RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 PHRF1Q9P1Y6 1649 aaKnown RBP18.7■□□□□ 0.58
LRRTM1-201ENST00000295057 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
LRRTM1-201ENST00000295057 AKAP4Q5JQC9 854 aa18.7■□□□□ 0.58
LRRTM1-201ENST00000295057 CHAMP1Q96JM3 812 aa18.7■□□□□ 0.58
LRRTM1-201ENST00000295057 CEMIPQ8WUJ3 1361 aa18.7■□□□□ 0.58
LRRTM1-201ENST00000295057 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
LRRTM1-201ENST00000295057 PDLIM2Q96JY6 352 aa18.7■□□□□ 0.58
LRRTM1-201ENST00000295057 ZNF500O60304 480 aaPredicted RBP18.69■□□□□ 0.58
LRRTM1-201ENST00000295057 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
LRRTM1-201ENST00000295057 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
LRRTM1-201ENST00000295057 INTS3Q68E01 1043 aaKnown RBP18.69■□□□□ 0.58
LRRTM1-201ENST00000295057 MEIS3Q99687 375 aa18.69■□□□□ 0.58
LRRTM1-201ENST00000295057 TEFQ10587 303 aa18.68■□□□□ 0.58
LRRTM1-201ENST00000295057 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
LRRTM1-201ENST00000295057 GCC1Q96CN9 775 aa18.68■□□□□ 0.58
LRRTM1-201ENST00000295057 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
LRRTM1-201ENST00000295057 BTBD11A6QL63 1104 aa18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 GSPT1P15170 499 aaKnown RBP18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 HS1BP3Q53T59 392 aa18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 SMAP1Q8IYB5 467 aaPredicted RBP18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 GPT2Q8TD30 523 aa18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 PTPRCP08575 1304 aa18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 PRPF40AO75400 957 aaKnown RBP18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 CYP2E1P05181 493 aaPredicted RBP18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 AMOTQ4VCS5 1084 aa18.67■□□□□ 0.58
LRRTM1-201ENST00000295057 CDC45O75419 566 aa18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 ANXA1P04083 346 aa18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 FLIIQ13045 1269 aa18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 PHAXQ9H814 394 aaKnown RBP18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 FGD1P98174 961 aa18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 HDGFL1Q5TGJ6 251 aa18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 CCDC30Q5VVM6 783 aa18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
LRRTM1-201ENST00000295057 PRAMEF22A3QJZ6 481 aa18.65■□□□□ 0.58
LRRTM1-201ENST00000295057 ZGPATQ8N5A5 531 aaKnown RBP18.65■□□□□ 0.58
LRRTM1-201ENST00000295057 RAPGEF4Q8WZA2 1011 aa18.65■□□□□ 0.58
LRRTM1-201ENST00000295057 ZKSCAN5Q9Y2L8 839 aa18.65■□□□□ 0.58
LRRTM1-201ENST00000295057 NUCB2P80303 420 aa18.64■□□□□ 0.57
LRRTM1-201ENST00000295057 NSFL1CQ9UNZ2 370 aaKnown RBP18.64■□□□□ 0.57
LRRTM1-201ENST00000295057 RABEP1Q15276 862 aa18.63■□□□□ 0.57
LRRTM1-201ENST00000295057 TMEM63CQ9P1W3 806 aa18.62■□□□□ 0.57
LRRTM1-201ENST00000295057 ZDHHC9Q9Y397 364 aa18.62■□□□□ 0.57
LRRTM1-201ENST00000295057 MEGF6O75095 1541 aa18.62■□□□□ 0.57
LRRTM1-201ENST00000295057 SYCE3A1L190 88 aa18.62■□□□□ 0.57
LRRTM1-201ENST00000295057 CHPF2Q9P2E5 772 aa18.62■□□□□ 0.57
LRRTM1-201ENST00000295057 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
LRRTM1-201ENST00000295057 MTERF4Q7Z6M4 381 aaKnown RBP18.61■□□□□ 0.57
LRRTM1-201ENST00000295057 CHMP4BQ9H444 224 aaKnown RBP18.61■□□□□ 0.57
LRRTM1-201ENST00000295057 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
LRRTM1-201ENST00000295057 BABAM1Q9NWV8 329 aa18.61■□□□□ 0.57
LRRTM1-201ENST00000295057 SOS2Q07890 1332 aaPredicted RBP18.61■□□□□ 0.57
LRRTM1-201ENST00000295057 APBB1O00213 710 aa18.61■□□□□ 0.57
LRRTM1-201ENST00000295057 TATP17735 454 aaPredicted RBP18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 FOXD4L5Q5VV16 416 aaPredicted RBP18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 PLEKHM2Q8IWE5 1019 aa18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 C16orf71Q8IYS4 520 aaPredicted RBP18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 RNF214Q8ND24 703 aa18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 FOXD4L4Q8WXT5 416 aaPredicted RBP18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 COL18A1P39060 1754 aa18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 CEP85Q6P2H3 762 aa18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 USP26Q9BXU7 913 aa18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 PRDM10Q9NQV6 1147 aa18.6■□□□□ 0.57
LRRTM1-201ENST00000295057 LTBP4Q8N2S1 1624 aa18.59■□□□□ 0.57
LRRTM1-201ENST00000295057 LMO7Q8WWI1 1683 aa18.59■□□□□ 0.57
LRRTM1-201ENST00000295057 ATP10DQ9P241 1426 aa18.58■□□□□ 0.57
LRRTM1-201ENST00000295057 LRSAM1Q6UWE0 723 aa18.58■□□□□ 0.57
LRRTM1-201ENST00000295057 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.57
LRRTM1-201ENST00000295057 DYNC1I1O14576 645 aa18.58■□□□□ 0.56
LRRTM1-201ENST00000295057 PHKG2P15735 406 aa18.58■□□□□ 0.56
LRRTM1-201ENST00000295057 PROSER3Q2NL68 480 aa18.58■□□□□ 0.56
LRRTM1-201ENST00000295057 NFATC2IPQ8NCF5 419 aa18.58■□□□□ 0.56
LRRTM1-201ENST00000295057 CAMTA1Q9Y6Y1 1673 aa18.57■□□□□ 0.56
LRRTM1-201ENST00000295057 CYP27B1O15528 508 aa18.57■□□□□ 0.56
LRRTM1-201ENST00000295057 ANKRD44Q8N8A2 993 aa18.57■□□□□ 0.56
LRRTM1-201ENST00000295057 OTUD7AQ8TE49 926 aaPredicted RBP18.57■□□□□ 0.56
LRRTM1-201ENST00000295057 CCT4P50991 539 aaKnown RBP18.56■□□□□ 0.56
LRRTM1-201ENST00000295057 CSPP1Q1MSJ5 1256 aa18.56■□□□□ 0.56
LRRTM1-201ENST00000295057 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
LRRTM1-201ENST00000295057 STRN4Q9NRL3 753 aa18.56■□□□□ 0.56
LRRTM1-201ENST00000295057 FAM208AQ9UK61 1670 aaKnown RBP18.56■□□□□ 0.56
LRRTM1-201ENST00000295057 KDM6AO15550 1401 aaPredicted RBP18.56■□□□□ 0.56
LRRTM1-201ENST00000295057 SASS6Q6UVJ0 657 aa18.56■□□□□ 0.56
LRRTM1-201ENST00000295057 CPDO75976 1380 aa18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 SMARCA5O60264 1052 aaPredicted RBP18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 TTC22Q5TAA0 569 aa18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 TOM1L2Q6ZVM7 507 aa18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 CCDC39Q9UFE4 941 aa18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 ZHX1Q9UKY1 873 aaPredicted RBP18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 GIGYF1O75420 1035 aaPredicted RBP18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 DCTPP1Q9H773 170 aa18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 SPG7Q9UQ90 795 aa18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
LRRTM1-201ENST00000295057 MPNDQ8N594 471 aa18.54■□□□□ 0.56
LRRTM1-201ENST00000295057 CWC22Q9HCG8 908 aaKnown RBP18.54■□□□□ 0.56
LRRTM1-201ENST00000295057 MCM5P33992 734 aa18.53■□□□□ 0.56
LRRTM1-201ENST00000295057 KDM3BQ7LBC6 1761 aa18.53■□□□□ 0.56
LRRTM1-201ENST00000295057 PI4KAP2A4QPH2 592 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms