RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 TRMT1Q9NXH9 659 aaKnown RBP23.03■■□□□ 1.28
CTNND2-201ENST00000304623 KIF20AO95235 890 aa23.03■■□□□ 1.28
CTNND2-201ENST00000304623 CTCFLQ8NI51 663 aaPredicted RBP23.03■■□□□ 1.28
CTNND2-201ENST00000304623 TAF7Q15545 349 aaPredicted RBP23.03■■□□□ 1.28
CTNND2-201ENST00000304623 DHX37Q8IY37 1157 aaKnown RBP23.03■■□□□ 1.28
CTNND2-201ENST00000304623 NUDT16Q96DE0 195 aaKnown RBP23.03■■□□□ 1.28
CTNND2-201ENST00000304623 STX6O43752 255 aa23.03■■□□□ 1.28
CTNND2-201ENST00000304623 MIS18AQ9NYP9 233 aa23.03■■□□□ 1.28
CTNND2-201ENST00000304623 ABCF2Q9UG63 623 aa23.03■■□□□ 1.28
CTNND2-201ENST00000304623 ZSCAN29Q8IWY8 852 aaPredicted RBP23.02■■□□□ 1.28
CTNND2-201ENST00000304623 POLR3GO15318 223 aaPredicted RBP23.02■■□□□ 1.28
CTNND2-201ENST00000304623 CCDC113Q9H0I3 377 aa23.02■■□□□ 1.28
CTNND2-201ENST00000304623 PTPRCP08575 1304 aa23.02■■□□□ 1.28
CTNND2-201ENST00000304623 STARD3NLO95772 234 aa23.02■■□□□ 1.28
CTNND2-201ENST00000304623 KCNH5Q8NCM2 988 aa23.02■■□□□ 1.28
CTNND2-201ENST00000304623 PRXQ9BXM0 1461 aa23.02■■□□□ 1.28
CTNND2-201ENST00000304623 GCOM1H8Y6P7 765 aaPredicted RBP23.02■■□□□ 1.27
CTNND2-201ENST00000304623 MYZAPP0CAP1 466 aa23.02■■□□□ 1.27
CTNND2-201ENST00000304623 NAIPQ13075 1403 aa23.01■■□□□ 1.27
CTNND2-201ENST00000304623 SUPT6HQ7KZ85 1726 aaKnown RBP23.01■■□□□ 1.27
CTNND2-201ENST00000304623 SMC1AQ14683 1233 aaKnown RBP23.01■■□□□ 1.27
CTNND2-201ENST00000304623 NAA15Q9BXJ9 866 aaKnown RBP23.01■■□□□ 1.27
CTNND2-201ENST00000304623 SPINK5Q9NQ38 1064 aaPredicted RBP23.01■■□□□ 1.27
CTNND2-201ENST00000304623 SLC12A7Q9Y666 1083 aa23.01■■□□□ 1.27
CTNND2-201ENST00000304623 SMARCC1Q92922 1105 aaPredicted RBP23.01■■□□□ 1.27
CTNND2-201ENST00000304623 MATR3P43243 847 aaKnown RBP eCLIP23.01■■□□□ 1.27
CTNND2-201ENST00000304623 UBE2HP62256 183 aa23.01■■□□□ 1.27
CTNND2-201ENST00000304623 SSRP1Q08945 709 aaKnown RBP23.01■■□□□ 1.27
CTNND2-201ENST00000304623 CCDC178Q5BJE1 867 aa23.01■■□□□ 1.27
CTNND2-201ENST00000304623 TMC6Q7Z403 805 aa23.01■■□□□ 1.27
CTNND2-201ENST00000304623 EVI5LQ96CN4 794 aa23.01■■□□□ 1.27
CTNND2-201ENST00000304623 PAXBP1Q9Y5B6 917 aa23.01■■□□□ 1.27
CTNND2-201ENST00000304623 ZNF213O14771 459 aa23■■□□□ 1.27
CTNND2-201ENST00000304623 GJB2P29033 226 aa23■■□□□ 1.27
CTNND2-201ENST00000304623 GUCY1B3Q02153 619 aa23■■□□□ 1.27
CTNND2-201ENST00000304623 TBC1D9Q6ZT07 1266 aa23■■□□□ 1.27
CTNND2-201ENST00000304623 SNW1Q13573 536 aaKnown RBP23■■□□□ 1.27
CTNND2-201ENST00000304623 SKAP1Q86WV1 359 aa23■■□□□ 1.27
CTNND2-201ENST00000304623 BMS1Q14692 1282 aaKnown RBP23■■□□□ 1.27
CTNND2-201ENST00000304623 TBC1D32Q96NH3 1257 aa23■■□□□ 1.27
CTNND2-201ENST00000304623 RNF41Q9H4P4 317 aaPredicted RBP23■■□□□ 1.27
CTNND2-201ENST00000304623 NCAPD3P42695 1498 aa23■■□□□ 1.27
CTNND2-201ENST00000304623 CCDC150Q8NCX0 1101 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 CCDC85AQ96PX6 553 aaPredicted RBP22.99■■□□□ 1.27
CTNND2-201ENST00000304623 MINDY4BA8MYZ0 360 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 TRIM27P14373 513 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 MAP3K12Q12852 859 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 TNIP1Q15025 636 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 ALS2CR12Q96Q35 445 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 PRDM11Q9NQV5 511 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 CCDC141Q6ZP82 1450 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 MPHOSPH10O00566 681 aaKnown RBP22.99■■□□□ 1.27
CTNND2-201ENST00000304623 ZNF165P49910 485 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 TMEM266Q2M3C6 531 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 DNAAF4Q8WXU2 420 aa22.99■■□□□ 1.27
CTNND2-201ENST00000304623 NEBLO76041 1014 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 PPP4R3BQ5MIZ7 849 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 IQCA1Q86XH1 822 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 GOLGA8BA8MQT2 603 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 PODXL2Q9NZ53 605 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 GOLGA6L10A0A0M3HER8 536 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 GOLGA8AA7E2F4 631 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 CPLX3Q8WVH0 158 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 MYD88Q99836 296 aa22.98■■□□□ 1.27
CTNND2-201ENST00000304623 CAVIN4Q5BKX8 364 aa22.97■■□□□ 1.27
CTNND2-201ENST00000304623 CCDC8Q9H0W5 538 aaPredicted RBP22.97■■□□□ 1.27
CTNND2-201ENST00000304623 MKNK2Q9HBH9 465 aa22.97■■□□□ 1.27
CTNND2-201ENST00000304623 PYM1Q9BRP8 204 aaKnown RBP22.97■■□□□ 1.27
CTNND2-201ENST00000304623 GSTTP1A0A1W2PQM5 241 aa22.97■■□□□ 1.27
CTNND2-201ENST00000304623 TDRD12Q587J7 1177 aaKnown RBP22.97■■□□□ 1.27
CTNND2-201ENST00000304623 ECHDC1Q9NTX5 307 aa22.96■■□□□ 1.27
CTNND2-201ENST00000304623 TRIM21P19474 475 aaKnown RBP22.96■■□□□ 1.27
CTNND2-201ENST00000304623 AMOTQ4VCS5 1084 aa22.96■■□□□ 1.27
CTNND2-201ENST00000304623 RNF187Q5TA31 235 aaPredicted RBP22.96■■□□□ 1.27
CTNND2-201ENST00000304623 GDPD2Q9HCC8 539 aa22.96■■□□□ 1.27
CTNND2-201ENST00000304623 GTF2F1P35269 517 aaKnown RBP eCLIP22.96■■□□□ 1.27
CTNND2-201ENST00000304623 KANK3Q6NY19 840 aa22.96■■□□□ 1.27
CTNND2-201ENST00000304623 CEP135Q66GS9 1140 aa22.95■■□□□ 1.27
CTNND2-201ENST00000304623 TAOK3Q9H2K8 898 aa22.95■■□□□ 1.27
CTNND2-201ENST00000304623 CCDC194A0A1B0GVG4 234 aa22.95■■□□□ 1.26
CTNND2-201ENST00000304623 POLR3DP05423 398 aaPredicted RBP22.95■■□□□ 1.26
CTNND2-201ENST00000304623 CCDC171Q6TFL3 1326 aa22.95■■□□□ 1.26
CTNND2-201ENST00000304623 TFIP11Q9UBB9 837 aaKnown RBP22.95■■□□□ 1.26
CTNND2-201ENST00000304623 SYNJ1O43426 1573 aa22.95■■□□□ 1.26
CTNND2-201ENST00000304623 LRSAM1Q6UWE0 723 aa22.95■■□□□ 1.26
CTNND2-201ENST00000304623 F6X3S4 739 aa22.94■■□□□ 1.26
CTNND2-201ENST00000304623 CCDC175P0C221 793 aa22.94■■□□□ 1.26
CTNND2-201ENST00000304623 ZSCAN23Q3MJ62 389 aa22.94■■□□□ 1.26
CTNND2-201ENST00000304623 CTR9Q6PD62 1173 aa22.94■■□□□ 1.26
CTNND2-201ENST00000304623 GOPCQ9HD26 462 aa22.94■■□□□ 1.26
CTNND2-201ENST00000304623 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.94■■□□□ 1.26
CTNND2-201ENST00000304623 IFIT3O14879 490 aaKnown RBP22.94■■□□□ 1.26
CTNND2-201ENST00000304623 SPECC1Q5M775 1068 aa22.94■■□□□ 1.26
CTNND2-201ENST00000304623 DNAI2Q9GZS0 605 aa22.94■■□□□ 1.26
CTNND2-201ENST00000304623 HMG20BQ9P0W2 317 aa22.94■■□□□ 1.26
CTNND2-201ENST00000304623 MTIF2P46199 727 aaKnown RBP22.94■■□□□ 1.26
CTNND2-201ENST00000304623 HYPKQ9NX55 129 aa22.93■■□□□ 1.26
CTNND2-201ENST00000304623 IFIT5Q13325 482 aaKnown RBP22.93■■□□□ 1.26
CTNND2-201ENST00000304623 TTC22Q5TAA0 569 aa22.93■■□□□ 1.26
CTNND2-201ENST00000304623 CCT2P78371 535 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms