RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 CHMP4AQ9BY43 222 aa20.23■□□□□ 0.83
TUBA3E-201ENST00000312988 LAMB4A4D0S4 1761 aa20.23■□□□□ 0.83
TUBA3E-201ENST00000312988 ZNF831Q5JPB2 1677 aa20.23■□□□□ 0.83
TUBA3E-201ENST00000312988 CT47B1P0C2W7 299 aaPredicted RBP20.22■□□□□ 0.83
TUBA3E-201ENST00000312988 CRKLP46109 303 aaKnown RBP20.22■□□□□ 0.83
TUBA3E-201ENST00000312988 CCDC30Q5VVM6 783 aa20.22■□□□□ 0.83
TUBA3E-201ENST00000312988 CICQ96RK0 1608 aaPredicted RBP20.21■□□□□ 0.83
TUBA3E-201ENST00000312988 TCERG1O14776 1098 aaKnown RBP20.21■□□□□ 0.83
TUBA3E-201ENST00000312988 A1BGP04217 495 aa20.21■□□□□ 0.83
TUBA3E-201ENST00000312988 CCDC87Q9NVE4 849 aa20.21■□□□□ 0.83
TUBA3E-201ENST00000312988 AK7Q96M32 723 aa20.2■□□□□ 0.82
TUBA3E-201ENST00000312988 STK31Q9BXU1 1019 aa20.2■□□□□ 0.82
TUBA3E-201ENST00000312988 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
TUBA3E-201ENST00000312988 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
TUBA3E-201ENST00000312988 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
TUBA3E-201ENST00000312988 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
TUBA3E-201ENST00000312988 ZNF330Q9Y3S2 320 aaPredicted RBP20.19■□□□□ 0.82
TUBA3E-201ENST00000312988 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
TUBA3E-201ENST00000312988 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
TUBA3E-201ENST00000312988 ZBTB1Q9Y2K1 713 aa20.18■□□□□ 0.82
TUBA3E-201ENST00000312988 RREB1Q92766 1687 aa20.18■□□□□ 0.82
TUBA3E-201ENST00000312988 C4BP0C0L5 1744 aa20.18■□□□□ 0.82
TUBA3E-201ENST00000312988 GNPATO15228 680 aa20.17■□□□□ 0.82
TUBA3E-201ENST00000312988 MYL6BP14649 208 aa20.17■□□□□ 0.82
TUBA3E-201ENST00000312988 ZNF428Q96B54 188 aa20.17■□□□□ 0.82
TUBA3E-201ENST00000312988 DBF4Q9UBU7 674 aaPredicted RBP20.17■□□□□ 0.82
TUBA3E-201ENST00000312988 ERBB4Q15303 1308 aa20.17■□□□□ 0.82
TUBA3E-201ENST00000312988 RC3H1Q5TC82 1133 aaKnown RBP20.17■□□□□ 0.82
TUBA3E-201ENST00000312988 INTS5Q6P9B9 1019 aaKnown RBP20.17■□□□□ 0.82
TUBA3E-201ENST00000312988 NPM2Q86SE8 214 aaKnown RBP20.17■□□□□ 0.82
TUBA3E-201ENST00000312988 ANXA1P04083 346 aa20.16■□□□□ 0.82
TUBA3E-201ENST00000312988 BCL2L13Q9BXK5 485 aa20.16■□□□□ 0.82
TUBA3E-201ENST00000312988 DDX21Q9NR30 783 aaKnown RBP eCLIP20.16■□□□□ 0.82
TUBA3E-201ENST00000312988 STK32BQ9NY57 414 aa20.16■□□□□ 0.82
TUBA3E-201ENST00000312988 NUP188Q5SRE5 1749 aa20.15■□□□□ 0.82
TUBA3E-201ENST00000312988 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
TUBA3E-201ENST00000312988 MYH14Q7Z406 1995 aaKnown RBP20.14■□□□□ 0.82
TUBA3E-201ENST00000312988 NBPF26B4DH59 902 aa20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 PROSER3Q2NL68 480 aa20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 NBPF14Q5TI25 921 aa20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 NBPF10Q6P3W6 841 aaKnown RBP20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 NBPF15Q8N660 670 aa20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 SSH1Q8WYL5 1049 aa20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 RTCBQ9Y3I0 505 aaKnown RBP20.14■□□□□ 0.81
TUBA3E-201ENST00000312988 PDIA6Q15084 440 aa20.13■□□□□ 0.81
TUBA3E-201ENST00000312988 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
TUBA3E-201ENST00000312988 ALDH1L2Q3SY69 923 aa20.13■□□□□ 0.81
TUBA3E-201ENST00000312988 ARXQ96QS3 562 aa20.13■□□□□ 0.81
TUBA3E-201ENST00000312988 HYPKQ9NX55 129 aa20.13■□□□□ 0.81
TUBA3E-201ENST00000312988 RCAN3Q9UKA8 241 aa20.13■□□□□ 0.81
TUBA3E-201ENST00000312988 RPS6KA4O75676 772 aa20.12■□□□□ 0.81
TUBA3E-201ENST00000312988 PHF14O94880 888 aa20.12■□□□□ 0.81
TUBA3E-201ENST00000312988 IL6STP40189 918 aaPredicted RBP20.12■□□□□ 0.81
TUBA3E-201ENST00000312988 AKT1S1Q96B36 256 aa20.12■□□□□ 0.81
TUBA3E-201ENST00000312988 ANO8Q9HCE9 1232 aaPredicted RBP20.12■□□□□ 0.81
TUBA3E-201ENST00000312988 AIMP1Q12904 312 aaKnown RBP20.12■□□□□ 0.81
TUBA3E-201ENST00000312988 SMIM5Q71RC9 77 aa20.11■□□□□ 0.81
TUBA3E-201ENST00000312988 MRPL50Q8N5N7 158 aaKnown RBP20.11■□□□□ 0.81
TUBA3E-201ENST00000312988 SOCS7O14512 581 aa20.1■□□□□ 0.81
TUBA3E-201ENST00000312988 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
TUBA3E-201ENST00000312988 EIF5P55010 431 aaKnown RBP20.1■□□□□ 0.81
TUBA3E-201ENST00000312988 SLC15A2Q16348 729 aa20.1■□□□□ 0.81
TUBA3E-201ENST00000312988 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
TUBA3E-201ENST00000312988 COL15A1P39059 1388 aa20.09■□□□□ 0.81
TUBA3E-201ENST00000312988 A0A087WZG4 1122 aa20.09■□□□□ 0.81
TUBA3E-201ENST00000312988 TRAPPC3LQ5T215 181 aa20.09■□□□□ 0.81
TUBA3E-201ENST00000312988 PHAXQ9H814 394 aaKnown RBP20.09■□□□□ 0.81
TUBA3E-201ENST00000312988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.08■□□□□ 0.81
TUBA3E-201ENST00000312988 MSH5O43196 834 aa20.08■□□□□ 0.81
TUBA3E-201ENST00000312988 BCAR3O75815 825 aa20.08■□□□□ 0.81
TUBA3E-201ENST00000312988 SSFA2P28290 1259 aa20.08■□□□□ 0.81
TUBA3E-201ENST00000312988 COPS6Q7L5N1 327 aa20.08■□□□□ 0.81
TUBA3E-201ENST00000312988 CACNA1FO60840 1977 aa20.08■□□□□ 0.8
TUBA3E-201ENST00000312988 UBR3Q6ZT12 1888 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 FLIIQ13045 1269 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 KIF6Q6ZMV9 814 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 G2E3Q7L622 706 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 AMIGO3Q86WK7 504 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 DZIP3Q86Y13 1208 aaKnown RBP20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 ADRA2BP18089 450 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 RFC4P35249 363 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 LRP10Q7Z4F1 713 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 FLAD1Q8NFF5 587 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 TBC1D2BQ9UPU7 963 aa20.07■□□□□ 0.8
TUBA3E-201ENST00000312988 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
TUBA3E-201ENST00000312988 DDX58O95786 925 aaKnown RBP20.06■□□□□ 0.8
TUBA3E-201ENST00000312988 FKBP5Q13451 457 aaPredicted RBP20.06■□□□□ 0.8
TUBA3E-201ENST00000312988 TTLL7Q6ZT98 887 aa20.06■□□□□ 0.8
TUBA3E-201ENST00000312988 ARHGEF1Q92888 912 aaKnown RBP20.06■□□□□ 0.8
TUBA3E-201ENST00000312988 NOB1Q9ULX3 412 aaKnown RBP20.05■□□□□ 0.8
TUBA3E-201ENST00000312988 ZPR1O75312 459 aa20.04■□□□□ 0.8
TUBA3E-201ENST00000312988 TUBGCP6Q96RT7 1819 aa20.04■□□□□ 0.8
TUBA3E-201ENST00000312988 ZBTB3Q9H5J0 574 aa20.04■□□□□ 0.8
TUBA3E-201ENST00000312988 PNPLA7Q6ZV29 1317 aa20.03■□□□□ 0.8
TUBA3E-201ENST00000312988 RIC3Q7Z5B4 369 aa20.03■□□□□ 0.8
TUBA3E-201ENST00000312988 IPO8O15397 1037 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms