RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 FOXD1Q16676 465 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 ABCA10Q8WWZ4 1543 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 KIAA0586Q9BVV6 1533 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 SUDS3Q9H7L9 328 aaPredicted RBP5.71□□□□□ -1.5
HMCN1-201ENST00000271588 PPP1R1BQ9UD71 204 aaPredicted RBP5.71□□□□□ -1.5
HMCN1-201ENST00000271588 NPHP3Q7Z494 1330 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 VGLL3A8MV65 326 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 NT5C2P49902 561 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 TCP11L2Q8N4U5 519 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 PDILTQ8N807 584 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 RAPGEF4Q8WZA2 1011 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 TTC21BQ7Z4L5 1316 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 WDR66Q8TBY9 1149 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 CLIP2Q9UDT6 1046 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 ATP5DP30049 168 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 PRDM10Q9NQV6 1147 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 LIMCH1Q9UPQ0 1083 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 ATP8B1O43520 1251 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 IFT74Q96LB3 600 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 LNPKQ9C0E8 428 aa5.71□□□□□ -1.5
HMCN1-201ENST00000271588 VPS37DQ86XT2 251 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 LRRC45Q96CN5 670 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 PAIP2Q9BPZ3 127 aaKnown RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 BIVM-ERCC5R4GMW8 1640 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 CASQ1P31415 396 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 TRAK1Q9UPV9 953 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 MAP2K1Q02750 393 aaPredicted RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 TMED8Q6PL24 325 aaPredicted RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 TOP1P11387 765 aaKnown RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 ENOX2Q16206 610 aaKnown RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 LRSAM1Q6UWE0 723 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 SYNJ1O43426 1573 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 GPATCH11Q8N954 259 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 TMTC2Q8N394 836 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 LMBR1Q8WVP7 490 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 STK24Q9Y6E0 443 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 MRC2Q9UBG0 1479 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 SPC24Q8NBT2 197 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 RASAL2Q9UJF2 1139 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 PSME1Q06323 249 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 SLMAPQ14BN4 828 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 SARNPP82979 210 aaKnown RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 SLFN5Q08AF3 891 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 TWISTNBQ3B726 338 aaPredicted RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 RSRC1Q96IZ7 334 aaKnown RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 BUB1BO60566 1050 aaPredicted RBP5.7□□□□□ -1.5
HMCN1-201ENST00000271588 HSP90AB3PQ58FF7 597 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 KCNG4Q8TDN1 519 aa5.7□□□□□ -1.5
HMCN1-201ENST00000271588 EBAG9O00559 213 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 MIPOL1Q8TD10 442 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 TBC1D32Q96NH3 1257 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 NAP1L3Q99457 506 aaPredicted RBP5.69□□□□□ -1.5
HMCN1-201ENST00000271588 ANKRD36BQ8N2N9 1353 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 TSGA10Q9BZW7 698 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 AOX1Q06278 1338 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 NAIPQ13075 1403 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 VPS53Q5VIR6 699 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 FIBPO43427 364 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 KRT83P78385 493 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 PDRG1Q9NUG6 133 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 SCAF11Q99590 1463 aaKnown RBP5.69□□□□□ -1.5
HMCN1-201ENST00000271588 POGZQ7Z3K3 1410 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMCN1-201ENST00000271588 BCAP29Q9UHQ4 241 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 IQGAP2Q13576 1575 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 GIGYF1O75420 1035 aaPredicted RBP5.69□□□□□ -1.5
HMCN1-201ENST00000271588 PIK3C2GO75747 1445 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 SEPT6Q14141 434 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 SHANK2Q9UPX8 1470 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 IMPACTQ9P2X3 320 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 IRX4P78413 519 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 CCDC155Q8N6L0 562 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 EPRSP07814 1512 aaKnown RBP5.69□□□□□ -1.5
HMCN1-201ENST00000271588 PODNQ7Z5L7 613 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 LIG1P18858 919 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 CYLC1P35663 651 aaPredicted RBP5.69□□□□□ -1.5
HMCN1-201ENST00000271588 SAFB2Q14151 953 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMCN1-201ENST00000271588 EHMT1Q9H9B1 1298 aa5.69□□□□□ -1.5
HMCN1-201ENST00000271588 ZFYVE9O95405 1425 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMCN1-201ENST00000271588 KIAA1524Q8TCG1 905 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 KIF24Q5T7B8 1368 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 KIF4AO95239 1232 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 CFAP100Q494V2 611 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 DUSP27Q5VZP5 1158 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 CPSF2Q9P2I0 782 aaKnown RBP5.68□□□□□ -1.5
HMCN1-201ENST00000271588 SLU7O95391 586 aaKnown RBP5.68□□□□□ -1.5
HMCN1-201ENST00000271588 CACNA2D4Q7Z3S7 1137 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 BABAM1Q9NWV8 329 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 ZFYP08048 801 aaPredicted RBP5.68□□□□□ -1.5
HMCN1-201ENST00000271588 AMOTQ4VCS5 1084 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 SOGA3Q5TF21 947 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 TSKSQ9UJT2 592 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 GTF2A1P52655 376 aaPredicted RBP5.68□□□□□ -1.5
HMCN1-201ENST00000271588 ARMC9Q7Z3E5 817 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 SNW1Q13573 536 aaKnown RBP5.68□□□□□ -1.5
HMCN1-201ENST00000271588 CFAP58Q5T655 872 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 RASSF4Q9H2L5 321 aa5.68□□□□□ -1.5
HMCN1-201ENST00000271588 ATP2A1O14983 1001 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms