RNA–Protein interactions for RNA: ENST00000304613.7

KNDC1-201, Transcript of kinase non-catalytic C-lobe domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNDC1, Length 6,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNDC1-201ENST00000304613 ESPNB1AK53 854 aa16.66■□□□□ 0.26
KNDC1-201ENST00000304613 ZNF213O14771 459 aa16.66■□□□□ 0.26
KNDC1-201ENST00000304613 TMCO3Q6UWJ1 677 aa16.66■□□□□ 0.26
KNDC1-201ENST00000304613 NLRP5P59047 1200 aa16.66■□□□□ 0.26
KNDC1-201ENST00000304613 TOP1P11387 765 aaKnown RBP16.65■□□□□ 0.26
KNDC1-201ENST00000304613 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 CCDC144CPQ8IYA2 1237 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 CUL5Q93034 780 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 NSD3Q9BZ95 1437 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 CC2D2AQ9P2K1 1620 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
KNDC1-201ENST00000304613 KIF5CO60282 957 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 PSMD1Q99460 953 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 RAB11FIP3O75154 756 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 GPTP24298 496 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
KNDC1-201ENST00000304613 ANO10Q9NW15 660 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 HFM1A2PYH4 1435 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 IFFO1Q0D2I5 559 aa16.65■□□□□ 0.26
KNDC1-201ENST00000304613 IFIT3O14879 490 aaKnown RBP16.64■□□□□ 0.25
KNDC1-201ENST00000304613 UBE4AQ14139 1066 aa16.64■□□□□ 0.25
KNDC1-201ENST00000304613 PDCL2Q8N4E4 241 aa16.64■□□□□ 0.25
KNDC1-201ENST00000304613 VAT1LQ9HCJ6 419 aa16.64■□□□□ 0.25
KNDC1-201ENST00000304613 INCENPQ9NQS7 918 aa16.64■□□□□ 0.25
KNDC1-201ENST00000304613 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
KNDC1-201ENST00000304613 CKAP2LQ8IYA6 745 aa16.64■□□□□ 0.25
KNDC1-201ENST00000304613 VPS36Q86VN1 386 aa16.64■□□□□ 0.25
KNDC1-201ENST00000304613 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.25
KNDC1-201ENST00000304613 TMEM266Q2M3C6 531 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 TMEM87AQ8NBN3 555 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 DNAI2Q9GZS0 605 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 PPFIA3O75145 1194 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 SSRP1Q08945 709 aaKnown RBP16.63■□□□□ 0.25
KNDC1-201ENST00000304613 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 KCNH5Q8NCM2 988 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 TRMT1Q9NXH9 659 aaKnown RBP16.63■□□□□ 0.25
KNDC1-201ENST00000304613 NESP48681 1621 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 SLC5A1P13866 664 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 CCDC194A0A1B0GVG4 234 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 USP8P40818 1118 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 CCDC61Q9Y6R9 512 aa16.63■□□□□ 0.25
KNDC1-201ENST00000304613 GOLGA8AA7E2F4 631 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 GOLGA8BA8MQT2 603 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 ZSCAN12O43309 604 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 PRKCSHP14314 528 aaPredicted RBP16.62■□□□□ 0.25
KNDC1-201ENST00000304613 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 RAB34Q9BZG1 259 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 CTNNA2P26232 953 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 CCDC150Q8NCX0 1101 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 HECW1Q76N89 1606 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 C6orf229H3BNL8 230 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 BIN1O00499 593 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 SLFN5Q08AF3 891 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 PANK2Q9BZ23 570 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 WDHD1O75717 1129 aaPredicted RBP16.62■□□□□ 0.25
KNDC1-201ENST00000304613 TCERG1LQ5VWI1 586 aa16.62■□□□□ 0.25
KNDC1-201ENST00000304613 HOOK3Q86VS8 718 aa16.61■□□□□ 0.25
KNDC1-201ENST00000304613 CLIP2Q9UDT6 1046 aa16.61■□□□□ 0.25
KNDC1-201ENST00000304613 CCDC183Q5T5S1 534 aa16.61■□□□□ 0.25
KNDC1-201ENST00000304613 ISM2Q6H9L7 571 aa16.61■□□□□ 0.25
KNDC1-201ENST00000304613 RAB11FIP4Q86YS3 637 aa16.61■□□□□ 0.25
KNDC1-201ENST00000304613 COMMD10Q9Y6G5 202 aa16.61■□□□□ 0.25
KNDC1-201ENST00000304613 GBP3Q9H0R5 595 aa16.61■□□□□ 0.25
KNDC1-201ENST00000304613 ZBTB3Q9H5J0 574 aa16.6■□□□□ 0.25
KNDC1-201ENST00000304613 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
KNDC1-201ENST00000304613 SSH1Q8WYL5 1049 aa16.6■□□□□ 0.25
KNDC1-201ENST00000304613 SCAND2PQ9GZW5 306 aaPredicted RBP16.6■□□□□ 0.25
KNDC1-201ENST00000304613 ANKRD18BA2A2Z9 1011 aa16.6■□□□□ 0.25
KNDC1-201ENST00000304613 IDEP14735 1019 aa16.6■□□□□ 0.25
KNDC1-201ENST00000304613 MTIF2P46199 727 aaKnown RBP16.6■□□□□ 0.25
KNDC1-201ENST00000304613 FEZ1Q99689 392 aa16.6■□□□□ 0.25
KNDC1-201ENST00000304613 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
KNDC1-201ENST00000304613 FGFR1OPO95684 399 aaKnown RBP16.6■□□□□ 0.25
KNDC1-201ENST00000304613 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
KNDC1-201ENST00000304613 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
KNDC1-201ENST00000304613 A0A087WZG4 1122 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 TMCO5BA8MYB1 307 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 PRPF4BQ13523 1007 aaKnown RBP16.59■□□□□ 0.25
KNDC1-201ENST00000304613 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 KIF18AQ8NI77 898 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 GDPD2Q9HCC8 539 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
KNDC1-201ENST00000304613 SPECC1Q5M775 1068 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 PHAXQ9H814 394 aaKnown RBP16.59■□□□□ 0.25
KNDC1-201ENST00000304613 PAFAH1B1P43034 410 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 USO1O60763 962 aaKnown RBP16.59■□□□□ 0.25
KNDC1-201ENST00000304613 NF2P35240 595 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 FERMT2Q96AC1 680 aa16.59■□□□□ 0.25
KNDC1-201ENST00000304613 PUF60Q9UHX1 559 aaKnown RBP16.58■□□□□ 0.25
KNDC1-201ENST00000304613 SAMM50Q9Y512 469 aa16.58■□□□□ 0.25
KNDC1-201ENST00000304613 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.24
KNDC1-201ENST00000304613 HAND2P61296 217 aa16.58■□□□□ 0.24
KNDC1-201ENST00000304613 HLTFQ14527 1009 aaKnown RBP eCLIP16.58■□□□□ 0.24
KNDC1-201ENST00000304613 MAP9Q49MG5 647 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms