RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
PHTF2-203ENST00000307305 KLHDC4Q8TBB5 520 aa13.49□□□□□ -0.25
PHTF2-203ENST00000307305 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
PHTF2-203ENST00000307305 ATP5J2-PTCD1G3V325 749 aa13.49□□□□□ -0.25
PHTF2-203ENST00000307305 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
PHTF2-203ENST00000307305 CDK11BP21127 795 aaKnown RBP13.49□□□□□ -0.25
PHTF2-203ENST00000307305 SLC39A6Q13433 755 aa13.49□□□□□ -0.25
PHTF2-203ENST00000307305 PLEKHO1Q53GL0 409 aaPredicted RBP13.49□□□□□ -0.25
PHTF2-203ENST00000307305 ATP8B2P98198 1209 aa13.49□□□□□ -0.25
PHTF2-203ENST00000307305 ABCC1P33527 1531 aa13.49□□□□□ -0.25
PHTF2-203ENST00000307305 TRMT1Q9NXH9 659 aaKnown RBP13.48□□□□□ -0.25
PHTF2-203ENST00000307305 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
PHTF2-203ENST00000307305 A0A0U1RQG5 324 aaPredicted RBP13.48□□□□□ -0.25
PHTF2-203ENST00000307305 SYTL4Q96C24 671 aaPredicted RBP13.48□□□□□ -0.25
PHTF2-203ENST00000307305 PDCL3Q9H2J4 239 aa13.48□□□□□ -0.25
PHTF2-203ENST00000307305 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
PHTF2-203ENST00000307305 CHL1O00533 1208 aa13.48□□□□□ -0.25
PHTF2-203ENST00000307305 SMC2O95347 1197 aa13.48□□□□□ -0.25
PHTF2-203ENST00000307305 NBPF7P0C2Y1 421 aaPredicted RBP13.48□□□□□ -0.25
PHTF2-203ENST00000307305 ISM2Q6H9L7 571 aa13.48□□□□□ -0.25
PHTF2-203ENST00000307305 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
PHTF2-203ENST00000307305 KINO60870 393 aaKnown RBP13.47□□□□□ -0.25
PHTF2-203ENST00000307305 MAP3K11Q16584 847 aa13.47□□□□□ -0.25
PHTF2-203ENST00000307305 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
PHTF2-203ENST00000307305 OFD1O75665 1012 aa13.47□□□□□ -0.25
PHTF2-203ENST00000307305 ZSCAN22P10073 491 aaPredicted RBP13.47□□□□□ -0.25
PHTF2-203ENST00000307305 PDCP20941 246 aa13.47□□□□□ -0.25
PHTF2-203ENST00000307305 SYT1P21579 422 aa13.47□□□□□ -0.25
PHTF2-203ENST00000307305 KIF3AQ9Y496 699 aa13.47□□□□□ -0.25
PHTF2-203ENST00000307305 ABCC4O15439 1325 aa13.47□□□□□ -0.25
PHTF2-203ENST00000307305 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
PHTF2-203ENST00000307305 MYD88Q99836 296 aa13.46□□□□□ -0.25
PHTF2-203ENST00000307305 ECHDC1Q9NTX5 307 aa13.46□□□□□ -0.26
PHTF2-203ENST00000307305 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
PHTF2-203ENST00000307305 KIF2CQ99661 725 aa13.45□□□□□ -0.26
PHTF2-203ENST00000307305 SNRKQ9NRH2 765 aa13.45□□□□□ -0.26
PHTF2-203ENST00000307305 BIN1O00499 593 aa13.45□□□□□ -0.26
PHTF2-203ENST00000307305 CHST3Q7LGC8 479 aa13.45□□□□□ -0.26
PHTF2-203ENST00000307305 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
PHTF2-203ENST00000307305 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
PHTF2-203ENST00000307305 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
PHTF2-203ENST00000307305 SYNE3Q6ZMZ3 975 aa13.45□□□□□ -0.26
PHTF2-203ENST00000307305 DDX46Q7L014 1031 aaKnown RBP13.45□□□□□ -0.26
PHTF2-203ENST00000307305 LGR6Q9HBX8 967 aa13.45□□□□□ -0.26
PHTF2-203ENST00000307305 TPM4P67936 248 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 NOLC1Q14978 699 aaKnown RBP eCLIP13.44□□□□□ -0.26
PHTF2-203ENST00000307305 MYO5CQ9NQX4 1742 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 PREX2Q70Z35 1606 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 LETM1O95202 739 aaPredicted RBP13.44□□□□□ -0.26
PHTF2-203ENST00000307305 NFXL1Q6ZNB6 911 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 RBM8AQ9Y5S9 174 aaKnown RBP13.44□□□□□ -0.26
PHTF2-203ENST00000307305 CLTCL1P53675 1640 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 PDILTQ8N807 584 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 EDC3Q96F86 508 aaKnown RBP13.44□□□□□ -0.26
PHTF2-203ENST00000307305 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 POLR1AO95602 1720 aaPredicted RBP13.44□□□□□ -0.26
PHTF2-203ENST00000307305 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 KCNQ3O43525 872 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 MAP7D2Q96T17 732 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 CDC42BPBQ9Y5S2 1711 aa13.44□□□□□ -0.26
PHTF2-203ENST00000307305 HAND2P61296 217 aa13.43□□□□□ -0.26
PHTF2-203ENST00000307305 STK38Q15208 465 aa13.43□□□□□ -0.26
PHTF2-203ENST00000307305 RALYLQ86SE5 291 aaKnown RBP13.43□□□□□ -0.26
PHTF2-203ENST00000307305 PDCL2Q8N4E4 241 aa13.43□□□□□ -0.26
PHTF2-203ENST00000307305 UBE2HP62256 183 aa13.43□□□□□ -0.26
PHTF2-203ENST00000307305 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
PHTF2-203ENST00000307305 PUS7Q96PZ0 661 aaKnown RBP13.43□□□□□ -0.26
PHTF2-203ENST00000307305 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
PHTF2-203ENST00000307305 CCDC186Q7Z3E2 898 aa13.43□□□□□ -0.26
PHTF2-203ENST00000307305 UBE3BQ7Z3V4 1068 aa13.43□□□□□ -0.26
PHTF2-203ENST00000307305 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
PHTF2-203ENST00000307305 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
PHTF2-203ENST00000307305 CCDC82Q8N4S0 544 aa13.42□□□□□ -0.26
PHTF2-203ENST00000307305 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
PHTF2-203ENST00000307305 TRPM2O94759 1503 aa13.42□□□□□ -0.26
PHTF2-203ENST00000307305 F13A1P00488 732 aa13.42□□□□□ -0.26
PHTF2-203ENST00000307305 FAM227BQ96M60 508 aa13.42□□□□□ -0.26
PHTF2-203ENST00000307305 ZNF445P59923 1031 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 CCDC112Q8NEF3 446 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 TMX1Q9H3N1 280 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 MTMR7Q9Y216 660 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 HSP90AA4PQ58FG1 418 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 ERCC4Q92889 916 aaPredicted RBP13.41□□□□□ -0.26
PHTF2-203ENST00000307305 BRF1Q92994 677 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 ZNF165P49910 485 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 ZSCAN31Q96LW9 406 aaPredicted RBP13.41□□□□□ -0.26
PHTF2-203ENST00000307305 NOL7Q9UMY1 257 aaKnown RBP13.41□□□□□ -0.26
PHTF2-203ENST00000307305 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 POGZQ7Z3K3 1410 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 PTGS1P23219 599 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 NMIQ13287 307 aaPredicted RBP13.41□□□□□ -0.26
PHTF2-203ENST00000307305 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 DNAJC25Q9H1X3 360 aa13.41□□□□□ -0.26
PHTF2-203ENST00000307305 TRDNQ13061 729 aa13.4□□□□□ -0.26
PHTF2-203ENST00000307305 ANO6Q4KMQ2 910 aa13.4□□□□□ -0.26
PHTF2-203ENST00000307305 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
PHTF2-203ENST00000307305 USP44Q9H0E7 712 aa13.4□□□□□ -0.26
PHTF2-203ENST00000307305 DBF4Q9UBU7 674 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms