RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
LRTOMT-201ENST00000289488 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.25□□□□□ -0.45
LRTOMT-201ENST00000289488 HEG1Q9ULI3 1381 aa12.25□□□□□ -0.45
LRTOMT-201ENST00000289488 THSD7AQ9UPZ6 1657 aa12.25□□□□□ -0.45
LRTOMT-201ENST00000289488 FAM43AQ8N2R8 423 aa12.25□□□□□ -0.45
LRTOMT-201ENST00000289488 ZNF428Q96B54 188 aa12.25□□□□□ -0.45
LRTOMT-201ENST00000289488 ZKSCAN2Q63HK3 967 aa12.24□□□□□ -0.45
LRTOMT-201ENST00000289488 ATF7IPQ6VMQ6 1270 aa12.24□□□□□ -0.45
LRTOMT-201ENST00000289488 SEPT12Q8IYM1 358 aa12.24□□□□□ -0.45
LRTOMT-201ENST00000289488 CHPF2Q9P2E5 772 aa12.24□□□□□ -0.45
LRTOMT-201ENST00000289488 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
LRTOMT-201ENST00000289488 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
LRTOMT-201ENST00000289488 PROSER3Q2NL68 480 aa12.23□□□□□ -0.45
LRTOMT-201ENST00000289488 PHAXQ9H814 394 aaKnown RBP12.23□□□□□ -0.45
LRTOMT-201ENST00000289488 BCL9O00512 1426 aa12.23□□□□□ -0.45
LRTOMT-201ENST00000289488 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
LRTOMT-201ENST00000289488 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
LRTOMT-201ENST00000289488 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
LRTOMT-201ENST00000289488 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
LRTOMT-201ENST00000289488 CCDC30Q5VVM6 783 aa12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 FTSJ3Q8IY81 847 aaKnown RBP12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 RGS17Q9UGC6 210 aaPredicted RBP12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 FMNL2Q96PY5 1086 aa12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 STK31Q9BXU1 1019 aa12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 CACNA1FO60840 1977 aa12.22□□□□□ -0.45
LRTOMT-201ENST00000289488 F6X3S4 739 aa12.21□□□□□ -0.45
LRTOMT-201ENST00000289488 BRPF1P55201 1214 aaPredicted RBP12.21□□□□□ -0.45
LRTOMT-201ENST00000289488 DZIP1LQ8IYY4 767 aaKnown RBP12.21□□□□□ -0.45
LRTOMT-201ENST00000289488 PDE3AQ14432 1141 aa12.21□□□□□ -0.46
LRTOMT-201ENST00000289488 TMEM57Q8N5G2 664 aa12.21□□□□□ -0.46
LRTOMT-201ENST00000289488 SLC4A9Q96Q91 983 aa12.21□□□□□ -0.46
LRTOMT-201ENST00000289488 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.46
LRTOMT-201ENST00000289488 GOLGB1Q14789 3259 aaKnown RBP12.2□□□□□ -0.46
LRTOMT-201ENST00000289488 SNRPA1P09661 255 aaKnown RBP12.2□□□□□ -0.46
LRTOMT-201ENST00000289488 MYL6BP14649 208 aa12.2□□□□□ -0.46
LRTOMT-201ENST00000289488 KDM2BQ8NHM5 1336 aa12.2□□□□□ -0.46
LRTOMT-201ENST00000289488 RGS12O14924 1447 aa12.2□□□□□ -0.46
LRTOMT-201ENST00000289488 FLIIQ13045 1269 aa12.2□□□□□ -0.46
LRTOMT-201ENST00000289488 PDIA6Q15084 440 aa12.2□□□□□ -0.46
LRTOMT-201ENST00000289488 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
LRTOMT-201ENST00000289488 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
LRTOMT-201ENST00000289488 HOXB7P09629 217 aa12.19□□□□□ -0.46
LRTOMT-201ENST00000289488 SLC4A3P48751 1232 aa12.19□□□□□ -0.46
LRTOMT-201ENST00000289488 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
LRTOMT-201ENST00000289488 KCNQ4P56696 695 aa12.19□□□□□ -0.46
LRTOMT-201ENST00000289488 FKBP5Q13451 457 aaPredicted RBP12.19□□□□□ -0.46
LRTOMT-201ENST00000289488 A1BGP04217 495 aa12.18□□□□□ -0.46
LRTOMT-201ENST00000289488 POTEAQ6S8J7 498 aa12.18□□□□□ -0.46
LRTOMT-201ENST00000289488 SKAP1Q86WV1 359 aa12.18□□□□□ -0.46
LRTOMT-201ENST00000289488 SBF2Q86WG5 1849 aa12.18□□□□□ -0.46
LRTOMT-201ENST00000289488 AIMP1Q12904 312 aaKnown RBP12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 MVPQ14764 893 aaKnown RBP12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 SLC4A10Q6U841 1118 aa12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 ARHGAP45Q92619 1136 aa12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 DBF4Q9UBU7 674 aaPredicted RBP12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 CENPQQ7L2Z9 268 aaPredicted RBP12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 SOS1Q07889 1333 aaPredicted RBP12.17□□□□□ -0.46
LRTOMT-201ENST00000289488 ABCC4O15439 1325 aa12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 C8orf34Q49A92 452 aa12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 NBPF14Q5TI25 921 aa12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 NBPF15Q8N660 670 aa12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 FRAT2O75474 233 aaPredicted RBP12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 BTAF1O14981 1849 aa12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 LAMB4A4D0S4 1761 aa12.16□□□□□ -0.46
LRTOMT-201ENST00000289488 PTPRCP08575 1304 aa12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 PI4KAP2A4QPH2 592 aa12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 KRT27Q7Z3Y8 459 aa12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 LRP10Q7Z4F1 713 aa12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 PI4KAP1Q8N8J0 262 aa12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 DDX21Q9NR30 783 aaKnown RBP eCLIP12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 RXRBP28702 533 aa12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
LRTOMT-201ENST00000289488 SRCAPQ6ZRS2 3230 aa12.15□□□□□ -0.47
LRTOMT-201ENST00000289488 PALLDQ8WX93 1383 aa12.14□□□□□ -0.47
LRTOMT-201ENST00000289488 C1orf115Q9H7X2 142 aa12.14□□□□□ -0.47
LRTOMT-201ENST00000289488 LOC102724428A0A0B4J2F2 783 aa12.14□□□□□ -0.47
LRTOMT-201ENST00000289488 SIK1P57059 783 aa12.14□□□□□ -0.47
LRTOMT-201ENST00000289488 COPS6Q7L5N1 327 aa12.14□□□□□ -0.47
LRTOMT-201ENST00000289488 XAGE3Q8WTP9 111 aa12.14□□□□□ -0.47
LRTOMT-201ENST00000289488 ADCY9O60503 1353 aa12.13□□□□□ -0.47
LRTOMT-201ENST00000289488 MYH14Q7Z406 1995 aaKnown RBP12.13□□□□□ -0.47
LRTOMT-201ENST00000289488 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
LRTOMT-201ENST00000289488 ITPK1Q13572 414 aa12.13□□□□□ -0.47
LRTOMT-201ENST00000289488 TJP1Q07157 1748 aa12.13□□□□□ -0.47
LRTOMT-201ENST00000289488 HYPKQ9NX55 129 aa12.12□□□□□ -0.47
LRTOMT-201ENST00000289488 PCDHB15Q9Y5E8 787 aa12.12□□□□□ -0.47
LRTOMT-201ENST00000289488 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
LRTOMT-201ENST00000289488 ZBTB7BO15156 539 aaPredicted RBP12.12□□□□□ -0.47
LRTOMT-201ENST00000289488 TRIM37O94972 964 aa12.12□□□□□ -0.47
LRTOMT-201ENST00000289488 DDX19BQ9UMR2 479 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms