RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ESF1Q9H501 851 aaKnown RBP13.34□□□□□ -0.27
PTPN7-201ENST00000309017 CDC42BPGQ6DT37 1551 aa13.34□□□□□ -0.27
PTPN7-201ENST00000309017 AATKQ6ZMQ8 1374 aa13.34□□□□□ -0.27
PTPN7-201ENST00000309017 HSPA4P34932 840 aa13.34□□□□□ -0.27
PTPN7-201ENST00000309017 PIK3C2BO00750 1634 aa13.33□□□□□ -0.27
PTPN7-201ENST00000309017 EIF2S2P20042 333 aaKnown RBP13.33□□□□□ -0.27
PTPN7-201ENST00000309017 GJB2P29033 226 aa13.33□□□□□ -0.27
PTPN7-201ENST00000309017 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.27
PTPN7-201ENST00000309017 JAKMIP1Q96N16 626 aaKnown RBP13.33□□□□□ -0.27
PTPN7-201ENST00000309017 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.27
PTPN7-201ENST00000309017 KIF20BQ96Q89 1820 aa13.33□□□□□ -0.27
PTPN7-201ENST00000309017 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
PTPN7-201ENST00000309017 IL25Q9H293 177 aa13.33□□□□□ -0.28
PTPN7-201ENST00000309017 SNX14Q9Y5W7 946 aa13.33□□□□□ -0.28
PTPN7-201ENST00000309017 LTV1Q96GA3 475 aaPredicted RBP13.32□□□□□ -0.28
PTPN7-201ENST00000309017 TPM3P06753 285 aa13.32□□□□□ -0.28
PTPN7-201ENST00000309017 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
PTPN7-201ENST00000309017 PDRG1Q9NUG6 133 aa13.32□□□□□ -0.28
PTPN7-201ENST00000309017 PYCARDQ9ULZ3 195 aa13.32□□□□□ -0.28
PTPN7-201ENST00000309017 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
PTPN7-201ENST00000309017 SIGLEC1Q9BZZ2 1709 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 YEATS2Q9ULM3 1422 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 PRPF40BQ6NWY9 871 aaKnown RBP13.31□□□□□ -0.28
PTPN7-201ENST00000309017 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 ZNF710Q8N1W2 664 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 SSH2Q76I76 1423 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
PTPN7-201ENST00000309017 CKAP2LQ8IYA6 745 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 ZNF592Q92610 1267 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 TRIM5Q9C035 493 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 RAD50Q92878 1312 aa13.31□□□□□ -0.28
PTPN7-201ENST00000309017 IGSF3O75054 1194 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 HDGFL1Q5TGJ6 251 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 RUFY3Q7L099 469 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 NECAB1Q8N987 351 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 RHPN1Q8TCX5 695 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-201ENST00000309017 SGSM2O43147 1006 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 ZKSCAN1P17029 563 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-201ENST00000309017 LARP1BQ659C4 914 aaKnown RBP13.3□□□□□ -0.28
PTPN7-201ENST00000309017 C16orf45Q96MC5 204 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-201ENST00000309017 NUP62CLQ9H1M0 184 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
PTPN7-201ENST00000309017 PTGS1P23219 599 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 STAP2Q9UGK3 403 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
PTPN7-201ENST00000309017 KRT85P78386 507 aa13.29□□□□□ -0.28
PTPN7-201ENST00000309017 MAP3K11Q16584 847 aa13.29□□□□□ -0.28
PTPN7-201ENST00000309017 MAP3K19Q56UN5 1328 aa13.29□□□□□ -0.28
PTPN7-201ENST00000309017 RPAP1Q9BWH6 1393 aaPredicted RBP13.29□□□□□ -0.28
PTPN7-201ENST00000309017 KIF1BPQ96EK5 621 aa13.29□□□□□ -0.28
PTPN7-201ENST00000309017 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.28
PTPN7-201ENST00000309017 DMTNQ08495 405 aa13.29□□□□□ -0.28
PTPN7-201ENST00000309017 TMEM87AQ8NBN3 555 aa13.29□□□□□ -0.28
PTPN7-201ENST00000309017 TNMDQ9H2S6 317 aa13.29□□□□□ -0.28
PTPN7-201ENST00000309017 ATP2B3Q16720 1220 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 FAM173BQ6P4H8 233 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 ACEP12821 1306 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 LARGE1O95461 756 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 LUZP1Q86V48 1076 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 KIAA1524Q8TCG1 905 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 BICD2Q8TD16 824 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 SALL3Q9BXA9 1300 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 RAB11FIP3O75154 756 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
PTPN7-201ENST00000309017 CCDC186Q7Z3E2 898 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 USP44Q9H0E7 712 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 DLG5Q8TDM6 1919 aa13.28□□□□□ -0.28
PTPN7-201ENST00000309017 CLASRPQ8N2M8 674 aaKnown RBP13.27□□□□□ -0.29
PTPN7-201ENST00000309017 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
PTPN7-201ENST00000309017 FAM200AQ8TCP9 573 aa13.27□□□□□ -0.29
PTPN7-201ENST00000309017 SPTLC3Q9NUV7 552 aa13.27□□□□□ -0.29
PTPN7-201ENST00000309017 PODXL2Q9NZ53 605 aa13.27□□□□□ -0.29
PTPN7-201ENST00000309017 TFIP11Q9UBB9 837 aaKnown RBP13.27□□□□□ -0.29
PTPN7-201ENST00000309017 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.29
PTPN7-201ENST00000309017 GPATCH3Q96I76 525 aa13.27□□□□□ -0.29
PTPN7-201ENST00000309017 CPS1P31327 1500 aa13.27□□□□□ -0.29
PTPN7-201ENST00000309017 TCHHQ07283 1943 aa13.27□□□□□ -0.29
PTPN7-201ENST00000309017 TPD52L1Q16890 204 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-201ENST00000309017 ZSCAN31Q96LW9 406 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-201ENST00000309017 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
PTPN7-201ENST00000309017 MTMR6Q9Y217 621 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 ZSCAN20P17040 1043 aaPredicted RBP13.26□□□□□ -0.29
PTPN7-201ENST00000309017 STK3Q13188 491 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 TCEANC2Q96MN5 208 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 TYRO3Q06418 890 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 NUTM2GQ5VZR2 741 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 LSG1Q9H089 658 aaKnown RBP13.26□□□□□ -0.29
PTPN7-201ENST00000309017 KCNF1Q9H3M0 494 aa13.26□□□□□ -0.29
PTPN7-201ENST00000309017 GTF2F1P35269 517 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■□□□□ 10.7
PTPN7-201ENST00000309017 SH2B1Q9NRF2 756 aaPredicted RBP13.25□□□□□ -0.29
PTPN7-201ENST00000309017 AOX1Q06278 1338 aa13.25□□□□□ -0.29
PTPN7-201ENST00000309017 AP5Z1O43299 807 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms