RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 STX6O43752 255 aa24.56■■□□□ 1.52
LETM1-201ENST00000302787 KIAA1328Q86T90 577 aa24.56■■□□□ 1.52
LETM1-201ENST00000302787 NUTM2AQ8IVF1 878 aaPredicted RBP24.56■■□□□ 1.52
LETM1-201ENST00000302787 FBXO3Q9UK99 471 aa24.56■■□□□ 1.52
LETM1-201ENST00000302787 NAPBQ9H115 298 aa24.56■■□□□ 1.52
LETM1-201ENST00000302787 PTPRKQ15262 1439 aa24.56■■□□□ 1.52
LETM1-201ENST00000302787 BICDL1Q6ZP65 573 aa24.56■■□□□ 1.52
LETM1-201ENST00000302787 ZSCAN12O43309 604 aa24.55■■□□□ 1.52
LETM1-201ENST00000302787 DDX19AQ9NUU7 478 aaKnown RBP24.55■■□□□ 1.52
LETM1-201ENST00000302787 PHF8Q9UPP1 1060 aa24.55■■□□□ 1.52
LETM1-201ENST00000302787 ASXL1Q8IXJ9 1541 aa24.55■■□□□ 1.52
LETM1-201ENST00000302787 TMOD3Q9NYL9 352 aa24.55■■□□□ 1.52
LETM1-201ENST00000302787 FAM193AP78312 1265 aa24.55■■□□□ 1.52
LETM1-201ENST00000302787 TSHZ3Q63HK5 1081 aa24.55■■□□□ 1.52
LETM1-201ENST00000302787 AMOTL2Q9Y2J4 779 aa24.55■■□□□ 1.52
LETM1-201ENST00000302787 PCDHB15Q9Y5E8 787 aa24.54■■□□□ 1.52
LETM1-201ENST00000302787 MINDY4BA8MYZ0 360 aa24.54■■□□□ 1.52
LETM1-201ENST00000302787 ARHGAP45Q92619 1136 aa24.54■■□□□ 1.52
LETM1-201ENST00000302787 MAP3K2Q9Y2U5 619 aa24.54■■□□□ 1.52
LETM1-201ENST00000302787 GPATCH8Q9UKJ3 1502 aaKnown RBP24.54■■□□□ 1.52
LETM1-201ENST00000302787 IFIT5Q13325 482 aaKnown RBP24.54■■□□□ 1.52
LETM1-201ENST00000302787 CCDC196A0A1B0GTZ2 297 aa24.53■■□□□ 1.52
LETM1-201ENST00000302787 ZNF213O14771 459 aa24.53■■□□□ 1.52
LETM1-201ENST00000302787 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
LETM1-201ENST00000302787 RBM5P52756 815 aaKnown RBP eCLIP24.53■■□□□ 1.52
LETM1-201ENST00000302787 KLHL40Q2TBA0 621 aa24.53■■□□□ 1.52
LETM1-201ENST00000302787 KIF18AQ8NI77 898 aa24.53■■□□□ 1.52
LETM1-201ENST00000302787 CNKSR2Q8WXI2 1034 aa24.53■■□□□ 1.52
LETM1-201ENST00000302787 PPP1R42Q7Z4L9 355 aa24.53■■□□□ 1.52
LETM1-201ENST00000302787 CCDC102AQ96A19 550 aa24.52■■□□□ 1.52
LETM1-201ENST00000302787 RBM27Q9P2N5 1060 aaKnown RBP24.52■■□□□ 1.52
LETM1-201ENST00000302787 PIK3R4Q99570 1358 aa24.52■■□□□ 1.52
LETM1-201ENST00000302787 A0A087WZG4 1122 aa24.52■■□□□ 1.52
LETM1-201ENST00000302787 KIAA0754O94854 1291 aa24.52■■□□□ 1.52
LETM1-201ENST00000302787 CCT2P78371 535 aaKnown RBP24.52■■□□□ 1.52
LETM1-201ENST00000302787 TMCO3Q6UWJ1 677 aa24.52■■□□□ 1.52
LETM1-201ENST00000302787 CCDC148Q8NFR7 591 aa24.52■■□□□ 1.52
LETM1-201ENST00000302787 TOP1P11387 765 aaKnown RBP24.51■■□□□ 1.51
LETM1-201ENST00000302787 GOLGA8BA8MQT2 603 aa24.51■■□□□ 1.51
LETM1-201ENST00000302787 KLHL10Q6JEL2 608 aa24.51■■□□□ 1.51
LETM1-201ENST00000302787 FSIP1Q8NA03 581 aa24.51■■□□□ 1.51
LETM1-201ENST00000302787 CENPHQ9H3R5 247 aa24.51■■□□□ 1.51
LETM1-201ENST00000302787 MAP3K12Q12852 859 aa24.51■■□□□ 1.51
LETM1-201ENST00000302787 TFIP11Q9UBB9 837 aaKnown RBP24.51■■□□□ 1.51
LETM1-201ENST00000302787 SLC12A7Q9Y666 1083 aa24.51■■□□□ 1.51
LETM1-201ENST00000302787 ZNF397Q8NF99 534 aaPredicted RBP24.5■■□□□ 1.51
LETM1-201ENST00000302787 USP5P45974 858 aa24.5■■□□□ 1.51
LETM1-201ENST00000302787 SEPT11Q9NVA2 429 aaKnown RBP24.5■■□□□ 1.51
LETM1-201ENST00000302787 UGGT2Q9NYU1 1516 aa24.5■■□□□ 1.51
LETM1-201ENST00000302787 PARD3Q8TEW0 1356 aa24.49■■□□□ 1.51
LETM1-201ENST00000302787 ADCY5O95622 1261 aa24.49■■□□□ 1.51
LETM1-201ENST00000302787 CAVIN4Q5BKX8 364 aa24.49■■□□□ 1.51
LETM1-201ENST00000302787 PKNOX2Q96KN3 472 aa24.49■■□□□ 1.51
LETM1-201ENST00000302787 ZSCAN29Q8IWY8 852 aaPredicted RBP24.49■■□□□ 1.51
LETM1-201ENST00000302787 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
LETM1-201ENST00000302787 SDSP20132 328 aa24.49■■□□□ 1.51
LETM1-201ENST00000302787 FANCAO15360 1455 aa24.49■■□□□ 1.51
LETM1-201ENST00000302787 ZSCAN23Q3MJ62 389 aa24.48■■□□□ 1.51
LETM1-201ENST00000302787 PHAXQ9H814 394 aaKnown RBP24.48■■□□□ 1.51
LETM1-201ENST00000302787 PI4KAP2A4QPH2 592 aa24.48■■□□□ 1.51
LETM1-201ENST00000302787 PI4KAP1Q8N8J0 262 aa24.48■■□□□ 1.51
LETM1-201ENST00000302787 CASQ1P31415 396 aa24.48■■□□□ 1.51
LETM1-201ENST00000302787 SSRP1Q08945 709 aaKnown RBP24.48■■□□□ 1.51
LETM1-201ENST00000302787 TAF4BQ92750 862 aa24.48■■□□□ 1.51
LETM1-201ENST00000302787 GOLGA8AA7E2F4 631 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 TNNT1P13805 278 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 UBE2HP62256 183 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 TMX3Q96JJ7 454 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 ZNF76P36508 570 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 CCDC82Q8N4S0 544 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 URI1O94763 535 aaPredicted RBP24.47■■□□□ 1.51
LETM1-201ENST00000302787 GOLIM4O00461 696 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 MCM5P33992 734 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 CNNM3Q8NE01 707 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 ZNF652Q9Y2D9 606 aa24.47■■□□□ 1.51
LETM1-201ENST00000302787 KIF5CO60282 957 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 STX1AQ16623 288 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 CTCFLQ8NI51 663 aaPredicted RBP24.46■■□□□ 1.51
LETM1-201ENST00000302787 ZNF287Q9HBT7 754 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 NEMFO60524 1076 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 SLC5A1P13866 664 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 C8orf34Q49A92 452 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 GBP3Q9H0R5 595 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 ERICH4A6NGS2 130 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 NEFHP12036 1026 aa24.46■■□□□ 1.51
LETM1-201ENST00000302787 SEC63Q9UGP8 760 aaKnown RBP24.46■■□□□ 1.51
LETM1-201ENST00000302787 MEIS3Q99687 375 aa24.45■■□□□ 1.51
LETM1-201ENST00000302787 TRMT112Q9UI30 125 aaKnown RBP24.45■■□□□ 1.51
LETM1-201ENST00000302787 IFIT3O14879 490 aaKnown RBP24.45■■□□□ 1.5
LETM1-201ENST00000302787 FOXO3O43524 673 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 FBLN1P23142 703 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 ANKRD18BA2A2Z9 1011 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 UVSSAQ2YD98 709 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 HSP90AB3PQ58FF7 597 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 WWC2Q6AWC2 1192 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 NEK1Q96PY6 1258 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 MKNK2Q9HBH9 465 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 PRAG1Q86YV5 1406 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 NUP160Q12769 1436 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 SPA17Q15506 151 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms