RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 RIPK4P57078 832 aa17.95■□□□□ 0.46
CT55-201ENST00000276241 MIS18AQ9NYP9 233 aa17.95■□□□□ 0.46
CT55-201ENST00000276241 ADAMTS8Q9UP79 889 aa17.95■□□□□ 0.46
CT55-201ENST00000276241 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
CT55-201ENST00000276241 ANP32CO43423 234 aa17.94■□□□□ 0.46
CT55-201ENST00000276241 STARD3NLO95772 234 aa17.94■□□□□ 0.46
CT55-201ENST00000276241 TAF7Q15545 349 aaPredicted RBP17.94■□□□□ 0.46
CT55-201ENST00000276241 NEUROD2Q15784 382 aa17.94■□□□□ 0.46
CT55-201ENST00000276241 NLGN2Q8NFZ4 835 aa17.94■□□□□ 0.46
CT55-201ENST00000276241 ZNF330Q9Y3S2 320 aaPredicted RBP17.94■□□□□ 0.46
CT55-201ENST00000276241 USP42Q9H9J4 1324 aaKnown RBP17.93■□□□□ 0.46
CT55-201ENST00000276241 MMP10P09238 476 aa17.93■□□□□ 0.46
CT55-201ENST00000276241 GYS1P13807 737 aa17.93■□□□□ 0.46
CT55-201ENST00000276241 TMPOP42166 694 aaKnown RBP17.93■□□□□ 0.46
CT55-201ENST00000276241 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
CT55-201ENST00000276241 PRAMEF22A3QJZ6 481 aa17.92■□□□□ 0.46
CT55-201ENST00000276241 TEX13AQ9BXU3 409 aaPredicted RBP17.92■□□□□ 0.46
CT55-201ENST00000276241 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
CT55-201ENST00000276241 CCDC184Q52MB2 194 aa17.91■□□□□ 0.46
CT55-201ENST00000276241 PELP1Q8IZL8 1130 aaKnown RBP17.91■□□□□ 0.46
CT55-201ENST00000276241 LAMB4A4D0S4 1761 aa17.91■□□□□ 0.46
CT55-201ENST00000276241 ZPR1O75312 459 aa17.9■□□□□ 0.46
CT55-201ENST00000276241 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
CT55-201ENST00000276241 NLGN1Q8N2Q7 840 aa17.9■□□□□ 0.46
CT55-201ENST00000276241 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
CT55-201ENST00000276241 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.46
CT55-201ENST00000276241 FKBP8Q14318 412 aa17.89■□□□□ 0.46
CT55-201ENST00000276241 SCN7AQ01118 1682 aa17.89■□□□□ 0.45
CT55-201ENST00000276241 A1BGP04217 495 aa17.89■□□□□ 0.45
CT55-201ENST00000276241 SNRPA1P09661 255 aaKnown RBP17.89■□□□□ 0.45
CT55-201ENST00000276241 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
CT55-201ENST00000276241 TSPYL4Q9UJ04 414 aa17.88■□□□□ 0.45
CT55-201ENST00000276241 CD2APQ9Y5K6 639 aa17.88■□□□□ 0.45
CT55-201ENST00000276241 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
CT55-201ENST00000276241 GPR162Q16538 588 aa17.87■□□□□ 0.45
CT55-201ENST00000276241 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
CT55-201ENST00000276241 NARFQ9UHQ1 456 aa17.87■□□□□ 0.45
CT55-201ENST00000276241 C10orf71Q711Q0 1435 aa17.86■□□□□ 0.45
CT55-201ENST00000276241 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
CT55-201ENST00000276241 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
CT55-201ENST00000276241 A0A087WZG4 1122 aa17.85■□□□□ 0.45
CT55-201ENST00000276241 IL6STP40189 918 aaPredicted RBP17.85■□□□□ 0.45
CT55-201ENST00000276241 EIF4A1P60842 406 aaKnown RBP17.85■□□□□ 0.45
CT55-201ENST00000276241 WWC3Q9ULE0 1092 aa17.85■□□□□ 0.45
CT55-201ENST00000276241 BCORQ6W2J9 1755 aa17.84■□□□□ 0.45
CT55-201ENST00000276241 DDR1Q08345 913 aa17.84■□□□□ 0.45
CT55-201ENST00000276241 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
CT55-201ENST00000276241 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
CT55-201ENST00000276241 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
CT55-201ENST00000276241 APAF1O14727 1248 aa17.83■□□□□ 0.45
CT55-201ENST00000276241 BCL2L12Q9HB09 334 aa17.83■□□□□ 0.45
CT55-201ENST00000276241 KIF13BQ9NQT8 1826 aa17.83■□□□□ 0.44
CT55-201ENST00000276241 BICDL1Q6ZP65 573 aa17.82■□□□□ 0.44
CT55-201ENST00000276241 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
CT55-201ENST00000276241 KIAA1551Q9HCM1 1747 aa17.82■□□□□ 0.44
CT55-201ENST00000276241 SENP3-EIF4A1A0A087X0R7 540 aa17.81■□□□□ 0.44
CT55-201ENST00000276241 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
CT55-201ENST00000276241 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
CT55-201ENST00000276241 NFIXQ14938 502 aa17.81■□□□□ 0.44
CT55-201ENST00000276241 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
CT55-201ENST00000276241 N4BP2Q86UW6 1770 aaPredicted RBP17.8■□□□□ 0.44
CT55-201ENST00000276241 NBPF26B4DH59 902 aa17.8■□□□□ 0.44
CT55-201ENST00000276241 YBX3P16989 372 aaKnown RBP eCLIP17.8■□□□□ 0.444e-8■■□□□ 14.5
CT55-201ENST00000276241 TM4SF1P30408 202 aa17.8■□□□□ 0.44
CT55-201ENST00000276241 NBPF10Q6P3W6 841 aaKnown RBP17.8■□□□□ 0.44
CT55-201ENST00000276241 NBPF15Q8N660 670 aa17.8■□□□□ 0.44
CT55-201ENST00000276241 CAMTA2O94983 1202 aa17.79■□□□□ 0.44
CT55-201ENST00000276241 YY1P25490 414 aa17.79■□□□□ 0.44
CT55-201ENST00000276241 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
CT55-201ENST00000276241 NGEFQ8N5V2 710 aa17.78■□□□□ 0.44
CT55-201ENST00000276241 BABAM1Q9NWV8 329 aa17.78■□□□□ 0.44
CT55-201ENST00000276241 NRXN2Q9P2S2 1712 aa17.78■□□□□ 0.44
CT55-201ENST00000276241 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.44
CT55-201ENST00000276241 MYL6BP14649 208 aa17.77■□□□□ 0.44
CT55-201ENST00000276241 A0A0G2JLW4 131 aa17.76■□□□□ 0.43
CT55-201ENST00000276241 SERPINB2P05120 415 aa17.76■□□□□ 0.43
CT55-201ENST00000276241 EIF2S2P20042 333 aaKnown RBP17.76■□□□□ 0.43
CT55-201ENST00000276241 KRT24Q2M2I5 525 aa17.76■□□□□ 0.43
CT55-201ENST00000276241 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
CT55-201ENST00000276241 CHL1O00533 1208 aa17.75■□□□□ 0.43
CT55-201ENST00000276241 DPEP1P16444 411 aa17.75■□□□□ 0.43
CT55-201ENST00000276241 TGFB2P61812 414 aa17.75■□□□□ 0.43
CT55-201ENST00000276241 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
CT55-201ENST00000276241 ZNF652Q9Y2D9 606 aa17.74■□□□□ 0.43
CT55-201ENST00000276241 NPHP1O15259 732 aa17.73■□□□□ 0.43
CT55-201ENST00000276241 GRIN3BO60391 1043 aa17.73■□□□□ 0.43
CT55-201ENST00000276241 CFAP44Q96MT7 982 aa17.73■□□□□ 0.43
CT55-201ENST00000276241 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
CT55-201ENST00000276241 CHRNA5P30532 468 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
CT55-201ENST00000276241 KIF6Q6ZMV9 814 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 FAM9BQ8IZU0 186 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 BCS1LQ9Y276 419 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 ANXA1P04083 346 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 IFT57Q9NWB7 429 aa17.72■□□□□ 0.43
CT55-201ENST00000276241 PROSER3Q2NL68 480 aa17.71■□□□□ 0.43
CT55-201ENST00000276241 TTLL7Q6ZT98 887 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms