RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 STX6O43752 255 aa17.27■□□□□ 0.36
SCUBE2-201ENST00000309263 FLIIQ13045 1269 aa17.27■□□□□ 0.36
SCUBE2-201ENST00000309263 MYRIPQ8NFW9 859 aa17.27■□□□□ 0.36
SCUBE2-201ENST00000309263 SYT1P21579 422 aa17.27■□□□□ 0.35
SCUBE2-201ENST00000309263 AK2P54819 239 aa17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 ZNF592Q92610 1267 aa17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 CCDC94Q9BW85 323 aaPredicted RBP17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 IFT172Q9UG01 1749 aa17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 CKAP2LQ8IYA6 745 aa17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 PIBF1Q8WXW3 757 aa17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 TCEANC2Q96MN5 208 aa17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 SETD1BQ9UPS6 1966 aaKnown RBP17.26■□□□□ 0.35
SCUBE2-201ENST00000309263 GNAI3P08754 354 aa17.25■□□□□ 0.35
SCUBE2-201ENST00000309263 AMPHP49418 695 aa17.25■□□□□ 0.35
SCUBE2-201ENST00000309263 HMGN5P82970 282 aaKnown RBP17.25■□□□□ 0.35
SCUBE2-201ENST00000309263 MTHFSDQ2M296 383 aaKnown RBP17.25■□□□□ 0.35
SCUBE2-201ENST00000309263 ZSCAN22P10073 491 aaPredicted RBP17.25■□□□□ 0.35
SCUBE2-201ENST00000309263 CUL4AQ13619 759 aa17.25■□□□□ 0.35
SCUBE2-201ENST00000309263 FAM184AQ8NB25 1140 aa17.25■□□□□ 0.35
SCUBE2-201ENST00000309263 PRDM4Q9UKN5 801 aa17.25■□□□□ 0.35
SCUBE2-201ENST00000309263 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
SCUBE2-201ENST00000309263 KDM4FA0A1W2PPD8 638 aa17.24■□□□□ 0.35
SCUBE2-201ENST00000309263 RASEFQ8IZ41 740 aa17.24■□□□□ 0.35
SCUBE2-201ENST00000309263 INTS4Q96HW7 963 aaKnown RBP17.24■□□□□ 0.35
SCUBE2-201ENST00000309263 SLC26A8Q96RN1 970 aa17.24■□□□□ 0.35
SCUBE2-201ENST00000309263 DIAPH3Q9NSV4 1193 aa17.24■□□□□ 0.35
SCUBE2-201ENST00000309263 USP32Q8NFA0 1604 aa17.24■□□□□ 0.35
SCUBE2-201ENST00000309263 JAKMIP1Q96N16 626 aaKnown RBP17.24■□□□□ 0.35
SCUBE2-201ENST00000309263 ANKLE2Q86XL3 938 aa17.23■□□□□ 0.35
SCUBE2-201ENST00000309263 PDCL2Q8N4E4 241 aa17.23■□□□□ 0.35
SCUBE2-201ENST00000309263 PYCARDQ9ULZ3 195 aa17.23■□□□□ 0.35
SCUBE2-201ENST00000309263 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
SCUBE2-201ENST00000309263 ANXA1P04083 346 aa17.23■□□□□ 0.35
SCUBE2-201ENST00000309263 GJB2P29033 226 aa17.23■□□□□ 0.35
SCUBE2-201ENST00000309263 C16orf45Q96MC5 204 aaPredicted RBP17.23■□□□□ 0.35
SCUBE2-201ENST00000309263 PRPF40BQ6NWY9 871 aaKnown RBP17.23■□□□□ 0.35
SCUBE2-201ENST00000309263 KDM4AO75164 1064 aa17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 FBXW7Q969H0 707 aa17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 UBR1Q8IWV7 1749 aa17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 FOSBP53539 338 aa17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 UBE2HP62256 183 aa17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 STK3Q13188 491 aa17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 TFIP11Q9UBB9 837 aaKnown RBP17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 U2AF2P26368 475 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
SCUBE2-201ENST00000309263 LARGE1O95461 756 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 ATP6V1DQ9Y5K8 247 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 F13A1P00488 732 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 PTGS1P23219 599 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 ANAPC15P60006 121 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 SMAP1Q8IYB5 467 aaPredicted RBP17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 PRIMPOLQ96LW4 560 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 SNX14Q9Y5W7 946 aa17.21■□□□□ 0.35
SCUBE2-201ENST00000309263 CEP170BQ9Y4F5 1589 aaPredicted RBP17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 ATP2B3Q16720 1220 aa17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 LUZP1Q86V48 1076 aa17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 OSBPL3Q9H4L5 887 aa17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 CEBPZQ03701 1054 aaKnown RBP17.2■□□□□ 0.34
SCUBE2-201ENST00000309263 GOLGA6L6A8MZA4 724 aa17.19■□□□□ 0.34
SCUBE2-201ENST00000309263 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
SCUBE2-201ENST00000309263 CNTROBQ8N137 903 aa17.19■□□□□ 0.34
SCUBE2-201ENST00000309263 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
SCUBE2-201ENST00000309263 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
SCUBE2-201ENST00000309263 NPHP1O15259 732 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 LARP1BQ659C4 914 aaKnown RBP17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 PDRG1Q9NUG6 133 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 PODXL2Q9NZ53 605 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 A0A0G2JS52 829 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 CCDC192P0DO97 292 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 HSPA4P34932 840 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 LRMPQ12912 555 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 UVSSAQ2YD98 709 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 PPFIA3O75145 1194 aa17.18■□□□□ 0.34
SCUBE2-201ENST00000309263 RGS12O14924 1447 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 RHPN1Q8TCX5 695 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 AP5Z1O43299 807 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 CCDC186Q7Z3E2 898 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 ALKQ9UM73 1620 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 ADCK5Q3MIX3 580 aa17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 NAP1L2Q9ULW6 460 aaPredicted RBP17.17■□□□□ 0.34
SCUBE2-201ENST00000309263 TCHHQ07283 1943 aa17.16■□□□□ 0.34
SCUBE2-201ENST00000309263 BICD2Q8TD16 824 aa17.16■□□□□ 0.34
SCUBE2-201ENST00000309263 LETM1O95202 739 aaPredicted RBP17.16■□□□□ 0.34
SCUBE2-201ENST00000309263 ZNF771Q7L3S4 317 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms