RNA–Protein interactions for RNA: ENST00000279387.11

PPP4C-201, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-201ENST00000279387 PRAMEF22A3QJZ6 481 aa31.92■■■□□ 2.7
PPP4C-201ENST00000279387 FHDC1Q9C0D6 1143 aaPredicted RBP31.92■■■□□ 2.7
PPP4C-201ENST00000279387 ZBTB1Q9Y2K1 713 aa31.91■■■□□ 2.7
PPP4C-201ENST00000279387 KDM3BQ7LBC6 1761 aa31.9■■■□□ 2.7
PPP4C-201ENST00000279387 CANXP27824 592 aaKnown RBP31.89■■■□□ 2.7
PPP4C-201ENST00000279387 RFC4P35249 363 aa31.88■■■□□ 2.69
PPP4C-201ENST00000279387 SRP68Q9UHB9 627 aaKnown RBP31.88■■■□□ 2.69
PPP4C-201ENST00000279387 APAF1O14727 1248 aa31.86■■■□□ 2.69
PPP4C-201ENST00000279387 STARD3NLO95772 234 aa31.85■■■□□ 2.69
PPP4C-201ENST00000279387 ADRA2BP18089 450 aa31.85■■■□□ 2.69
PPP4C-201ENST00000279387 TRIM35Q9UPQ4 493 aa31.85■■■□□ 2.69
PPP4C-201ENST00000279387 USP16Q9Y5T5 823 aa31.85■■■□□ 2.69
PPP4C-201ENST00000279387 SOS1Q07889 1333 aaPredicted RBP31.85■■■□□ 2.69
PPP4C-201ENST00000279387 A1BGP04217 495 aa31.84■■■□□ 2.69
PPP4C-201ENST00000279387 PIP4K2AP48426 406 aaPredicted RBP31.84■■■□□ 2.69
PPP4C-201ENST00000279387 LMOD3Q0VAK6 560 aa31.83■■■□□ 2.69
PPP4C-201ENST00000279387 ZNF330Q9Y3S2 320 aaPredicted RBP31.83■■■□□ 2.69
PPP4C-201ENST00000279387 PNISRQ8TF01 805 aaKnown RBP31.83■■■□□ 2.69
PPP4C-201ENST00000279387 SYT17Q9BSW7 474 aa31.83■■■□□ 2.69
PPP4C-201ENST00000279387 COL15A1P39059 1388 aa31.81■■■□□ 2.68
PPP4C-201ENST00000279387 GYS1P13807 737 aa31.81■■■□□ 2.68
PPP4C-201ENST00000279387 TEX13AQ9BXU3 409 aaPredicted RBP31.81■■■□□ 2.68
PPP4C-201ENST00000279387 TSPYL4Q9UJ04 414 aa31.81■■■□□ 2.68
PPP4C-201ENST00000279387 LAS1LQ9Y4W2 734 aaKnown RBP31.81■■■□□ 2.68
PPP4C-201ENST00000279387 SNRPA1P09661 255 aaKnown RBP31.8■■■□□ 2.68
PPP4C-201ENST00000279387 MMP10P09238 476 aa31.78■■■□□ 2.68
PPP4C-201ENST00000279387 USP42Q9H9J4 1324 aaKnown RBP31.78■■■□□ 2.68
PPP4C-201ENST00000279387 EIF4A1P60842 406 aaKnown RBP31.77■■■□□ 2.68
PPP4C-201ENST00000279387 USPL1Q5W0Q7 1092 aa31.77■■■□□ 2.68
PPP4C-201ENST00000279387 FKBP8Q14318 412 aa31.76■■■□□ 2.68
PPP4C-201ENST00000279387 NLGN2Q8NFZ4 835 aa31.75■■■□□ 2.67
PPP4C-201ENST00000279387 ZPR1O75312 459 aa31.75■■■□□ 2.67
PPP4C-201ENST00000279387 EIF5P55010 431 aaKnown RBP31.75■■■□□ 2.67
PPP4C-201ENST00000279387 LAMB4A4D0S4 1761 aa31.74■■■□□ 2.67
PPP4C-201ENST00000279387 NLGN1Q8N2Q7 840 aa31.74■■■□□ 2.67
PPP4C-201ENST00000279387 FAM9BQ8IZU0 186 aa31.73■■■□□ 2.67
PPP4C-201ENST00000279387 GIGYF1O75420 1035 aaPredicted RBP31.72■■■□□ 2.67
PPP4C-201ENST00000279387 TBC1D2BQ9UPU7 963 aa31.72■■■□□ 2.67
PPP4C-201ENST00000279387 NARFQ9UHQ1 456 aa31.71■■■□□ 2.67
PPP4C-201ENST00000279387 NBPF26B4DH59 902 aa31.68■■■□□ 2.66
PPP4C-201ENST00000279387 IL6STP40189 918 aaPredicted RBP31.68■■■□□ 2.66
PPP4C-201ENST00000279387 KRT24Q2M2I5 525 aa31.68■■■□□ 2.66
PPP4C-201ENST00000279387 NBPF10Q6P3W6 841 aaKnown RBP31.68■■■□□ 2.66
PPP4C-201ENST00000279387 NBPF15Q8N660 670 aa31.68■■■□□ 2.66
PPP4C-201ENST00000279387 BCL2L12Q9HB09 334 aa31.68■■■□□ 2.66
PPP4C-201ENST00000279387 CHL1O00533 1208 aa31.66■■■□□ 2.66
PPP4C-201ENST00000279387 SALL2Q9Y467 1007 aaPredicted RBP31.66■■■□□ 2.66
PPP4C-201ENST00000279387 DDR1Q08345 913 aa31.66■■■□□ 2.66
PPP4C-201ENST00000279387 NPM2Q86SE8 214 aaKnown RBP31.66■■■□□ 2.66
PPP4C-201ENST00000279387 PARP3Q9Y6F1 533 aa31.66■■■□□ 2.66
PPP4C-201ENST00000279387 A0A087WZG4 1122 aa31.65■■■□□ 2.66
PPP4C-201ENST00000279387 NGEFQ8N5V2 710 aa31.65■■■□□ 2.66
PPP4C-201ENST00000279387 SCN7AQ01118 1682 aa31.64■■■□□ 2.66
PPP4C-201ENST00000279387 BICDL1Q6ZP65 573 aa31.64■■■□□ 2.66
PPP4C-201ENST00000279387 PELP1Q8IZL8 1130 aaKnown RBP31.64■■■□□ 2.66
PPP4C-201ENST00000279387 WWC3Q9ULE0 1092 aa31.64■■■□□ 2.66
PPP4C-201ENST00000279387 EIF2S2P20042 333 aaKnown RBP31.63■■■□□ 2.65
PPP4C-201ENST00000279387 DZIP3Q86Y13 1208 aaKnown RBP31.63■■■□□ 2.65
PPP4C-201ENST00000279387 NECTIN2Q92692 538 aa31.63■■■□□ 2.65
PPP4C-201ENST00000279387 BABAM1Q9NWV8 329 aa31.63■■■□□ 2.65
PPP4C-201ENST00000279387 MYL6BP14649 208 aa31.61■■■□□ 2.65
PPP4C-201ENST00000279387 NFIXQ14938 502 aa31.61■■■□□ 2.65
PPP4C-201ENST00000279387 MBIPQ9NS73 344 aa31.61■■■□□ 2.65
PPP4C-201ENST00000279387 CD2APQ9Y5K6 639 aa31.61■■■□□ 2.65
PPP4C-201ENST00000279387 GOLGB1Q14789 3259 aaKnown RBP31.6■■■□□ 2.65
PPP4C-201ENST00000279387 TM4SF1P30408 202 aa31.6■■■□□ 2.65
PPP4C-201ENST00000279387 CFAP44Q96MT7 982 aa31.6■■■□□ 2.65
PPP4C-201ENST00000279387 BCORQ6W2J9 1755 aa31.6■■■□□ 2.65
PPP4C-201ENST00000279387 POLRMTO00411 1230 aaKnown RBP31.59■■■□□ 2.65
PPP4C-201ENST00000279387 AFDNP55196 1824 aaKnown RBP31.59■■■□□ 2.65
PPP4C-201ENST00000279387 CAMTA2O94983 1202 aa31.58■■■□□ 2.65
PPP4C-201ENST00000279387 TBC1D9BQ66K14 1250 aa31.58■■■□□ 2.65
PPP4C-201ENST00000279387 N4BP2Q86UW6 1770 aaPredicted RBP31.58■■■□□ 2.65
PPP4C-201ENST00000279387 DCAF8L1A6NGE4 600 aa31.58■■■□□ 2.65
PPP4C-201ENST00000279387 KIF13BQ9NQT8 1826 aa31.57■■■□□ 2.64
PPP4C-201ENST00000279387 ANXA1P04083 346 aa31.57■■■□□ 2.64
PPP4C-201ENST00000279387 ZNF853P0CG23 659 aa31.56■■■□□ 2.64
PPP4C-201ENST00000279387 GPR162Q16538 588 aa31.56■■■□□ 2.64
PPP4C-201ENST00000279387 UTRNP46939 3433 aa31.56■■■□□ 2.64
PPP4C-201ENST00000279387 C10orf71Q711Q0 1435 aa31.55■■■□□ 2.64
PPP4C-201ENST00000279387 WWC1Q8IX03 1113 aa31.55■■■□□ 2.64
PPP4C-201ENST00000279387 IFT57Q9NWB7 429 aa31.55■■■□□ 2.64
PPP4C-201ENST00000279387 GNAI1P63096 354 aa31.54■■■□□ 2.64
PPP4C-201ENST00000279387 CALD1Q05682 793 aaKnown RBP31.53■■■□□ 2.64
PPP4C-201ENST00000279387 PROSER3Q2NL68 480 aa31.53■■■□□ 2.64
PPP4C-201ENST00000279387 KIAA1551Q9HCM1 1747 aa31.53■■■□□ 2.64
PPP4C-201ENST00000279387 TTLL7Q6ZT98 887 aa31.52■■■□□ 2.64
PPP4C-201ENST00000279387 ELL2O00472 640 aaPredicted RBP31.51■■■□□ 2.64
PPP4C-201ENST00000279387 SERPINB2P05120 415 aa31.51■■■□□ 2.64
PPP4C-201ENST00000279387 TSR2Q969E8 191 aaKnown RBP31.51■■■□□ 2.64
PPP4C-201ENST00000279387 A0A0G2JLW4 131 aa31.5■■■□□ 2.63
PPP4C-201ENST00000279387 YBX3P16989 372 aaKnown RBP eCLIP31.5■■■□□ 2.635e-9■■□□□ 12.8
PPP4C-201ENST00000279387 PDIA6Q15084 440 aa31.5■■■□□ 2.63
PPP4C-201ENST00000279387 DIEXFQ68CQ4 756 aaKnown RBP31.5■■■□□ 2.63
PPP4C-201ENST00000279387 PXDNLA1KZ92 1463 aa31.5■■■□□ 2.63
PPP4C-201ENST00000279387 HLFQ16534 295 aa31.49■■■□□ 2.63
PPP4C-201ENST00000279387 CCDC27Q2M243 656 aa31.49■■■□□ 2.63
PPP4C-201ENST00000279387 DUSP27Q5VZP5 1158 aa31.49■■■□□ 2.63
PPP4C-201ENST00000279387 CCDC24Q8N4L8 307 aa31.49■■■□□ 2.63
PPP4C-201ENST00000279387 NRXN2Q9P2S2 1712 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms