RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PRIM1P49642 420 aaKnown RBP14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 RUFY1Q96T51 708 aa14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 ACBD3Q9H3P7 528 aa14.86□□□□□ -0.03
SLC6A1-201ENST00000287766 CPA1P15085 419 aa14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 NECAB1Q8N987 351 aa14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 TFIP11Q9UBB9 837 aaKnown RBP14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 GSPT1P15170 499 aaKnown RBP14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 RDXP35241 583 aaKnown RBP14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 MYD88Q99836 296 aa14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 KRT85P78386 507 aa14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 TSPYL1Q9H0U9 437 aa14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 TRPM2O94759 1503 aa14.85□□□□□ -0.03
SLC6A1-201ENST00000287766 SYNMO15061 1565 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 PDCP20941 246 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 FKBP4Q02790 459 aaKnown RBP eCLIP14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 ANKLE2Q86XL3 938 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 SBNO2Q9Y2G9 1366 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 ATP2B1P20020 1258 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 GTF2E1P29083 439 aaPredicted RBP14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 CABP4P57796 275 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 FAM177A1Q8N128 213 aaPredicted RBP14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 RALYLQ86SE5 291 aaKnown RBP14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 UHRF1BP1LA0JNW5 1464 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 ATP5J2-PTCD1G3V325 749 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 SLC39A6Q13433 755 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 NFXL1Q6ZNB6 911 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 DHX37Q8IY37 1157 aaKnown RBP14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 PCMTD1Q96MG8 357 aaPredicted RBP14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 TNMDQ9H2S6 317 aa14.84□□□□□ -0.03
SLC6A1-201ENST00000287766 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
SLC6A1-201ENST00000287766 ATP8B2P98198 1209 aa14.83□□□□□ -0.04
SLC6A1-201ENST00000287766 TRDNQ13061 729 aa14.83□□□□□ -0.04
SLC6A1-201ENST00000287766 PKP1Q13835 747 aa14.83□□□□□ -0.04
SLC6A1-201ENST00000287766 ZNF830Q96NB3 372 aaPredicted RBP14.83□□□□□ -0.04
SLC6A1-201ENST00000287766 LIMCH1Q9UPQ0 1083 aa14.83□□□□□ -0.04
SLC6A1-201ENST00000287766 CKAP2LQ8IYA6 745 aa14.83□□□□□ -0.04
SLC6A1-201ENST00000287766 CHL1O00533 1208 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 SMC2O95347 1197 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 AXDND1Q5T1B0 1012 aaPredicted RBP14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 FILIP1Q7Z7B0 1213 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 SPATA32Q96LK8 384 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 DBF4Q9UBU7 674 aaPredicted RBP14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 TNRQ92752 1358 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 YEATS2Q9ULM3 1422 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 AK7Q96M32 723 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 HIP1O00291 1037 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 CCDC192P0DO97 292 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 CLCN1P35523 988 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 ZFYVE9O95405 1425 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 HCLS1P14317 486 aaPredicted RBP14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 GUCY1B3Q02153 619 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 CWF19L2Q2TBE0 894 aaKnown RBP14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 ECHDC1Q9NTX5 307 aa14.82□□□□□ -0.04
SLC6A1-201ENST00000287766 POGZQ7Z3K3 1410 aa14.81□□□□□ -0.04
SLC6A1-201ENST00000287766 SYNE3Q6ZMZ3 975 aa14.81□□□□□ -0.04
SLC6A1-201ENST00000287766 CEP89Q96ST8 783 aa14.81□□□□□ -0.04
SLC6A1-201ENST00000287766 CNPY2Q9Y2B0 182 aa14.81□□□□□ -0.04
SLC6A1-201ENST00000287766 GJB2P29033 226 aa14.81□□□□□ -0.04
SLC6A1-201ENST00000287766 ANTXR1Q9H6X2 564 aa14.81□□□□□ -0.04
SLC6A1-201ENST00000287766 STX6O43752 255 aa14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 ME1P48163 572 aa14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 GIMAP6Q6P9H5 292 aa14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 CPLX2Q6PUV4 134 aaKnown RBP14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 SIRT2Q8IXJ6 389 aa14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 ADCY10Q96PN6 1610 aa14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 CHMLP26374 656 aa14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 KINO60870 393 aaKnown RBP14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 TOM1L2Q6ZVM7 507 aa14.8□□□□□ -0.04
SLC6A1-201ENST00000287766 PLCD4Q9BRC7 762 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 LRRC2Q9BYS8 371 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 NUP62CLQ9H1M0 184 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 DEF6Q9H4E7 631 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 PIK3R4Q99570 1358 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 LETM1O95202 739 aaPredicted RBP14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 PPP4R3BQ5MIZ7 849 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 TAF3Q5VWG9 929 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 USP48Q86UV5 1035 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 CLTCL1P53675 1640 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 GAS2L3Q86XJ1 694 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 CDC42BPBQ9Y5S2 1711 aa14.79□□□□□ -0.04
SLC6A1-201ENST00000287766 IGSF3O75054 1194 aa14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 CHRNA2Q15822 529 aa14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 UBE3BQ7Z3V4 1068 aa14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 CROCC2H7BZ55 1655 aa14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 TRIM29Q14134 588 aa14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 KCNH5Q8NCM2 988 aa14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 LRRFIP1Q32MZ4 808 aaKnown RBP14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 RRP12Q5JTH9 1297 aaKnown RBP14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 ZSCAN31Q96LW9 406 aaPredicted RBP14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 NAT10Q9H0A0 1025 aaKnown RBP14.78□□□□□ -0.04
SLC6A1-201ENST00000287766 KCNA6P17658 529 aa14.77□□□□□ -0.04
SLC6A1-201ENST00000287766 ZMYM3Q14202 1370 aa14.77□□□□□ -0.04
SLC6A1-201ENST00000287766 IQGAP3Q86VI3 1631 aa14.77□□□□□ -0.04
SLC6A1-201ENST00000287766 ABCC4O15439 1325 aa14.77□□□□□ -0.04
SLC6A1-201ENST00000287766 LGR6Q9HBX8 967 aa14.77□□□□□ -0.04
SLC6A1-201ENST00000287766 A0A087WZG4 1122 aa14.77□□□□□ -0.05
SLC6A1-201ENST00000287766 CCT2P78371 535 aaKnown RBP14.77□□□□□ -0.05
SLC6A1-201ENST00000287766 CCDC183Q5T5S1 534 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms