RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 CACNA1FO60840 1977 aa14.48□□□□□ -0.09
RHO-201ENST00000296271 TRAK2O60296 914 aa14.48□□□□□ -0.09
RHO-201ENST00000296271 ATF3P18847 181 aa14.48□□□□□ -0.09
RHO-201ENST00000296271 AMOTQ4VCS5 1084 aa14.48□□□□□ -0.09
RHO-201ENST00000296271 ZGPATQ8N5A5 531 aaKnown RBP14.48□□□□□ -0.09
RHO-201ENST00000296271 NFATC2IPQ8NCF5 419 aa14.48□□□□□ -0.09
RHO-201ENST00000296271 JARID2Q92833 1246 aaPredicted RBP14.48□□□□□ -0.09
RHO-201ENST00000296271 LMO7Q8WWI1 1683 aa14.48□□□□□ -0.09
RHO-201ENST00000296271 STRCP1A6NGW2 1772 aa14.48□□□□□ -0.09
RHO-201ENST00000296271 ERC2O15083 957 aa14.47□□□□□ -0.09
RHO-201ENST00000296271 NOL8Q76FK4 1167 aaKnown RBP14.47□□□□□ -0.09
RHO-201ENST00000296271 MYL6BP14649 208 aa14.47□□□□□ -0.09
RHO-201ENST00000296271 RHPN1Q8TCX5 695 aa14.46□□□□□ -0.09
RHO-201ENST00000296271 CSB-PGBD3P0DP91 1061 aa14.46□□□□□ -0.09
RHO-201ENST00000296271 CHMLP26374 656 aa14.46□□□□□ -0.09
RHO-201ENST00000296271 POLA2Q14181 598 aa14.46□□□□□ -0.09
RHO-201ENST00000296271 RAB3GAP1Q15042 981 aa14.46□□□□□ -0.09
RHO-201ENST00000296271 ESYT1Q9BSJ8 1104 aa14.46□□□□□ -0.09
RHO-201ENST00000296271 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.09
RHO-201ENST00000296271 MST1RQ04912 1400 aa14.46□□□□□ -0.1
RHO-201ENST00000296271 PHRF1Q9P1Y6 1649 aaKnown RBP14.45□□□□□ -0.1
RHO-201ENST00000296271 PDIA6Q15084 440 aa14.45□□□□□ -0.1
RHO-201ENST00000296271 RABEP1Q15276 862 aa14.45□□□□□ -0.1
RHO-201ENST00000296271 CASC1Q6TDU7 716 aa14.45□□□□□ -0.1
RHO-201ENST00000296271 ANO2Q9NQ90 1003 aa14.45□□□□□ -0.1
RHO-201ENST00000296271 MEGF6O75095 1541 aa14.45□□□□□ -0.1
RHO-201ENST00000296271 RAPGEF4Q8WZA2 1011 aa14.44□□□□□ -0.1
RHO-201ENST00000296271 KDM6AO15550 1401 aaPredicted RBP14.44□□□□□ -0.1
RHO-201ENST00000296271 NCAPD2Q15021 1401 aa14.44□□□□□ -0.1
RHO-201ENST00000296271 DTNBO60941 627 aa14.44□□□□□ -0.1
RHO-201ENST00000296271 KLHDC4Q8TBB5 520 aa14.44□□□□□ -0.1
RHO-201ENST00000296271 PXDNLA1KZ92 1463 aa14.44□□□□□ -0.1
RHO-201ENST00000296271 FOXD4L5Q5VV16 416 aaPredicted RBP14.43□□□□□ -0.1
RHO-201ENST00000296271 PI4K2BQ8TCG2 481 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 FOXD4L4Q8WXT5 416 aaPredicted RBP14.43□□□□□ -0.1
RHO-201ENST00000296271 KAZALD1Q96I82 304 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 ZNF496Q96IT1 587 aaPredicted RBP14.43□□□□□ -0.1
RHO-201ENST00000296271 C9orf78Q9NZ63 289 aaPredicted RBP14.43□□□□□ -0.1
RHO-201ENST00000296271 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 CYP27B1O15528 508 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 REC8O95072 547 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 HOXB7P09629 217 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 ZNF790Q6PG37 636 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 PANK2Q9BZ23 570 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 STAP2Q9UGK3 403 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 USP16Q9Y5T5 823 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 HEG1Q9ULI3 1381 aa14.43□□□□□ -0.1
RHO-201ENST00000296271 NEK4P51957 841 aa14.42□□□□□ -0.1
RHO-201ENST00000296271 UPF3BQ9BZI7 483 aaKnown RBP14.42□□□□□ -0.1
RHO-201ENST00000296271 NPHP3Q7Z494 1330 aa14.42□□□□□ -0.1
RHO-201ENST00000296271 PHKG2P15735 406 aa14.42□□□□□ -0.1
RHO-201ENST00000296271 KSR2Q6VAB6 950 aa14.42□□□□□ -0.1
RHO-201ENST00000296271 SUCLG2Q96I99 432 aa14.42□□□□□ -0.1
RHO-201ENST00000296271 ALS2Q96Q42 1657 aa14.42□□□□□ -0.1
RHO-201ENST00000296271 N4BP2Q86UW6 1770 aaPredicted RBP14.42□□□□□ -0.1
RHO-201ENST00000296271 OS9Q13438 667 aaPredicted RBP14.41□□□□□ -0.1
RHO-201ENST00000296271 LARP6Q9BRS8 491 aaKnown RBP14.41□□□□□ -0.1
RHO-201ENST00000296271 SLC52A2Q9HAB3 445 aa14.41□□□□□ -0.1
RHO-201ENST00000296271 IGKV5-2P06315 115 aa14.4□□□□□ -0.1
RHO-201ENST00000296271 SIL1Q9H173 461 aa14.4□□□□□ -0.1
RHO-201ENST00000296271 TATP17735 454 aaPredicted RBP14.4□□□□□ -0.1
RHO-201ENST00000296271 XAGE3Q8WTP9 111 aa14.4□□□□□ -0.1
RHO-201ENST00000296271 BICC1Q9H694 974 aaKnown RBP14.4□□□□□ -0.1
RHO-201ENST00000296271 COPS6Q7L5N1 327 aa14.39□□□□□ -0.11
RHO-201ENST00000296271 XRCC6P12956 609 aaKnown RBP eCLIP14.39□□□□□ -0.11
RHO-201ENST00000296271 EPHA10Q5JZY3 1008 aa14.39□□□□□ -0.11
RHO-201ENST00000296271 KIF1BPQ96EK5 621 aa14.39□□□□□ -0.11
RHO-201ENST00000296271 CIZ1Q9ULV3 898 aaPredicted RBP14.39□□□□□ -0.11
RHO-201ENST00000296271 RIC3Q7Z5B4 369 aa14.38□□□□□ -0.11
RHO-201ENST00000296271 DDX21Q9NR30 783 aaKnown RBP eCLIP14.38□□□□□ -0.11
RHO-201ENST00000296271 SPG7Q9UQ90 795 aa14.38□□□□□ -0.11
RHO-201ENST00000296271 ZDHHC9Q9Y397 364 aa14.38□□□□□ -0.11
RHO-201ENST00000296271 SIPA1L3O60292 1781 aaPredicted RBP14.38□□□□□ -0.11
RHO-201ENST00000296271 C5P01031 1676 aa14.38□□□□□ -0.11
RHO-201ENST00000296271 CWC27Q6UX04 472 aaKnown RBP14.38□□□□□ -0.11
RHO-201ENST00000296271 TLR7Q9NYK1 1049 aaKnown RBP14.38□□□□□ -0.11
RHO-201ENST00000296271 CAMTA1Q9Y6Y1 1673 aa14.38□□□□□ -0.11
RHO-201ENST00000296271 CPA1P15085 419 aa14.37□□□□□ -0.11
RHO-201ENST00000296271 GAS2L3Q86XJ1 694 aa14.37□□□□□ -0.11
RHO-201ENST00000296271 MYD88Q99836 296 aa14.37□□□□□ -0.11
RHO-201ENST00000296271 GRM8O00222 908 aa14.37□□□□□ -0.11
RHO-201ENST00000296271 ST18O60284 1047 aa14.37□□□□□ -0.11
RHO-201ENST00000296271 RAB11FIP3O75154 756 aa14.37□□□□□ -0.11
RHO-201ENST00000296271 BAG4O95429 457 aaKnown RBP14.37□□□□□ -0.11
RHO-201ENST00000296271 DDX54Q8TDD1 881 aaKnown RBP14.37□□□□□ -0.11
RHO-201ENST00000296271 TMX3Q96JJ7 454 aa14.37□□□□□ -0.11
RHO-201ENST00000296271 CCDC8Q9H0W5 538 aaPredicted RBP14.37□□□□□ -0.11
RHO-201ENST00000296271 HYPKQ9NX55 129 aa14.37□□□□□ -0.11
RHO-201ENST00000296271 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 ATP5J2-PTCD1G3V325 749 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 PTCD1O75127 700 aaKnown RBP14.36□□□□□ -0.11
RHO-201ENST00000296271 SASH1O94885 1247 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 KIF1AQ12756 1690 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 COL18A1P39060 1754 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 MCTP1Q6DN14 999 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 BRINP3Q76B58 766 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 IFNL2Q8IZJ0 200 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 SPATA31A3Q5VYP0 1347 aa14.36□□□□□ -0.11
RHO-201ENST00000296271 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
RHO-201ENST00000296271 COL9A3Q14050 684 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms