RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PDCP20941 246 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 CCDC183Q5T5S1 534 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 RALYLQ86SE5 291 aaKnown RBP15.8■□□□□ 0.12
CASC4-201ENST00000299957 LRRIQ1Q96JM4 1722 aa15.8■□□□□ 0.12
CASC4-201ENST00000299957 MAP3K19Q56UN5 1328 aa15.79■□□□□ 0.12
CASC4-201ENST00000299957 KDM5DQ9BY66 1539 aa15.79■□□□□ 0.12
CASC4-201ENST00000299957 MAP3K11Q16584 847 aa15.79■□□□□ 0.12
CASC4-201ENST00000299957 CHST3Q7LGC8 479 aa15.79■□□□□ 0.12
CASC4-201ENST00000299957 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
CASC4-201ENST00000299957 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.79■□□□□ 0.12
CASC4-201ENST00000299957 NSFL1CQ9UNZ2 370 aaKnown RBP15.79■□□□□ 0.12
CASC4-201ENST00000299957 V9GYY5 206 aaPredicted RBP15.79■□□□□ 0.12
CASC4-201ENST00000299957 HAND2P61296 217 aa15.78■□□□□ 0.12
CASC4-201ENST00000299957 DDX46Q7L014 1031 aaKnown RBP15.78■□□□□ 0.12
CASC4-201ENST00000299957 NBPF7P0C2Y1 421 aaPredicted RBP15.78■□□□□ 0.12
CASC4-201ENST00000299957 STK38Q15208 465 aa15.78■□□□□ 0.12
CASC4-201ENST00000299957 STRN4Q9NRL3 753 aa15.78■□□□□ 0.12
CASC4-201ENST00000299957 ZKSCAN5Q9Y2L8 839 aa15.77■□□□□ 0.12
CASC4-201ENST00000299957 EIF2AK4Q9P2K8 1649 aaKnown RBP15.77■□□□□ 0.12
CASC4-201ENST00000299957 SAMD9LQ8IVG5 1584 aa15.77■□□□□ 0.12
CASC4-201ENST00000299957 TMX1Q9H3N1 280 aa15.77■□□□□ 0.12
CASC4-201ENST00000299957 ECHDC1Q9NTX5 307 aa15.77■□□□□ 0.12
CASC4-201ENST00000299957 ATP8B2P98198 1209 aa15.77■□□□□ 0.11
CASC4-201ENST00000299957 TRDNQ13061 729 aa15.77■□□□□ 0.11
CASC4-201ENST00000299957 SKIDA1Q1XH10 827 aa15.77■□□□□ 0.11
CASC4-201ENST00000299957 HSP90AA4PQ58FG1 418 aa15.77■□□□□ 0.11
CASC4-201ENST00000299957 KAT6BQ8WYB5 2073 aa15.77■□□□□ 0.11
CASC4-201ENST00000299957 SYT1P21579 422 aa15.76■□□□□ 0.11
CASC4-201ENST00000299957 EVA1CP58658 441 aa15.76■□□□□ 0.11
CASC4-201ENST00000299957 UBE3BQ7Z3V4 1068 aa15.76■□□□□ 0.11
CASC4-201ENST00000299957 GPT2Q8TD30 523 aa15.76■□□□□ 0.11
CASC4-201ENST00000299957 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.76■□□□□ 0.113e-6■■□□□ 12.1
CASC4-201ENST00000299957 FSD2A1L4K1 749 aa15.76■□□□□ 0.11
CASC4-201ENST00000299957 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
CASC4-201ENST00000299957 ZSCAN22P10073 491 aaPredicted RBP15.76■□□□□ 0.11
CASC4-201ENST00000299957 EDC3Q96F86 508 aaKnown RBP15.76■□□□□ 0.11
CASC4-201ENST00000299957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.116e-7■■□□□ 12.8
CASC4-201ENST00000299957 GTF2E1P29083 439 aaPredicted RBP15.75■□□□□ 0.11
CASC4-201ENST00000299957 HMGN5P82970 282 aaKnown RBP15.75■□□□□ 0.11
CASC4-201ENST00000299957 PDCL3Q9H2J4 239 aa15.75■□□□□ 0.11
CASC4-201ENST00000299957 DACT1Q9NYF0 836 aa15.75■□□□□ 0.11
CASC4-201ENST00000299957 MAST1Q9Y2H9 1570 aa15.75■□□□□ 0.11
CASC4-201ENST00000299957 LGR6Q9HBX8 967 aa15.75■□□□□ 0.11
CASC4-201ENST00000299957 RBM8AQ9Y5S9 174 aaKnown RBP15.75■□□□□ 0.11
CASC4-201ENST00000299957 CCDC112Q8NEF3 446 aa15.74■□□□□ 0.11
CASC4-201ENST00000299957 PIBF1Q8WXW3 757 aa15.74■□□□□ 0.11
CASC4-201ENST00000299957 NPATQ14207 1427 aa15.74■□□□□ 0.11
CASC4-201ENST00000299957 CHL1O00533 1208 aa15.74■□□□□ 0.11
CASC4-201ENST00000299957 POLR3DP05423 398 aaPredicted RBP15.74■□□□□ 0.11
CASC4-201ENST00000299957 PDCL2Q8N4E4 241 aa15.74■□□□□ 0.11
CASC4-201ENST00000299957 LUZP1Q86V48 1076 aa15.74■□□□□ 0.11
CASC4-201ENST00000299957 BRF1Q92994 677 aa15.74■□□□□ 0.11
CASC4-201ENST00000299957 YTHDC2Q9H6S0 1430 aaKnown RBP15.74■□□□□ 0.11
CASC4-201ENST00000299957 KCNQ3O43525 872 aa15.73■□□□□ 0.11
CASC4-201ENST00000299957 NOLC1Q14978 699 aaKnown RBP eCLIP15.73■□□□□ 0.11
CASC4-201ENST00000299957 HSP90AB3PQ58FF7 597 aa15.73■□□□□ 0.11
CASC4-201ENST00000299957 CCDC186Q7Z3E2 898 aa15.73■□□□□ 0.11
CASC4-201ENST00000299957 ERCC4Q92889 916 aaPredicted RBP15.73■□□□□ 0.11
CASC4-201ENST00000299957 LETM1O95202 739 aaPredicted RBP15.73■□□□□ 0.11
CASC4-201ENST00000299957 PDE4CQ08493 712 aa15.73■□□□□ 0.11
CASC4-201ENST00000299957 CHRNA2Q15822 529 aa15.73■□□□□ 0.11
CASC4-201ENST00000299957 ERC1Q8IUD2 1116 aa15.73■□□□□ 0.11
CASC4-201ENST00000299957 CCDC144CPQ8IYA2 1237 aa15.73■□□□□ 0.11
CASC4-201ENST00000299957 ZBTB3Q9H5J0 574 aa15.73■□□□□ 0.11
CASC4-201ENST00000299957 GOLIM4O00461 696 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 OFD1O75665 1012 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 ZNF165P49910 485 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 TRIM29Q14134 588 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 PPP4R3BQ5MIZ7 849 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 PROSER2Q86WR7 435 aaPredicted RBP15.72■□□□□ 0.11
CASC4-201ENST00000299957 TRERF1Q96PN7 1200 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 ERICH4A6NGS2 130 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 CPLX2Q6PUV4 134 aaKnown RBP15.72■□□□□ 0.11
CASC4-201ENST00000299957 FAM227BQ96M60 508 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 MAP7D2Q96T17 732 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
CASC4-201ENST00000299957 A0A087WZG4 1122 aa15.71■□□□□ 0.11
CASC4-201ENST00000299957 UBE2HP62256 183 aa15.71■□□□□ 0.11
CASC4-201ENST00000299957 DNAJC25Q9H1X3 360 aa15.71■□□□□ 0.11
CASC4-201ENST00000299957 DBF4Q9UBU7 674 aaPredicted RBP15.71■□□□□ 0.11
CASC4-201ENST00000299957 MNS1Q8NEH6 495 aa15.71■□□□□ 0.11
CASC4-201ENST00000299957 RIMS2Q9UQ26 1411 aa15.71■□□□□ 0.1
CASC4-201ENST00000299957 CABP4P57796 275 aa15.7■□□□□ 0.1
CASC4-201ENST00000299957 CLIP2Q9UDT6 1046 aa15.7■□□□□ 0.1
CASC4-201ENST00000299957 F13A1P00488 732 aa15.7■□□□□ 0.1
CASC4-201ENST00000299957 PTGS1P23219 599 aa15.7■□□□□ 0.1
CASC4-201ENST00000299957 ANO6Q4KMQ2 910 aa15.7■□□□□ 0.1
CASC4-201ENST00000299957 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
CASC4-201ENST00000299957 PHF8Q9UPP1 1060 aa15.7■□□□□ 0.1
CASC4-201ENST00000299957 NMIQ13287 307 aaPredicted RBP15.7■□□□□ 0.1
CASC4-201ENST00000299957 ZSCAN31Q96LW9 406 aaPredicted RBP15.7■□□□□ 0.1
CASC4-201ENST00000299957 ADGBQ8N7X0 1667 aa15.7■□□□□ 0.1
CASC4-201ENST00000299957 ABCC4O15439 1325 aa15.69■□□□□ 0.1
CASC4-201ENST00000299957 TNNT1P13805 278 aa15.69■□□□□ 0.1
CASC4-201ENST00000299957 TTC37Q6PGP7 1564 aa15.69■□□□□ 0.1
CASC4-201ENST00000299957 IDH1O75874 414 aaKnown RBP15.69■□□□□ 0.1
CASC4-201ENST00000299957 ZNF518AQ6AHZ1 1483 aa15.69■□□□□ 0.1
CASC4-201ENST00000299957 SERPINC1P01008 464 aa15.69■□□□□ 0.1
CASC4-201ENST00000299957 AKAP17AQ02040 695 aaKnown RBP15.69■□□□□ 0.1
CASC4-201ENST00000299957 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms