RNA–Protein interactions for RNA: ENST00000269051.8

RHBDL3-201, Transcript of rhomboid like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RHBDL3, Length 4,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-201ENST00000269051 CNPY2Q9Y2B0 182 aa14.29□□□□□ -0.12
RHBDL3-201ENST00000269051 A0A1W2PP64 1363 aa14.29□□□□□ -0.12
RHBDL3-201ENST00000269051 HMGB1P09429 215 aaKnown RBP14.29□□□□□ -0.12
RHBDL3-201ENST00000269051 FAM200AQ8TCP9 573 aa14.29□□□□□ -0.12
RHBDL3-201ENST00000269051 RHPN1Q8TCX5 695 aa14.29□□□□□ -0.12
RHBDL3-201ENST00000269051 ZNF830Q96NB3 372 aaPredicted RBP14.29□□□□□ -0.12
RHBDL3-201ENST00000269051 LEKR1Q6ZMV7 388 aa14.28□□□□□ -0.12
RHBDL3-201ENST00000269051 ANTXR1Q9H6X2 564 aa14.28□□□□□ -0.12
RHBDL3-201ENST00000269051 BOLA2Q9H3K6 86 aa14.28□□□□□ -0.12
RHBDL3-201ENST00000269051 DDX54Q8TDD1 881 aaKnown RBP14.28□□□□□ -0.12
RHBDL3-201ENST00000269051 PIK3R4Q99570 1358 aa14.28□□□□□ -0.12
RHBDL3-201ENST00000269051 PTPRTO14522 1441 aa14.28□□□□□ -0.12
RHBDL3-201ENST00000269051 F13A1P00488 732 aa14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 GSDMDP57764 484 aa14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 MARCH6O60337 910 aa14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 CDKL5O76039 1030 aa14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 PHACTR3Q96KR7 559 aa14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 RUFY1Q96T51 708 aa14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 TFIP11Q9UBB9 837 aaKnown RBP14.27□□□□□ -0.12
RHBDL3-201ENST00000269051 TMCO3Q6UWJ1 677 aa14.27□□□□□ -0.13
RHBDL3-201ENST00000269051 TTC12Q9H892 705 aaPredicted RBP14.27□□□□□ -0.13
RHBDL3-201ENST00000269051 ERLIN1O75477 346 aa14.27□□□□□ -0.13
RHBDL3-201ENST00000269051 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.27□□□□□ -0.13
RHBDL3-201ENST00000269051 ARHGEF5Q12774 1597 aa14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 PPFIBP1Q86W92 1011 aa14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 PBRM1Q86U86 1689 aa14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 GTF2E1P29083 439 aaPredicted RBP14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 TTC39AQ5SRH9 613 aa14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 PPP1R9BQ96SB3 815 aa14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 DBF4Q9UBU7 674 aaPredicted RBP14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 STX1AQ16623 288 aa14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 LMBRD1Q9NUN5 540 aa14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 HMG20BQ9P0W2 317 aa14.26□□□□□ -0.13
RHBDL3-201ENST00000269051 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 EIF3JO75822 258 aaKnown RBP14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 LARP1Q6PKG0 1096 aaKnown RBP14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 CCDC94Q9BW85 323 aaPredicted RBP14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 ZSCAN12O43309 604 aa14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 ATP2B1P20020 1258 aa14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 CFAP100Q494V2 611 aa14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 FAM177A1Q8N128 213 aaPredicted RBP14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 SLC26A8Q96RN1 970 aa14.25□□□□□ -0.13
RHBDL3-201ENST00000269051 MYL6BP14649 208 aa14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 TATP17735 454 aaPredicted RBP14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 CHMLP26374 656 aa14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 ESCO1Q5FWF5 840 aa14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 TRIM22Q8IYM9 498 aa14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 ZSCAN16Q9H4T2 348 aaPredicted RBP14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 KDM5DQ9BY66 1539 aa14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 FBXO31Q5XUX0 539 aaPredicted RBP14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 CCDC8Q9H0W5 538 aaPredicted RBP14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 SBNO2Q9Y2G9 1366 aa14.24□□□□□ -0.13
RHBDL3-201ENST00000269051 CCDC171Q6TFL3 1326 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 KDM4AO75164 1064 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 TTLL5Q6EMB2 1281 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 CCDC186Q7Z3E2 898 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 CEP135Q66GS9 1140 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 ZSCAN25Q6NSZ9 544 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 THEMISQ8N1K5 641 aaPredicted RBP14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 ZHX1Q9UKY1 873 aaPredicted RBP14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 DNM1Q05193 864 aaKnown RBP14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 IMMTQ16891 758 aaKnown RBP14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 CAGE1Q8TC20 777 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 CEP126Q9P2H0 1117 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 WDR7Q9Y4E6 1490 aa14.23□□□□□ -0.13
RHBDL3-201ENST00000269051 SYNMO15061 1565 aa14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 KDM5AP29375 1690 aaKnown RBP14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 TRMT1Q9NXH9 659 aaKnown RBP14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 EIF4G3O43432 1585 aaKnown RBP14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 EVA1CP58658 441 aa14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 AMOTQ4VCS5 1084 aa14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 FSIP1Q8NA03 581 aa14.22□□□□□ -0.13
RHBDL3-201ENST00000269051 PI4KAP2A4QPH2 592 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 ERICH4A6NGS2 130 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 FKBP4Q02790 459 aaKnown RBP eCLIP14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 PI4KAP1Q8N8J0 262 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 KCNH5Q8NCM2 988 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 HYPKQ9NX55 129 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 BRPF1P55201 1214 aaPredicted RBP14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 ANO6Q4KMQ2 910 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 CALCOCO1Q9P1Z2 691 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 DENND4BO75064 1496 aaPredicted RBP14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 AK2P54819 239 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 EIF4A2Q14240 407 aaKnown RBP14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 HSP90AB2PQ58FF8 381 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 C8orf76Q96K31 380 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 NEK1Q96PY6 1258 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 ABCC10Q5T3U5 1492 aa14.21□□□□□ -0.13
RHBDL3-201ENST00000269051 CEP170Q5SW79 1584 aa14.21□□□□□ -0.14
RHBDL3-201ENST00000269051 DACT1Q9NYF0 836 aa14.21□□□□□ -0.14
RHBDL3-201ENST00000269051 KIF24Q5T7B8 1368 aa14.21□□□□□ -0.14
RHBDL3-201ENST00000269051 VPS37DQ86XT2 251 aa14.2□□□□□ -0.14
RHBDL3-201ENST00000269051 NECAB1Q8N987 351 aa14.2□□□□□ -0.14
RHBDL3-201ENST00000269051 GTPBP4Q9BZE4 634 aaKnown RBP14.2□□□□□ -0.14
RHBDL3-201ENST00000269051 BCORL1Q5H9F3 1711 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms