RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 ITSN1Q15811 1721 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 APBA3O96018 575 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
EPHA4-201ENST00000281821 PLBD2Q8NHP8 589 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 RNF20Q5VTR2 975 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 CCDC191Q8NCU4 936 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 SSH1Q8WYL5 1049 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 DIAPH3Q9NSV4 1193 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 NOB1Q9ULX3 412 aaKnown RBP9.51□□□□□ -0.89
EPHA4-201ENST00000281821 SPATA31A5Q5VU36 1347 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 SPATA31A7Q8IWB4 1347 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 KDRP35968 1356 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 NWD1Q149M9 1564 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 SURF6O75683 361 aaKnown RBP9.51□□□□□ -0.89
EPHA4-201ENST00000281821 DZIP3Q86Y13 1208 aaKnown RBP9.51□□□□□ -0.89
EPHA4-201ENST00000281821 UTP14AQ9BVJ6 771 aaKnown RBP9.51□□□□□ -0.89
EPHA4-201ENST00000281821 FBXO3Q9UK99 471 aa9.51□□□□□ -0.89
EPHA4-201ENST00000281821 SPATA31A1Q5TZJ5 1347 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 GRIPAP1Q4V328 841 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 EYA3Q99504 573 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 CC2D2BQ6DHV5 1058 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 PHACTR3Q96KR7 559 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 ANP32EQ9BTT0 268 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 RGS3P49796 1198 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 ANKRD2Q9GZV1 360 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 SH3TC1Q8TE82 1336 aa9.5□□□□□ -0.89
EPHA4-201ENST00000281821 SUPT20HQ8NEM7 779 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 KIF1BPQ96EK5 621 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 ABCC6O95255 1503 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 LDHCP07864 332 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 SLC3A2P08195 630 aaKnown RBP9.49□□□□□ -0.89
EPHA4-201ENST00000281821 DCTN1Q14203 1278 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 CAVIN4Q5BKX8 364 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
EPHA4-201ENST00000281821 KNDC1Q76NI1 1749 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 CPLX2Q6PUV4 134 aaKnown RBP9.49□□□□□ -0.89
EPHA4-201ENST00000281821 CLEC4GQ6UXB4 293 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 THUMPD2Q9BTF0 503 aaKnown RBP9.49□□□□□ -0.89
EPHA4-201ENST00000281821 TMOD2Q9NZR1 351 aa9.49□□□□□ -0.89
EPHA4-201ENST00000281821 LOC102724428A0A0B4J2F2 783 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 GNPATO15228 680 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 ZKSCAN1P17029 563 aaPredicted RBP9.48□□□□□ -0.89
EPHA4-201ENST00000281821 SIK1P57059 783 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 ACSBG1Q96GR2 724 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 ERVV-1B6SEH8 477 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 ANKRD45Q5TZF3 282 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 XAGE3Q8WTP9 111 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 CDCA7LQ96GN5 454 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 IGSF3O75054 1194 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 NKX1-1Q15270 411 aaPredicted RBP9.48□□□□□ -0.89
EPHA4-201ENST00000281821 EIF4A1P60842 406 aaKnown RBP9.48□□□□□ -0.89
EPHA4-201ENST00000281821 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 MYD88Q99836 296 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 UQCRFS1P1P0C7P4 283 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 SPTY2D1Q68D10 685 aaPredicted RBP9.48□□□□□ -0.89
EPHA4-201ENST00000281821 LRRCC1Q9C099 1032 aa9.48□□□□□ -0.89
EPHA4-201ENST00000281821 GOLGA6L22H0YM25 854 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 SRGAP3O43295 1099 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 VAMP4O75379 141 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 BRPF1P55201 1214 aaPredicted RBP9.47□□□□□ -0.89
EPHA4-201ENST00000281821 COPS6Q7L5N1 327 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 ZGPATQ8N5A5 531 aaKnown RBP9.47□□□□□ -0.89
EPHA4-201ENST00000281821 SLC5A1P13866 664 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 KLHL34Q8N239 644 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 IRX6P78412 446 aaPredicted RBP9.47□□□□□ -0.89
EPHA4-201ENST00000281821 PDE6BP35913 854 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 RC3H1Q5TC82 1133 aaKnown RBP9.47□□□□□ -0.89
EPHA4-201ENST00000281821 CNTROBQ8N137 903 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 PI4KAP2A4QPH2 592 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 PI4KAP1Q8N8J0 262 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 CNBD1Q8NA66 436 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 ZNF496Q96IT1 587 aaPredicted RBP9.47□□□□□ -0.89
EPHA4-201ENST00000281821 CRBNQ96SW2 442 aa9.47□□□□□ -0.89
EPHA4-201ENST00000281821 NACAP1Q9BZK3 213 aa9.46□□□□□ -0.89
EPHA4-201ENST00000281821 ZNF287Q9HBT7 754 aa9.46□□□□□ -0.89
EPHA4-201ENST00000281821 NIP7Q9Y221 180 aaKnown RBP eCLIP9.46□□□□□ -0.89
EPHA4-201ENST00000281821 IL15P40933 162 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-201ENST00000281821 NEUROD6Q96NK8 337 aa9.46□□□□□ -0.9
EPHA4-201ENST00000281821 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-201ENST00000281821 TRDNQ13061 729 aa9.46□□□□□ -0.9
EPHA4-201ENST00000281821 GRM8O00222 908 aa9.46□□□□□ -0.9
EPHA4-201ENST00000281821 FBLN1P23142 703 aa9.46□□□□□ -0.9
EPHA4-201ENST00000281821 PPP4R3BQ5MIZ7 849 aa9.46□□□□□ -0.9
EPHA4-201ENST00000281821 ANKRD18AQ8IVF6 992 aa9.46□□□□□ -0.9
EPHA4-201ENST00000281821 METTL22Q9BUU2 404 aaPredicted RBP9.46□□□□□ -0.9
EPHA4-201ENST00000281821 ZBTB3Q9H5J0 574 aa9.46□□□□□ -0.9
EPHA4-201ENST00000281821 MAP3K2Q9Y2U5 619 aa9.46□□□□□ -0.9
EPHA4-201ENST00000281821 TMED8Q6PL24 325 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-201ENST00000281821 APBB1O00213 710 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 ALDH1B1P30837 517 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 TTF1Q15361 905 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-201ENST00000281821 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
EPHA4-201ENST00000281821 IL17REQ8NFR9 667 aa9.45□□□□□ -0.9
EPHA4-201ENST00000281821 RBM17Q96I25 401 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms