RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 PTF1AQ7RTS3 328 aa16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 SYTL4Q96C24 671 aaPredicted RBP16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 PTPRCP08575 1304 aa16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 FAM196AQ6ZSG2 479 aa16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 TTC5Q8N0Z6 440 aa16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 TNNQ9UQP3 1299 aa16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 C5P01031 1676 aa16.33■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 FMNL2Q96PY5 1086 aa16.33■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 ABCC4O15439 1325 aa16.32■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 BTAF1O14981 1849 aa16.32■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 TCERG1O14776 1098 aaKnown RBP16.31■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 DDX19BQ9UMR2 479 aa16.31■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 KAT6BQ8WYB5 2073 aa16.3■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 CHMP4BQ9H444 224 aaKnown RBP16.3■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 PTCD1O75127 700 aaKnown RBP16.3■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 HDGFL1Q5TGJ6 251 aa16.3■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 VSIG10Q8N0Z9 540 aa16.29■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 INTS3Q68E01 1043 aaKnown RBP16.28■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 ZNF831Q5JPB2 1677 aa16.28■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 USP16Q9Y5T5 823 aa16.27■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 TJP1Q07157 1748 aa16.27■□□□□ 0.2
SHANK2-AS3-201ENST00000307548 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 FLIIQ13045 1269 aa16.26■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 G2E3Q7L622 706 aa16.26■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 ITPRIPQ8IWB1 547 aa16.26■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 ZBTB40Q9NUA8 1239 aa16.26■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 ZBTB7BO15156 539 aaPredicted RBP16.25■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 RBM42Q9BTD8 480 aaKnown RBP16.25■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 LY75O60449 1722 aa16.25■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 KDM2BQ8NHM5 1336 aa16.25■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 TRIM37O94972 964 aa16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 EIF2S2P20042 333 aaKnown RBP16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 SIK1P57059 783 aa16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 PDIA6Q15084 440 aa16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 DNAJC10Q8IXB1 793 aa16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 CENPQQ7L2Z9 268 aaPredicted RBP16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 TEX13AQ9BXU3 409 aaPredicted RBP16.24■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 LRP10Q7Z4F1 713 aa16.23■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 DDX21Q9NR30 783 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 HYPKQ9NX55 129 aa16.23■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 CHPF2Q9P2E5 772 aa16.23■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 TNS1Q9HBL0 1735 aaKnown RBP16.23■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 ERBB4Q15303 1308 aa16.22■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 CCT4P50991 539 aaKnown RBP16.22■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 ITPK1Q13572 414 aa16.22■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 PROSER3Q2NL68 480 aa16.22■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 PCDHB15Q9Y5E8 787 aa16.22■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 COL5A3P25940 1745 aaPredicted RBP16.21■□□□□ 0.19
SHANK2-AS3-201ENST00000307548 RREB1Q92766 1687 aa16.21■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 NBPF26B4DH59 902 aa16.21■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 NBPF14Q5TI25 921 aa16.21■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 NBPF10Q6P3W6 841 aaKnown RBP16.21■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 NBPF15Q8N660 670 aa16.21■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 PXDNLA1KZ92 1463 aa16.2■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 ANXA1P04083 346 aa16.2■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 STARD3NLO95772 234 aa16.19■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 A1BGP04217 495 aa16.19■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 RWDD1Q9H446 243 aaPredicted RBP16.19■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 HDAC1Q13547 482 aaPredicted RBP16.18■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 PLSCR1O15162 318 aa16.18■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 MSH5O43196 834 aa16.18■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 IGHDP01880 384 aa16.18■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 RGPD3A6NKT7 1758 aaPredicted RBP16.17■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 RGPD4Q7Z3J3 1758 aa16.17■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 F6X3S4 739 aa16.17■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 PIP4K2AP48426 406 aaPredicted RBP16.17■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 INTS5Q6P9B9 1019 aaKnown RBP16.17■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 LINC00116Q8NCU8 138 aa16.17■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 CCNL1Q9UK58 526 aaPredicted RBP16.17■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 TAF1LQ8IZX4 1826 aa16.16■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 KCNQ4P56696 695 aa16.16■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 PROM2Q8N271 834 aa16.16■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 LRRC4BQ9NT99 713 aa16.16■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 MYH14Q7Z406 1995 aaKnown RBP16.16■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 N4BP2Q86UW6 1770 aaPredicted RBP16.16■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 IBTKQ9P2D0 1353 aaPredicted RBP16.16■□□□□ 0.18
SHANK2-AS3-201ENST00000307548 APBA3O96018 575 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms