RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 ERICH2A1L162 156 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 GOLGA6L19H0YKK7 550 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 TMX3Q96JJ7 454 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 TRMT112Q9UI30 125 aaKnown RBP7.39□□□□□ -1.23
PRKDC-201ENST00000314191 CHAF1AQ13111 956 aaPredicted RBP7.39□□□□□ -1.23
PRKDC-201ENST00000314191 MPNDQ8N594 471 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 NBPF7P0C2Y1 421 aaPredicted RBP7.39□□□□□ -1.23
PRKDC-201ENST00000314191 MBD3O95983 291 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 SASS6Q6UVJ0 657 aa7.39□□□□□ -1.23
PRKDC-201ENST00000314191 GRM8O00222 908 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 ATP2B1P20020 1258 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 ALDH1L1O75891 902 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 TPM4P67936 248 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 EIF4A1P60842 406 aaKnown RBP7.38□□□□□ -1.23
PRKDC-201ENST00000314191 METTL24Q5JXM2 366 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 MTMR7Q9Y216 660 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 CREBRFQ8IUR6 639 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 GRPEL1Q9HAV7 217 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 ZSCAN31Q96LW9 406 aaPredicted RBP7.38□□□□□ -1.23
PRKDC-201ENST00000314191 GOLIM4O00461 696 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 GDPD2Q9HCC8 539 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 DDX11Q96FC9 970 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 MPHOSPH8Q99549 860 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 EVI5LQ96CN4 794 aa7.38□□□□□ -1.23
PRKDC-201ENST00000314191 TCEANC2Q96MN5 208 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 CDK11BP21127 795 aaKnown RBP7.37□□□□□ -1.23
PRKDC-201ENST00000314191 KLHDC4Q8TBB5 520 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 PREX2Q70Z35 1606 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 PDCP20941 246 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 ANKRD1Q15327 319 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 DDX46Q7L014 1031 aaKnown RBP7.37□□□□□ -1.23
PRKDC-201ENST00000314191 AATKQ6ZMQ8 1374 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 ABCC3O15438 1527 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 RAD21O60216 631 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 PPFIA3O75145 1194 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 LDHAL6AQ6ZMR3 332 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 CCDC73Q6ZRK6 1079 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 DDX21Q9NR30 783 aaKnown RBP eCLIP7.37□□□□□ -1.23
PRKDC-201ENST00000314191 ARHGAP31Q2M1Z3 1444 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 ZNF790Q6PG37 636 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 ZNF853P0CG23 659 aa7.37□□□□□ -1.23
PRKDC-201ENST00000314191 DCAF5Q96JK2 942 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 TSPY26PQ9H489 355 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 PLEKHG1Q9ULL1 1385 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 A1BGP04217 495 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 CHMLP26374 656 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 IFIT5Q13325 482 aaKnown RBP7.36□□□□□ -1.23
PRKDC-201ENST00000314191 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.36□□□□□ -1.237e-7■■■□□ 19.1
PRKDC-201ENST00000314191 ABCF2Q9UG63 623 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 ABCC4O15439 1325 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 SDF4Q9BRK5 362 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 ZCCHC11Q5TAX3 1644 aaKnown RBP7.36□□□□□ -1.23
PRKDC-201ENST00000314191 BAG4O95429 457 aaKnown RBP7.36□□□□□ -1.23
PRKDC-201ENST00000314191 PHF23Q9BUL5 403 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-201ENST00000314191 KRT85P78386 507 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 CWC25Q9NXE8 425 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-201ENST00000314191 ZNF496Q96IT1 587 aaPredicted RBP7.36□□□□□ -1.23
PRKDC-201ENST00000314191 ZGPATQ8N5A5 531 aaKnown RBP7.36□□□□□ -1.23
PRKDC-201ENST00000314191 KRT32Q14532 448 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 AKAP2Q9Y2D5 859 aa7.36□□□□□ -1.23
PRKDC-201ENST00000314191 ACSBG1Q96GR2 724 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 SNX21Q969T3 373 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 NOL10Q9BSC4 688 aaKnown RBP7.35□□□□□ -1.23
PRKDC-201ENST00000314191 USP26Q9BXU7 913 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 AMOTL1Q8IY63 956 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 LIMCH1Q9UPQ0 1083 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 DTNBO60941 627 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 CCDC34Q96HJ3 373 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 NECAB1Q8N987 351 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 FAM135BQ49AJ0 1406 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 USP44Q9H0E7 712 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 SOS1Q07889 1333 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-201ENST00000314191 NMIQ13287 307 aaPredicted RBP7.35□□□□□ -1.23
PRKDC-201ENST00000314191 STK38Q15208 465 aa7.35□□□□□ -1.23
PRKDC-201ENST00000314191 DHX16O60231 1041 aaKnown RBP7.35□□□□□ -1.23
PRKDC-201ENST00000314191 SYCE3A1L190 88 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 BABAM1Q9NWV8 329 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 KIAA0232Q92628 1395 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 GJB2P29033 226 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 RBM25P49756 843 aaKnown RBP7.34□□□□□ -1.23
PRKDC-201ENST00000314191 GUCY1B3Q02153 619 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 A2ML1A8K2U0 1454 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 SUCLG2Q96I99 432 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 RBM8AQ9Y5S9 174 aaKnown RBP7.34□□□□□ -1.23
PRKDC-201ENST00000314191 MARCH6O60337 910 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 IGSF1Q8N6C5 1336 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 TFCP2Q12800 502 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 FAM43AQ8N2R8 423 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 RAI14Q9P0K7 980 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 RTL1A6NKG5 1358 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 ANKRD18BA2A2Z9 1011 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 GSPT1P15170 499 aaKnown RBP7.34□□□□□ -1.23
PRKDC-201ENST00000314191 SAFBQ15424 915 aaKnown RBP eCLIP7.34□□□□□ -1.23
PRKDC-201ENST00000314191 ZSCAN25Q6NSZ9 544 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 ARAP3Q8WWN8 1544 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 LRP2BPQ9P2M1 347 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 U3KPZ7 1027 aaPredicted RBP7.34□□□□□ -1.23
PRKDC-201ENST00000314191 SPATA32Q96LK8 384 aa7.34□□□□□ -1.23
PRKDC-201ENST00000314191 LETM1O95202 739 aaPredicted RBP7.34□□□□□ -1.24
PRKDC-201ENST00000314191 ARHGEF25Q86VW2 580 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms