RNA–Protein interactions for RNA: ENST00000311052.9

CARHSP1-201, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARHSP1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-201ENST00000311052 RUNDC1Q96C34 613 aa23.79■■□□□ 1.4
CARHSP1-201ENST00000311052 MMP10P09238 476 aa23.78■■□□□ 1.4
CARHSP1-201ENST00000311052 CD2APQ9Y5K6 639 aa23.78■■□□□ 1.4
CARHSP1-201ENST00000311052 USP42Q9H9J4 1324 aaKnown RBP23.78■■□□□ 1.4
CARHSP1-201ENST00000311052 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
CARHSP1-201ENST00000311052 CCDC146Q8IYE0 955 aa23.77■■□□□ 1.4
CARHSP1-201ENST00000311052 THUMPD2Q9BTF0 503 aaKnown RBP23.77■■□□□ 1.4
CARHSP1-201ENST00000311052 SRP68Q9UHB9 627 aaKnown RBP23.77■■□□□ 1.4
CARHSP1-201ENST00000311052 SNRPA1P09661 255 aaKnown RBP23.76■■□□□ 1.39
CARHSP1-201ENST00000311052 LMOD3Q0VAK6 560 aa23.76■■□□□ 1.39
CARHSP1-201ENST00000311052 MIS18AQ9NYP9 233 aa23.76■■□□□ 1.39
CARHSP1-201ENST00000311052 ZPR1O75312 459 aa23.75■■□□□ 1.39
CARHSP1-201ENST00000311052 NLGN2Q8NFZ4 835 aa23.75■■□□□ 1.39
CARHSP1-201ENST00000311052 ANP32CO43423 234 aa23.74■■□□□ 1.39
CARHSP1-201ENST00000311052 EIF5P55010 431 aaKnown RBP23.74■■□□□ 1.39
CARHSP1-201ENST00000311052 USP16Q9Y5T5 823 aa23.74■■□□□ 1.39
CARHSP1-201ENST00000311052 COL15A1P39059 1388 aa23.74■■□□□ 1.39
CARHSP1-201ENST00000311052 DLG5Q8TDM6 1919 aa23.73■■□□□ 1.39
CARHSP1-201ENST00000311052 USPL1Q5W0Q7 1092 aa23.73■■□□□ 1.39
CARHSP1-201ENST00000311052 NARFQ9UHQ1 456 aa23.73■■□□□ 1.39
CARHSP1-201ENST00000311052 A0A087WZG4 1122 aa23.72■■□□□ 1.39
CARHSP1-201ENST00000311052 FKBP8Q14318 412 aa23.72■■□□□ 1.39
CARHSP1-201ENST00000311052 RRP7AQ9Y3A4 280 aaKnown RBP23.72■■□□□ 1.39
CARHSP1-201ENST00000311052 PARP3Q9Y6F1 533 aa23.72■■□□□ 1.39
CARHSP1-201ENST00000311052 C4AP0C0L4 1744 aa23.71■■□□□ 1.39
CARHSP1-201ENST00000311052 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
CARHSP1-201ENST00000311052 A1BGP04217 495 aa23.71■■□□□ 1.39
CARHSP1-201ENST00000311052 IL6STP40189 918 aaPredicted RBP23.71■■□□□ 1.39
CARHSP1-201ENST00000311052 NEUROD2Q15784 382 aa23.71■■□□□ 1.39
CARHSP1-201ENST00000311052 GPR162Q16538 588 aa23.69■■□□□ 1.38
CARHSP1-201ENST00000311052 BABAM1Q9NWV8 329 aa23.69■■□□□ 1.38
CARHSP1-201ENST00000311052 TM4SF1P30408 202 aa23.68■■□□□ 1.38
CARHSP1-201ENST00000311052 EIF4A1P60842 406 aaKnown RBP23.68■■□□□ 1.38
CARHSP1-201ENST00000311052 CCDC184Q52MB2 194 aa23.68■■□□□ 1.38
CARHSP1-201ENST00000311052 NPM2Q86SE8 214 aaKnown RBP23.68■■□□□ 1.38
CARHSP1-201ENST00000311052 TSPYL4Q9UJ04 414 aa23.67■■□□□ 1.38
CARHSP1-201ENST00000311052 TRIM35Q9UPQ4 493 aa23.67■■□□□ 1.38
CARHSP1-201ENST00000311052 ZNF330Q9Y3S2 320 aaPredicted RBP23.67■■□□□ 1.38
CARHSP1-201ENST00000311052 GIGYF1O75420 1035 aaPredicted RBP23.66■■□□□ 1.38
CARHSP1-201ENST00000311052 BCL2L12Q9HB09 334 aa23.66■■□□□ 1.38
CARHSP1-201ENST00000311052 DDR1Q08345 913 aa23.65■■□□□ 1.38
CARHSP1-201ENST00000311052 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
CARHSP1-201ENST00000311052 POLRMTO00411 1230 aaKnown RBP23.64■■□□□ 1.37
CARHSP1-201ENST00000311052 TBC1D2BQ9UPU7 963 aa23.64■■□□□ 1.37
CARHSP1-201ENST00000311052 APAF1O14727 1248 aa23.63■■□□□ 1.37
CARHSP1-201ENST00000311052 TGFB2P61812 414 aa23.63■■□□□ 1.37
CARHSP1-201ENST00000311052 NFIXQ14938 502 aa23.63■■□□□ 1.37
CARHSP1-201ENST00000311052 KDM3BQ7LBC6 1761 aa23.63■■□□□ 1.37
CARHSP1-201ENST00000311052 C10orf71Q711Q0 1435 aa23.62■■□□□ 1.37
CARHSP1-201ENST00000311052 PIP4K2AP48426 406 aaPredicted RBP23.62■■□□□ 1.37
CARHSP1-201ENST00000311052 MRS2Q9HD23 443 aa23.62■■□□□ 1.37
CARHSP1-201ENST00000311052 NBPF26B4DH59 902 aa23.61■■□□□ 1.37
CARHSP1-201ENST00000311052 NBPF10Q6P3W6 841 aaKnown RBP23.61■■□□□ 1.37
CARHSP1-201ENST00000311052 DZIP3Q86Y13 1208 aaKnown RBP23.61■■□□□ 1.37
CARHSP1-201ENST00000311052 NBPF15Q8N660 670 aa23.61■■□□□ 1.37
CARHSP1-201ENST00000311052 CHL1O00533 1208 aa23.6■■□□□ 1.37
CARHSP1-201ENST00000311052 GRIN3BO60391 1043 aa23.6■■□□□ 1.37
CARHSP1-201ENST00000311052 YBX3P16989 372 aaKnown RBP eCLIP23.6■■□□□ 1.371e-7■□□□□ 10.8
CARHSP1-201ENST00000311052 CAMTA2O94983 1202 aa23.59■■□□□ 1.37
CARHSP1-201ENST00000311052 YY1P25490 414 aa23.59■■□□□ 1.37
CARHSP1-201ENST00000311052 SERPINB2P05120 415 aa23.57■■□□□ 1.36
CARHSP1-201ENST00000311052 TBC1D9BQ66K14 1250 aa23.57■■□□□ 1.36
CARHSP1-201ENST00000311052 BICDL1Q6ZP65 573 aa23.57■■□□□ 1.36
CARHSP1-201ENST00000311052 LAS1LQ9Y4W2 734 aaKnown RBP23.57■■□□□ 1.36
CARHSP1-201ENST00000311052 PXDNLA1KZ92 1463 aa23.56■■□□□ 1.36
CARHSP1-201ENST00000311052 A0A0G2JLW4 131 aa23.56■■□□□ 1.36
CARHSP1-201ENST00000311052 KIF13BQ9NQT8 1826 aa23.55■■□□□ 1.36
CARHSP1-201ENST00000311052 RGL2O15211 777 aa23.55■■□□□ 1.36
CARHSP1-201ENST00000311052 DPEP1P16444 411 aa23.55■■□□□ 1.36
CARHSP1-201ENST00000311052 CALD1Q05682 793 aaKnown RBP23.55■■□□□ 1.36
CARHSP1-201ENST00000311052 CLEC4GQ6UXB4 293 aa23.55■■□□□ 1.36
CARHSP1-201ENST00000311052 CFAP44Q96MT7 982 aa23.55■■□□□ 1.36
CARHSP1-201ENST00000311052 ERBB4Q15303 1308 aa23.55■■□□□ 1.36
CARHSP1-201ENST00000311052 ZNF652Q9Y2D9 606 aa23.54■■□□□ 1.36
CARHSP1-201ENST00000311052 LAMB4A4D0S4 1761 aa23.53■■□□□ 1.36
CARHSP1-201ENST00000311052 SETDB2Q96T68 719 aa23.53■■□□□ 1.36
CARHSP1-201ENST00000311052 SCN7AQ01118 1682 aa23.52■■□□□ 1.36
CARHSP1-201ENST00000311052 WWC3Q9ULE0 1092 aa23.52■■□□□ 1.36
CARHSP1-201ENST00000311052 CARMIL3Q8ND23 1372 aa23.52■■□□□ 1.36
CARHSP1-201ENST00000311052 ZNF853P0CG23 659 aa23.51■■□□□ 1.35
CARHSP1-201ENST00000311052 MYL6BP14649 208 aa23.51■■□□□ 1.35
CARHSP1-201ENST00000311052 EIF2S2P20042 333 aaKnown RBP23.51■■□□□ 1.35
CARHSP1-201ENST00000311052 KCNA3P22001 575 aa23.5■■□□□ 1.35
CARHSP1-201ENST00000311052 NGEFQ8N5V2 710 aa23.5■■□□□ 1.35
CARHSP1-201ENST00000311052 IFT57Q9NWB7 429 aa23.5■■□□□ 1.35
CARHSP1-201ENST00000311052 GNAI1P63096 354 aa23.49■■□□□ 1.35
CARHSP1-201ENST00000311052 MBIPQ9NS73 344 aa23.49■■□□□ 1.35
CARHSP1-201ENST00000311052 PIM2Q9P1W9 311 aa23.49■■□□□ 1.35
CARHSP1-201ENST00000311052 KIAA1551Q9HCM1 1747 aa23.48■■□□□ 1.35
CARHSP1-201ENST00000311052 ERVV-1B6SEH8 477 aa23.48■■□□□ 1.35
CARHSP1-201ENST00000311052 HOXB7P09629 217 aa23.48■■□□□ 1.35
CARHSP1-201ENST00000311052 CCDC27Q2M243 656 aa23.48■■□□□ 1.35
CARHSP1-201ENST00000311052 KRT24Q2M2I5 525 aa23.48■■□□□ 1.35
CARHSP1-201ENST00000311052 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
CARHSP1-201ENST00000311052 BCS1LQ9Y276 419 aa23.48■■□□□ 1.35
CARHSP1-201ENST00000311052 NRXN2Q9P2S2 1712 aa23.47■■□□□ 1.35
CARHSP1-201ENST00000311052 CHRNA5P30532 468 aa23.47■■□□□ 1.35
CARHSP1-201ENST00000311052 PDIA6Q15084 440 aa23.47■■□□□ 1.35
CARHSP1-201ENST00000311052 KIF6Q6ZMV9 814 aa23.47■■□□□ 1.35
CARHSP1-201ENST00000311052 HLFQ16534 295 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms