RNA–Protein interactions for RNA: ENST00000312377.9

RACGAP1-201, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-201ENST00000312377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.36□□□□□ -0.43
RACGAP1-201ENST00000312377 RFC4P35249 363 aa12.36□□□□□ -0.43
RACGAP1-201ENST00000312377 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
RACGAP1-201ENST00000312377 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
RACGAP1-201ENST00000312377 C20orf194Q5TEA3 1177 aa12.35□□□□□ -0.43
RACGAP1-201ENST00000312377 AMIGO3Q86WK7 504 aa12.35□□□□□ -0.43
RACGAP1-201ENST00000312377 ITPRIPQ8IWB1 547 aa12.35□□□□□ -0.43
RACGAP1-201ENST00000312377 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
RACGAP1-201ENST00000312377 C1orf115Q9H7X2 142 aa12.35□□□□□ -0.43
RACGAP1-201ENST00000312377 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 ONECUT3O60422 494 aaPredicted RBP12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 PROM2Q8N271 834 aa12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 UPF1Q92900 1129 aaKnown RBP eCLIP12.34□□□□□ -0.434e-6■□□□□ 9.8
RACGAP1-201ENST00000312377 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 MARF1Q9Y4F3 1742 aaKnown RBP12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 ZPR1O75312 459 aa12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 VAMP4O75379 141 aa12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 CCDC30Q5VVM6 783 aa12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 ANO8Q9HCE9 1232 aaPredicted RBP12.34□□□□□ -0.43
RACGAP1-201ENST00000312377 SHPRHQ149N8 1683 aa12.33□□□□□ -0.43
RACGAP1-201ENST00000312377 TNS2Q63HR2 1409 aa12.33□□□□□ -0.44
RACGAP1-201ENST00000312377 GLI3P10071 1580 aa12.33□□□□□ -0.44
RACGAP1-201ENST00000312377 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
RACGAP1-201ENST00000312377 CWF19L2Q2TBE0 894 aaKnown RBP12.32□□□□□ -0.44
RACGAP1-201ENST00000312377 DZIP3Q86Y13 1208 aaKnown RBP12.32□□□□□ -0.44
RACGAP1-201ENST00000312377 MYD88Q99836 296 aa12.32□□□□□ -0.44
RACGAP1-201ENST00000312377 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 NUTM1Q86Y26 1132 aa12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 SYNE4Q8N205 404 aa12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 TRAPPC3LQ5T215 181 aa12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 NBPF14Q5TI25 921 aa12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
RACGAP1-201ENST00000312377 FLIIQ13045 1269 aa12.3□□□□□ -0.44
RACGAP1-201ENST00000312377 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
RACGAP1-201ENST00000312377 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
RACGAP1-201ENST00000312377 CCDC87Q9NVE4 849 aa12.3□□□□□ -0.44
RACGAP1-201ENST00000312377 MAP3K2Q9Y2U5 619 aa12.3□□□□□ -0.44
RACGAP1-201ENST00000312377 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
RACGAP1-201ENST00000312377 RARSP54136 660 aaKnown RBP12.3□□□□□ -0.44
RACGAP1-201ENST00000312377 COL18A1P39060 1754 aa12.3□□□□□ -0.44
RACGAP1-201ENST00000312377 KIF6Q6ZMV9 814 aa12.29□□□□□ -0.44
RACGAP1-201ENST00000312377 DBF4Q9UBU7 674 aaPredicted RBP12.29□□□□□ -0.44
RACGAP1-201ENST00000312377 HLFQ16534 295 aa12.29□□□□□ -0.44
RACGAP1-201ENST00000312377 ABCA3Q99758 1704 aa12.29□□□□□ -0.44
RACGAP1-201ENST00000312377 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
RACGAP1-201ENST00000312377 C9orf78Q9NZ63 289 aaPredicted RBP12.29□□□□□ -0.44
RACGAP1-201ENST00000312377 NIP7Q9Y221 180 aaKnown RBP eCLIP12.29□□□□□ -0.44
RACGAP1-201ENST00000312377 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
RACGAP1-201ENST00000312377 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
RACGAP1-201ENST00000312377 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
RACGAP1-201ENST00000312377 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
RACGAP1-201ENST00000312377 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
RACGAP1-201ENST00000312377 LMO7Q8WWI1 1683 aa12.28□□□□□ -0.44
RACGAP1-201ENST00000312377 FAM89AQ96GI7 184 aa12.28□□□□□ -0.44
RACGAP1-201ENST00000312377 ZNF853P0CG23 659 aa12.27□□□□□ -0.44
RACGAP1-201ENST00000312377 HEG1Q9ULI3 1381 aa12.27□□□□□ -0.44
RACGAP1-201ENST00000312377 BCL9O00512 1426 aa12.27□□□□□ -0.45
RACGAP1-201ENST00000312377 RLBP1P12271 317 aa12.26□□□□□ -0.45
RACGAP1-201ENST00000312377 ZNF521Q96K83 1311 aa12.26□□□□□ -0.45
RACGAP1-201ENST00000312377 COL22A1Q8NFW1 1626 aaPredicted RBP12.26□□□□□ -0.45
RACGAP1-201ENST00000312377 CEMIPQ8WUJ3 1361 aa12.26□□□□□ -0.45
RACGAP1-201ENST00000312377 HCLS1P14317 486 aaPredicted RBP12.26□□□□□ -0.45
RACGAP1-201ENST00000312377 NEXNQ0ZGT2 675 aa12.26□□□□□ -0.45
RACGAP1-201ENST00000312377 EXOC6Q8TAG9 804 aa12.26□□□□□ -0.45
RACGAP1-201ENST00000312377 UBE3BQ7Z3V4 1068 aa12.25□□□□□ -0.45
RACGAP1-201ENST00000312377 CRBNQ96SW2 442 aa12.25□□□□□ -0.45
RACGAP1-201ENST00000312377 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
RACGAP1-201ENST00000312377 TRIM27P14373 513 aa12.25□□□□□ -0.45
RACGAP1-201ENST00000312377 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
RACGAP1-201ENST00000312377 B4GALNT3Q6L9W6 998 aa12.25□□□□□ -0.45
RACGAP1-201ENST00000312377 COL23A1Q86Y22 540 aaPredicted RBP12.25□□□□□ -0.45
RACGAP1-201ENST00000312377 DDX58O95786 925 aaKnown RBP12.24□□□□□ -0.45
RACGAP1-201ENST00000312377 TMEM57Q8N5G2 664 aa12.24□□□□□ -0.45
RACGAP1-201ENST00000312377 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
RACGAP1-201ENST00000312377 INTS5Q6P9B9 1019 aaKnown RBP12.24□□□□□ -0.45
RACGAP1-201ENST00000312377 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.24□□□□□ -0.45
RACGAP1-201ENST00000312377 CAMKK2Q96RR4 588 aa12.24□□□□□ -0.45
RACGAP1-201ENST00000312377 SIL1Q9H173 461 aa12.24□□□□□ -0.45
RACGAP1-201ENST00000312377 A0A087WZG4 1122 aa12.23□□□□□ -0.45
RACGAP1-201ENST00000312377 MMP10P09238 476 aa12.23□□□□□ -0.45
RACGAP1-201ENST00000312377 SLC15A2Q16348 729 aa12.23□□□□□ -0.45
RACGAP1-201ENST00000312377 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
RACGAP1-201ENST00000312377 DZIP1LQ8IYY4 767 aaKnown RBP12.23□□□□□ -0.45
RACGAP1-201ENST00000312377 IPO8O15397 1037 aaKnown RBP12.23□□□□□ -0.45
RACGAP1-201ENST00000312377 SETDB2Q96T68 719 aa12.23□□□□□ -0.45
RACGAP1-201ENST00000312377 TEX13AQ9BXU3 409 aaPredicted RBP12.23□□□□□ -0.45
RACGAP1-201ENST00000312377 DNAAF4Q8WXU2 420 aa12.22□□□□□ -0.45
RACGAP1-201ENST00000312377 SKAP1Q86WV1 359 aa12.22□□□□□ -0.45
RACGAP1-201ENST00000312377 MRPL50Q8N5N7 158 aaKnown RBP12.22□□□□□ -0.45
RACGAP1-201ENST00000312377 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
RACGAP1-201ENST00000312377 CRYBG1Q9Y4K1 1723 aa12.22□□□□□ -0.45
RACGAP1-201ENST00000312377 RRP1P56182 461 aaKnown RBP12.22□□□□□ -0.45
RACGAP1-201ENST00000312377 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
RACGAP1-201ENST00000312377 TBC1D9BQ66K14 1250 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms