS2-201ENST00000314355 PDZRN3Q9UPQ7 1066 aa16.75■□□□□ 0.27
CKS2-201ENST00000314355 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
CKS2-201ENST00000314355 SENP3-EIF4A1A0A087X0R7 540 aa16.74■□□□□ 0.27
CKS2-201ENST00000314355 KCNQ3O43525 872 aa16.74■□□□□ 0.27
CKS2-201ENST00000314355 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
CKS2-201ENST00000314355 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
CKS2-201ENST00000314355 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
CKS2-201ENST00000314355 VIRMAQ69YN4 1812 aaKnown RBP16.74■□□□□ 0.27
CKS2-201ENST00000314355 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
CKS2-201ENST00000314355 KCNA3P22001 575 aa16.73■□□□□ 0.27
CKS2-201ENST00000314355 CHRNA5P30532 468 aa16.73■□□□□ 0.27
CKS2-201ENST00000314355 NFE2L2Q16236 605 aa16.73■□□□□ 0.27
CKS2-201ENST00000314355 UTRNP46939 3433 aa16.72■□□□□ 0.27
CKS2-201ENST00000314355 PDE6BP35913 854 aa16.72■□□□□ 0.27
CKS2-201ENST00000314355 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
CKS2-201ENST00000314355 ST5P78524 1137 aa16.71■□□□□ 0.27
CKS2-201ENST00000314355 TBC1D9BQ66K14 1250 aa16.71■□□□□ 0.27
CKS2-201ENST00000314355 C2CD5Q86YS7 1000 aa16.71■□□□□ 0.27
CKS2-201ENST00000314355 TTLL6Q8N841 843 aa16.71■□□□□ 0.27
CKS2-201ENST00000314355 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
CKS2-201ENST00000314355 WDR43Q15061 677 aaKnown RBP eCLIP16.7■□□□□ 0.26
CKS2-201ENST00000314355 CLEC4GQ6UXB4 293 aa16.7■□□□□ 0.26
CKS2-201ENST00000314355 MIS18AQ9NYP9 233 aa16.7■□□□□ 0.26
CKS2-201ENST00000314355 KIF13BQ9NQT8 1826 aa16.7■□□□□ 0.26
CKS2-201ENST00000314355 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
CKS2-201ENST00000314355 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
CKS2-201ENST00000314355 RIPK4P57078 832 aa16.69■□□□□ 0.26
CKS2-201ENST00000314355 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
CKS2-201ENST00000314355 CNBD1Q8NA66 436 aa16.69■□□□□ 0.26
CKS2-201ENST00000314355 ZNF622Q969S3 477 aaKnown RBP eCLIP16.69■□□□□ 0.26
CKS2-201ENST00000314355 PLEKHF1Q96S99 279 aa16.69■□□□□ 0.26
CKS2-201ENST00000314355 BRIP1Q9BX63 1249 aa16.69■□□□□ 0.26
CKS2-201ENST00000314355 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
CKS2-201ENST00000314355 GTF2E1P29083 439 aaPredicted RBP16.68■□□□□ 0.26
CKS2-201ENST00000314355 UBR2Q8IWV8 1755 aa16.68■□□□□ 0.26
CKS2-201ENST00000314355 CAMTA2O94983 1202 aa16.67■□□□□ 0.26
CKS2-201ENST00000314355 TPTE2Q6XPS3 522 aa16.67■□□□□ 0.26
CKS2-201ENST00000314355 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
CKS2-201ENST00000314355 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
CKS2-201ENST00000314355 RNF181Q9P0P0 153 aa16.67■□□□□ 0.26
CKS2-201ENST00000314355 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
CKS2-201ENST00000314355 PIP4K2AP48426 406 aaPredicted RBP16.66■□□□□ 0.26
CKS2-201ENST00000314355 KDM2BQ8NHM5 1336 aa16.66■□□□□ 0.26
CKS2-201ENST00000314355 ADCY9O60503 1353 aa16.65■□□□□ 0.26
CKS2-201ENST00000314355 RGL2O15211 777 aa16.65■□□□□ 0.26
CKS2-201ENST00000314355 PRR5LQ6MZQ0 368 aa16.65■□□□□ 0.26
CKS2-201ENST00000314355 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
CKS2-201ENST00000314355 CNKSR1Q969H4 720 aa16.65■□□□□ 0.26
CKS2-201ENST00000314355 TSPYL4Q9UJ04 414 aa16.65■□□□□ 0.26
CKS2-201ENST00000314355 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
CKS2-201ENST00000314355 ZEB1P37275 1124 aaPredicted RBP16.64■□□□□ 0.25
CKS2-201ENST00000314355 EIF4A1P60842 406 aaKnown RBP16.64■□□□□ 0.25
CKS2-201ENST00000314355 KIF6Q6ZMV9 814 aa16.64■□□□□ 0.25
CKS2-201ENST00000314355 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
CKS2-201ENST00000314355 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
CKS2-201ENST00000314355 SIPA1L3O60292 1781 aaPredicted RBP16.64■□□□□ 0.25
CKS2-201ENST00000314355 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
CKS2-201ENST00000314355 GOLGB1Q14789 3259 aaKnown RBP16.62■□□□□ 0.25
CKS2-201ENST00000314355 TOMM70O94826 608 aa16.62■□□□□ 0.25
CKS2-201ENST00000314355 LMNB1P20700 586 aa16.62■□□□□ 0.25
CKS2-201ENST00000314355 SOGA3Q5TF21 947 aa16.62■□□□□ 0.25
CKS2-201ENST00000314355 CCDC24Q8N4L8 307 aa16.62■□□□□ 0.25
CKS2-201ENST00000314355 MASTLQ96GX5 879 aa16.62■□□□□ 0.25
CKS2-201ENST00000314355 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms