RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 FCHSD2O94868 740 aa10.19□□□□□ -0.78
TM4SF1-201ENST00000305366 CCDC87Q9NVE4 849 aa10.19□□□□□ -0.78
TM4SF1-201ENST00000305366 RCAN3Q9UKA8 241 aa10.19□□□□□ -0.78
TM4SF1-201ENST00000305366 TUBGCP6Q96RT7 1819 aa10.19□□□□□ -0.78
TM4SF1-201ENST00000305366 KDM6AO15550 1401 aaPredicted RBP10.19□□□□□ -0.78
TM4SF1-201ENST00000305366 DNAJC10Q8IXB1 793 aa10.19□□□□□ -0.78
TM4SF1-201ENST00000305366 C5P01031 1676 aa10.18□□□□□ -0.78
TM4SF1-201ENST00000305366 TGFB2P61812 414 aa10.18□□□□□ -0.78
TM4SF1-201ENST00000305366 AKAP4Q5JQC9 854 aa10.18□□□□□ -0.78
TM4SF1-201ENST00000305366 TOGARAM1Q9Y4F4 1720 aa10.18□□□□□ -0.78
TM4SF1-201ENST00000305366 CNTNAP4Q9C0A0 1308 aa10.17□□□□□ -0.78
TM4SF1-201ENST00000305366 U2SURPO15042 1029 aaKnown RBP10.17□□□□□ -0.78
TM4SF1-201ENST00000305366 INTS5Q6P9B9 1019 aaKnown RBP10.17□□□□□ -0.78
TM4SF1-201ENST00000305366 KDRP35968 1356 aa10.17□□□□□ -0.78
TM4SF1-201ENST00000305366 RNMTO43148 476 aaKnown RBP10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 DIAPH1O60610 1272 aaKnown RBP10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 ZPR1O75312 459 aa10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 CHRNA5P30532 468 aa10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 MTHFSDQ2M296 383 aaKnown RBP10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 USPL1Q5W0Q7 1092 aa10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 SLC52A2Q9HAB3 445 aa10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 PPP2R1AP30153 589 aa10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 QSER1Q2KHR3 1735 aa10.16□□□□□ -0.78
TM4SF1-201ENST00000305366 CANXP27824 592 aaKnown RBP10.15□□□□□ -0.78
TM4SF1-201ENST00000305366 DDR1Q08345 913 aa10.15□□□□□ -0.78
TM4SF1-201ENST00000305366 PIM2Q9P1W9 311 aa10.15□□□□□ -0.78
TM4SF1-201ENST00000305366 ZNF330Q9Y3S2 320 aaPredicted RBP10.15□□□□□ -0.78
TM4SF1-201ENST00000305366 PKD1L3Q7Z443 1732 aa10.15□□□□□ -0.79
TM4SF1-201ENST00000305366 KCNA3P22001 575 aa10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 DALRD3Q5D0E6 543 aaKnown RBP10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 C9orf131Q5VYM1 1079 aa10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 BICDL1Q6ZP65 573 aa10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 PXDNLA1KZ92 1463 aa10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 MAP2P11137 1827 aaKnown RBP10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 KIF3CO14782 793 aa10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 CYP19A1P11511 503 aaPredicted RBP10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 HSPA6P17066 643 aa10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 BCL11AQ9H165 835 aa10.14□□□□□ -0.79
TM4SF1-201ENST00000305366 USP42Q9H9J4 1324 aaKnown RBP10.13□□□□□ -0.79
TM4SF1-201ENST00000305366 NMRK2Q9NPI5 230 aa10.13□□□□□ -0.79
TM4SF1-201ENST00000305366 ADAMTS8Q9UP79 889 aa10.13□□□□□ -0.79
TM4SF1-201ENST00000305366 ITGB4P16144 1822 aa10.13□□□□□ -0.79
TM4SF1-201ENST00000305366 ZNF521Q96K83 1311 aa10.13□□□□□ -0.79
TM4SF1-201ENST00000305366 ADCY9O60503 1353 aa10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 CICQ96RK0 1608 aaPredicted RBP10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 POLRMTO00411 1230 aaKnown RBP10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 TM4SF1P30408 202 aa10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 TTC5Q8N0Z6 440 aa10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 EXOC6Q8TAG9 804 aa10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 CDCA7LQ96GN5 454 aa10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 ZBTB1Q9Y2K1 713 aa10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 COL24A1Q17RW2 1714 aa10.12□□□□□ -0.79
TM4SF1-201ENST00000305366 CHD4Q14839 1912 aa10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 NFIXQ14938 502 aa10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 WDR43Q15061 677 aaKnown RBP eCLIP10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 CCDC24Q8N4L8 307 aa10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 RNF181Q9P0P0 153 aa10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 TEFQ10587 303 aa10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 ZNF219Q9P2Y4 722 aaPredicted RBP10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 SALL2Q9Y467 1007 aaPredicted RBP10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 SOS1Q07889 1333 aaPredicted RBP10.11□□□□□ -0.79
TM4SF1-201ENST00000305366 PLEKHG2Q9H7P9 1386 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 C10orf71Q711Q0 1435 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 TAF1LQ8IZX4 1826 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 TCERG1O14776 1098 aaKnown RBP10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 SERPINB2P05120 415 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 NGEFQ8N5V2 710 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 IL17REQ8NFR9 667 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 NARFQ9UHQ1 456 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 TBC1D2BQ9UPU7 963 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 ANKRD26Q9UPS8 1709 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 UBR3Q6ZT12 1888 aa10.1□□□□□ -0.79
TM4SF1-201ENST00000305366 GNAT3A8MTJ3 354 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 STARD3NLO95772 234 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 ZNF496Q96IT1 587 aaPredicted RBP10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 RRAGCQ9HB90 399 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 MS4A1P11836 297 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 PIP4K2AP48426 406 aaPredicted RBP10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 HTRA3P83110 453 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 RASSF7Q02833 373 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 DUSP27Q5VZP5 1158 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 C2CD5Q86YS7 1000 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 PHACTR3Q96KR7 559 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 BCL2L12Q9HB09 334 aa10.09□□□□□ -0.79
TM4SF1-201ENST00000305366 NPHP1O15259 732 aa10.08□□□□□ -0.8
TM4SF1-201ENST00000305366 KCNQ3O43525 872 aa10.08□□□□□ -0.8
TM4SF1-201ENST00000305366 TOMM70O94826 608 aa10.08□□□□□ -0.8
TM4SF1-201ENST00000305366 A1BGP04217 495 aa10.08□□□□□ -0.8
TM4SF1-201ENST00000305366 PRKAR2BP31323 418 aa10.08□□□□□ -0.8
TM4SF1-201ENST00000305366 ZNF622Q969S3 477 aaKnown RBP eCLIP10.08□□□□□ -0.8
TM4SF1-201ENST00000305366 COL15A1P39059 1388 aa10.08□□□□□ -0.8
TM4SF1-201ENST00000305366 GOLGA2Q08379 1002 aa10.07□□□□□ -0.8
TM4SF1-201ENST00000305366 TBC1D9BQ66K14 1250 aa10.07□□□□□ -0.8
TM4SF1-201ENST00000305366 ZNF790Q6PG37 636 aa10.07□□□□□ -0.8
TM4SF1-201ENST00000305366 TRMT2AQ8IZ69 625 aaKnown RBP10.07□□□□□ -0.8
TM4SF1-201ENST00000305366 GAS2L2Q8NHY3 880 aa10.07□□□□□ -0.8
TM4SF1-201ENST00000305366 CFAP53Q96M91 514 aa10.07□□□□□ -0.8
TM4SF1-201ENST00000305366 CEP350Q5VT06 3117 aa10.07□□□□□ -0.8
TM4SF1-201ENST00000305366 BTBD11A6QL63 1104 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms