RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 DDB1Q16531 1140 aa14.83□□□□□ -0.04
SSRP1-201ENST00000278412 INTS3Q68E01 1043 aaKnown RBP14.83□□□□□ -0.04
SSRP1-201ENST00000278412 ADCY9O60503 1353 aa14.82□□□□□ -0.04
SSRP1-201ENST00000278412 ITGB4P16144 1822 aa14.82□□□□□ -0.04
SSRP1-201ENST00000278412 WNK3Q9BYP7 1800 aa14.82□□□□□ -0.04
SSRP1-201ENST00000278412 A1BGP04217 495 aa14.82□□□□□ -0.04
SSRP1-201ENST00000278412 CENPQQ7L2Z9 268 aaPredicted RBP14.82□□□□□ -0.04
SSRP1-201ENST00000278412 SLC4A9Q96Q91 983 aa14.82□□□□□ -0.04
SSRP1-201ENST00000278412 TMOD3Q9NYL9 352 aa14.82□□□□□ -0.04
SSRP1-201ENST00000278412 PTPRCP08575 1304 aa14.82□□□□□ -0.04
SSRP1-201ENST00000278412 MEX3CQ5U5Q3 659 aaKnown RBP14.82□□□□□ -0.04
SSRP1-201ENST00000278412 NBPF26B4DH59 902 aa14.81□□□□□ -0.04
SSRP1-201ENST00000278412 KCNQ4P56696 695 aa14.81□□□□□ -0.04
SSRP1-201ENST00000278412 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
SSRP1-201ENST00000278412 NBPF10Q6P3W6 841 aaKnown RBP14.81□□□□□ -0.04
SSRP1-201ENST00000278412 NBPF15Q8N660 670 aa14.81□□□□□ -0.04
SSRP1-201ENST00000278412 ATG3Q9NT62 314 aa14.81□□□□□ -0.04
SSRP1-201ENST00000278412 ERVV-2B6SEH9 535 aa14.81□□□□□ -0.04
SSRP1-201ENST00000278412 KCPQ6ZWJ8 1503 aa14.81□□□□□ -0.04
SSRP1-201ENST00000278412 MS4A1P11836 297 aa14.8□□□□□ -0.04
SSRP1-201ENST00000278412 JARID2Q92833 1246 aaPredicted RBP14.8□□□□□ -0.04
SSRP1-201ENST00000278412 FMNL2Q96PY5 1086 aa14.8□□□□□ -0.04
SSRP1-201ENST00000278412 TNS2Q63HR2 1409 aa14.8□□□□□ -0.04
SSRP1-201ENST00000278412 CWF19L2Q2TBE0 894 aaKnown RBP14.8□□□□□ -0.04
SSRP1-201ENST00000278412 LRP10Q7Z4F1 713 aa14.8□□□□□ -0.04
SSRP1-201ENST00000278412 FNBP4Q8N3X1 1017 aaPredicted RBP14.8□□□□□ -0.04
SSRP1-201ENST00000278412 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
SSRP1-201ENST00000278412 AFF2P51816 1311 aa14.8□□□□□ -0.04
SSRP1-201ENST00000278412 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
SSRP1-201ENST00000278412 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
SSRP1-201ENST00000278412 XAGE3Q8WTP9 111 aa14.79□□□□□ -0.04
SSRP1-201ENST00000278412 PDZRN3Q9UPQ7 1066 aa14.79□□□□□ -0.04
SSRP1-201ENST00000278412 MAP3K2Q9Y2U5 619 aa14.79□□□□□ -0.04
SSRP1-201ENST00000278412 ZNF330Q9Y3S2 320 aaPredicted RBP14.79□□□□□ -0.04
SSRP1-201ENST00000278412 DOT1LQ8TEK3 1739 aa14.79□□□□□ -0.04
SSRP1-201ENST00000278412 NWD2Q9ULI1 1742 aa14.79□□□□□ -0.04
SSRP1-201ENST00000278412 COPS6Q7L5N1 327 aa14.79□□□□□ -0.04
SSRP1-201ENST00000278412 HOXB7P09629 217 aa14.78□□□□□ -0.04
SSRP1-201ENST00000278412 DNAJC10Q8IXB1 793 aa14.78□□□□□ -0.04
SSRP1-201ENST00000278412 APBB1O00213 710 aa14.78□□□□□ -0.04
SSRP1-201ENST00000278412 NBPF7P0C2Y1 421 aaPredicted RBP14.78□□□□□ -0.04
SSRP1-201ENST00000278412 CACNA1FO60840 1977 aa14.78□□□□□ -0.04
SSRP1-201ENST00000278412 GOLGB1Q14789 3259 aaKnown RBP14.77□□□□□ -0.04
SSRP1-201ENST00000278412 VPS72Q15906 364 aa14.77□□□□□ -0.04
SSRP1-201ENST00000278412 USP44Q9H0E7 712 aa14.77□□□□□ -0.04
SSRP1-201ENST00000278412 ATP10DQ9P241 1426 aa14.77□□□□□ -0.04
SSRP1-201ENST00000278412 SPATA31A6Q5VVP1 1343 aa14.77□□□□□ -0.04
SSRP1-201ENST00000278412 TTLL7Q6ZT98 887 aa14.77□□□□□ -0.05
SSRP1-201ENST00000278412 DDX21Q9NR30 783 aaKnown RBP eCLIP14.77□□□□□ -0.05
SSRP1-201ENST00000278412 UBR2Q8IWV8 1755 aa14.77□□□□□ -0.05
SSRP1-201ENST00000278412 SMIM5Q71RC9 77 aa14.76□□□□□ -0.05
SSRP1-201ENST00000278412 DNAAF4Q8WXU2 420 aa14.76□□□□□ -0.05
SSRP1-201ENST00000278412 BCL9O00512 1426 aa14.76□□□□□ -0.05
SSRP1-201ENST00000278412 BEND3Q5T5X7 828 aa14.76□□□□□ -0.05
SSRP1-201ENST00000278412 PAPPAQ13219 1627 aa14.76□□□□□ -0.05
SSRP1-201ENST00000278412 PDE4AP27815 886 aa14.75□□□□□ -0.05
SSRP1-201ENST00000278412 CEP85Q6P2H3 762 aa14.75□□□□□ -0.05
SSRP1-201ENST00000278412 BARGINQ6ZT62 677 aa14.75□□□□□ -0.05
SSRP1-201ENST00000278412 RWDD1Q9H446 243 aaPredicted RBP14.75□□□□□ -0.05
SSRP1-201ENST00000278412 LRRFIP2Q9Y608 721 aaKnown RBP14.75□□□□□ -0.05
SSRP1-201ENST00000278412 ATP5J2-PTCD1G3V325 749 aa14.74□□□□□ -0.05
SSRP1-201ENST00000278412 PNMA6EA0A0J9YXQ4 647 aa14.74□□□□□ -0.05
SSRP1-201ENST00000278412 LNPKQ9C0E8 428 aa14.74□□□□□ -0.05
SSRP1-201ENST00000278412 THRAP3Q9Y2W1 955 aaKnown RBP14.74□□□□□ -0.05
SSRP1-201ENST00000278412 PLEKHG2Q9H7P9 1386 aa14.74□□□□□ -0.05
SSRP1-201ENST00000278412 HDAC1Q13547 482 aaPredicted RBP14.74□□□□□ -0.05
SSRP1-201ENST00000278412 RTL5Q5HYW3 569 aaPredicted RBP14.74□□□□□ -0.05
SSRP1-201ENST00000278412 IGKV5-2P06315 115 aa14.73□□□□□ -0.05
SSRP1-201ENST00000278412 CCT4P50991 539 aaKnown RBP14.73□□□□□ -0.05
SSRP1-201ENST00000278412 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
SSRP1-201ENST00000278412 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.73□□□□□ -0.05
SSRP1-201ENST00000278412 ZBTB3Q9H5J0 574 aa14.73□□□□□ -0.05
SSRP1-201ENST00000278412 HYPKQ9NX55 129 aa14.73□□□□□ -0.05
SSRP1-201ENST00000278412 SMARCA5O60264 1052 aaPredicted RBP14.72□□□□□ -0.05
SSRP1-201ENST00000278412 KSR2Q6VAB6 950 aa14.72□□□□□ -0.05
SSRP1-201ENST00000278412 GJD4Q96KN9 370 aaPredicted RBP14.72□□□□□ -0.05
SSRP1-201ENST00000278412 ARXQ96QS3 562 aa14.72□□□□□ -0.05
SSRP1-201ENST00000278412 SRCIN1Q9C0H9 1055 aa14.72□□□□□ -0.05
SSRP1-201ENST00000278412 RIC3Q7Z5B4 369 aa14.72□□□□□ -0.05
SSRP1-201ENST00000278412 MYD88Q99836 296 aa14.72□□□□□ -0.05
SSRP1-201ENST00000278412 RBM19Q9Y4C8 960 aaKnown RBP14.72□□□□□ -0.05
SSRP1-201ENST00000278412 SMC5Q8IY18 1101 aa14.71□□□□□ -0.05
SSRP1-201ENST00000278412 C16orf71Q8IYS4 520 aaPredicted RBP14.71□□□□□ -0.05
SSRP1-201ENST00000278412 OTUD7AQ8TE49 926 aaPredicted RBP14.71□□□□□ -0.05
SSRP1-201ENST00000278412 ANKRD45Q5TZF3 282 aa14.7□□□□□ -0.06
SSRP1-201ENST00000278412 ANKRD44Q8N8A2 993 aa14.7□□□□□ -0.06
SSRP1-201ENST00000278412 EXOC6BQ9Y2D4 811 aa14.7□□□□□ -0.06
SSRP1-201ENST00000278412 ITPK1Q13572 414 aa14.7□□□□□ -0.06
SSRP1-201ENST00000278412 ANKRD13DQ6ZTN6 518 aa14.7□□□□□ -0.06
SSRP1-201ENST00000278412 QTRT2Q9H974 415 aaKnown RBP14.7□□□□□ -0.06
SSRP1-201ENST00000278412 ZBTB1Q9Y2K1 713 aa14.7□□□□□ -0.06
SSRP1-201ENST00000278412 LAMB4A4D0S4 1761 aa14.69□□□□□ -0.06
SSRP1-201ENST00000278412 CDCA7Q9BWT1 371 aaPredicted RBP14.69□□□□□ -0.06
SSRP1-201ENST00000278412 UBTFL1P0CB47 393 aaPredicted RBP14.68□□□□□ -0.06
SSRP1-201ENST00000278412 KAZALD1Q96I82 304 aa14.68□□□□□ -0.06
SSRP1-201ENST00000278412 GNAI2P04899 355 aa14.68□□□□□ -0.06
SSRP1-201ENST00000278412 AAMPQ13685 434 aa14.68□□□□□ -0.06
SSRP1-201ENST00000278412 EPHA10Q5JZY3 1008 aa14.68□□□□□ -0.06
SSRP1-201ENST00000278412 SEPT12Q8IYM1 358 aa14.68□□□□□ -0.06
SSRP1-201ENST00000278412 CYP19A1P11511 503 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms