RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 LNPKQ9C0E8 428 aa19.01■□□□□ 0.63
RTP1-201ENST00000312295 PXDNLA1KZ92 1463 aa19.01■□□□□ 0.63
RTP1-201ENST00000312295 PAPPAQ13219 1627 aa19.01■□□□□ 0.63
RTP1-201ENST00000312295 SNRPA1P09661 255 aaKnown RBP19■□□□□ 0.63
RTP1-201ENST00000312295 SYTL4Q96C24 671 aaPredicted RBP19■□□□□ 0.63
RTP1-201ENST00000312295 TMOD3Q9NYL9 352 aa19■□□□□ 0.63
RTP1-201ENST00000312295 KCPQ6ZWJ8 1503 aa19■□□□□ 0.63
RTP1-201ENST00000312295 DNAAF4Q8WXU2 420 aa19■□□□□ 0.63
RTP1-201ENST00000312295 JCADQ9P266 1359 aa19■□□□□ 0.63
RTP1-201ENST00000312295 MAP3K2Q9Y2U5 619 aa19■□□□□ 0.63
RTP1-201ENST00000312295 UBR2Q8IWV8 1755 aa18.99■□□□□ 0.63
RTP1-201ENST00000312295 SLIT2O94813 1529 aa18.99■□□□□ 0.63
RTP1-201ENST00000312295 TNS2Q63HR2 1409 aa18.99■□□□□ 0.63
RTP1-201ENST00000312295 LRP6O75581 1613 aa18.99■□□□□ 0.63
RTP1-201ENST00000312295 APBB1O00213 710 aa18.98■□□□□ 0.63
RTP1-201ENST00000312295 EXOC5O00471 708 aa18.98■□□□□ 0.63
RTP1-201ENST00000312295 BACH2Q9BYV9 841 aa18.98■□□□□ 0.63
RTP1-201ENST00000312295 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.63
RTP1-201ENST00000312295 LAMB4A4D0S4 1761 aa18.98■□□□□ 0.63
RTP1-201ENST00000312295 NGLY1Q96IV0 654 aa18.98■□□□□ 0.63
RTP1-201ENST00000312295 KAT6BQ8WYB5 2073 aa18.98■□□□□ 0.63
RTP1-201ENST00000312295 NWD2Q9ULI1 1742 aa18.97■□□□□ 0.63
RTP1-201ENST00000312295 ANKRD45Q5TZF3 282 aa18.97■□□□□ 0.63
RTP1-201ENST00000312295 ANKRD44Q8N8A2 993 aa18.97■□□□□ 0.63
RTP1-201ENST00000312295 PIGBQ92521 554 aa18.97■□□□□ 0.63
RTP1-201ENST00000312295 SRCIN1Q9C0H9 1055 aa18.97■□□□□ 0.63
RTP1-201ENST00000312295 ASAP1Q9ULH1 1129 aa18.97■□□□□ 0.63
RTP1-201ENST00000312295 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
RTP1-201ENST00000312295 XAGE3Q8WTP9 111 aa18.97■□□□□ 0.63
RTP1-201ENST00000312295 HYPKQ9NX55 129 aa18.97■□□□□ 0.63
RTP1-201ENST00000312295 LRRFIP2Q9Y608 721 aaKnown RBP18.97■□□□□ 0.63
RTP1-201ENST00000312295 ITGB4P16144 1822 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 SPATA31A5Q5VU36 1347 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 SPATA31A7Q8IWB4 1347 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 DOT1LQ8TEK3 1739 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 CWF19L2Q2TBE0 894 aaKnown RBP18.96■□□□□ 0.63
RTP1-201ENST00000312295 C8orf34Q49A92 452 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 BEND3Q5T5X7 828 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 CHMP4AQ9BY43 222 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 USP44Q9H0E7 712 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 GNAI2P04899 355 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 NUCB1Q02818 461 aa18.96■□□□□ 0.63
RTP1-201ENST00000312295 HSPA1LP34931 641 aa18.95■□□□□ 0.62
RTP1-201ENST00000312295 DDB1Q16531 1140 aa18.95■□□□□ 0.62
RTP1-201ENST00000312295 CHD1LQ86WJ1 897 aa18.95■□□□□ 0.62
RTP1-201ENST00000312295 NBPF7P0C2Y1 421 aaPredicted RBP18.94■□□□□ 0.62
RTP1-201ENST00000312295 FAM98CQ17RN3 349 aaKnown RBP18.94■□□□□ 0.62
RTP1-201ENST00000312295 COPS6Q7L5N1 327 aa18.94■□□□□ 0.62
RTP1-201ENST00000312295 UBTFL1P0CB47 393 aaPredicted RBP18.94■□□□□ 0.62
RTP1-201ENST00000312295 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
RTP1-201ENST00000312295 KSR2Q6VAB6 950 aa18.94■□□□□ 0.62
RTP1-201ENST00000312295 GCC1Q96CN9 775 aa18.93■□□□□ 0.62
RTP1-201ENST00000312295 ACSBG1Q96GR2 724 aa18.93■□□□□ 0.62
RTP1-201ENST00000312295 PNMA6EA0A0J9YXQ4 647 aa18.93■□□□□ 0.62
RTP1-201ENST00000312295 A1BGP04217 495 aa18.93■□□□□ 0.62
RTP1-201ENST00000312295 GNAI3P08754 354 aa18.93■□□□□ 0.62
RTP1-201ENST00000312295 RIC3Q7Z5B4 369 aa18.93■□□□□ 0.62
RTP1-201ENST00000312295 UNC5CLQ8IV45 518 aa18.93■□□□□ 0.62
RTP1-201ENST00000312295 RBM42Q9BTD8 480 aaKnown RBP18.93■□□□□ 0.62
RTP1-201ENST00000312295 BCL9LQ86UU0 1499 aa18.93■□□□□ 0.62
RTP1-201ENST00000312295 LRP10Q7Z4F1 713 aa18.92■□□□□ 0.62
RTP1-201ENST00000312295 RPAP2Q8IXW5 612 aaPredicted RBP18.92■□□□□ 0.62
RTP1-201ENST00000312295 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
RTP1-201ENST00000312295 NBPF26B4DH59 902 aa18.92■□□□□ 0.62
RTP1-201ENST00000312295 NBPF14Q5TI25 921 aa18.92■□□□□ 0.62
RTP1-201ENST00000312295 NBPF10Q6P3W6 841 aaKnown RBP18.92■□□□□ 0.62
RTP1-201ENST00000312295 NBPF15Q8N660 670 aa18.92■□□□□ 0.62
RTP1-201ENST00000312295 SMARCA5O60264 1052 aaPredicted RBP18.91■□□□□ 0.62
RTP1-201ENST00000312295 DDX58O95786 925 aaKnown RBP18.91■□□□□ 0.62
RTP1-201ENST00000312295 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
RTP1-201ENST00000312295 ATG3Q9NT62 314 aa18.91■□□□□ 0.62
RTP1-201ENST00000312295 THRAP3Q9Y2W1 955 aaKnown RBP18.9■□□□□ 0.62
RTP1-201ENST00000312295 BCL9O00512 1426 aa18.9■□□□□ 0.62
RTP1-201ENST00000312295 MARCH10Q8NA82 808 aaPredicted RBP18.9■□□□□ 0.62
RTP1-201ENST00000312295 DCTPP1Q9H773 170 aa18.9■□□□□ 0.62
RTP1-201ENST00000312295 EXOC6BQ9Y2D4 811 aa18.9■□□□□ 0.62
RTP1-201ENST00000312295 MEX3CQ5U5Q3 659 aaKnown RBP18.89■□□□□ 0.61
RTP1-201ENST00000312295 MYD88Q99836 296 aa18.89■□□□□ 0.61
RTP1-201ENST00000312295 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
RTP1-201ENST00000312295 C9orf78Q9NZ63 289 aaPredicted RBP18.88■□□□□ 0.61
RTP1-201ENST00000312295 ARFGEF2Q9Y6D5 1785 aa18.88■□□□□ 0.61
RTP1-201ENST00000312295 IGKV5-2P06315 115 aa18.88■□□□□ 0.61
RTP1-201ENST00000312295 C16orf71Q8IYS4 520 aaPredicted RBP18.88■□□□□ 0.61
RTP1-201ENST00000312295 USP21Q9UK80 565 aa18.88■□□□□ 0.61
RTP1-201ENST00000312295 EP400Q96L91 3159 aa18.87■□□□□ 0.61
RTP1-201ENST00000312295 HMMRO75330 724 aa18.87■□□□□ 0.61
RTP1-201ENST00000312295 TTLL7Q6ZT98 887 aa18.87■□□□□ 0.61
RTP1-201ENST00000312295 OTUD7AQ8TE49 926 aaPredicted RBP18.87■□□□□ 0.61
RTP1-201ENST00000312295 JARID2Q92833 1246 aaPredicted RBP18.87■□□□□ 0.61
RTP1-201ENST00000312295 CDCA7Q9BWT1 371 aaPredicted RBP18.87■□□□□ 0.61
RTP1-201ENST00000312295 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.86■□□□□ 0.61
RTP1-201ENST00000312295 ATP5J2-PTCD1G3V325 749 aa18.86■□□□□ 0.61
RTP1-201ENST00000312295 ANKRD13DQ6ZTN6 518 aa18.86■□□□□ 0.61
RTP1-201ENST00000312295 SPATA31A6Q5VVP1 1343 aa18.86■□□□□ 0.61
RTP1-201ENST00000312295 SLC4A9Q96Q91 983 aa18.86■□□□□ 0.61
RTP1-201ENST00000312295 BARGINQ6ZT62 677 aa18.85■□□□□ 0.61
RTP1-201ENST00000312295 LINS1Q8NG48 757 aa18.85■□□□□ 0.61
RTP1-201ENST00000312295 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
RTP1-201ENST00000312295 SEC24BO95487 1268 aa18.85■□□□□ 0.61
RTP1-201ENST00000312295 VPS72Q15906 364 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms